11-64453140-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453140
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453140
    reference: chr 11
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1272G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1130G>A
  hgvsp: ENSP00000366774.1:p.Arg377Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.412G>A
  hgvsp: ENSP00000411271.1:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1130G>A
  hgvsp: ENSP00000265459.5:p.Arg377Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1130G>A
  hgvsp: ENSP00000386416.1:p.Arg377Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.443G>A
  hgvsp: ENSP00000388971.1:p.Arg148Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.498G>A
  hgvsp: ENSP00000412211.1:p.Arg167Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1058G>A
  hgvsp: ENSP00000366782.3:p.Arg353Gln
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg377Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-64453147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453147
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453147
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.436G>A
  hgvsp: ENSP00000388971.1:p.Asp146Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1123G>A
  hgvsp: ENSP00000386416.1:p.Asp375Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1123G>A
  hgvsp: ENSP00000265459.5:p.Asp375Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1123G>A
  hgvsp: ENSP00000366774.1:p.Asp375Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1051G>A
  hgvsp: ENSP00000366782.3:p.Asp351Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.491G>A
  hgvsp: ENSP00000412211.1:p.Asp165Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.405G>A
  hgvsp: ENSP00000411271.1:p.Asp136Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1265G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33896
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp375Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

11-64453148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453148
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453148
    reference: chr 11
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1264C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1122C>T
  hgvsp: ENST00000265459.6:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1122C>T
  hgvsp: ENST00000377551.1:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1050C>T
  hgvsp: ENST00000377559.3:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.404C>T
  hgvsp: ENST00000417749.1:c.404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.435C>T
  hgvsp: ENST00000442300.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.490C>T
  hgvsp: ENST00000437746.1:c.490C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1122C>T
  hgvsp: ENST00000409571.1:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2455
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His374His
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

11-64453154-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453154
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453154
    reference: chr 11
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1116C>G
  hgvsp: ENST00000377551.1:c.1116C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.398C>G
  hgvsp: ENST00000417749.1:c.398C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.429C>G
  hgvsp: ENST00000442300.1:c.429C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1116C>G
  hgvsp: ENST00000409571.1:c.1116C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1258C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1116C>G
  hgvsp: ENST00000265459.6:c.1116C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.484C>G
  hgvsp: ENST00000437746.1:c.484C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1044C>G
  hgvsp: ENST00000377559.3:c.1044C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2455
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9041
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33905
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala372Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

11-64453155-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453155
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453155
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.397C>G
  hgvsp: ENSP00000411271.1:p.Ala133Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1115C>G
  hgvsp: ENSP00000386416.1:p.Ala372Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1043C>G
  hgvsp: ENSP00000366782.3:p.Ala348Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1257C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.483C>G
  hgvsp: ENSP00000412211.1:p.Ala162Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1115C>G
  hgvsp: ENSP00000265459.5:p.Ala372Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1115C>G
  hgvsp: ENSP00000366774.1:p.Ala372Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.428C>G
  hgvsp: ENSP00000388971.1:p.Ala143Gly
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25811
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33908
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala372Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

11-64453156-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453156
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453156
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1114G>A
  hgvsp: ENSP00000386416.1:p.Ala372Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1042G>A
  hgvsp: ENSP00000366782.3:p.Ala348Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.482G>A
  hgvsp: ENSP00000412211.1:p.Ala162Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1114G>A
  hgvsp: ENSP00000366774.1:p.Ala372Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.427G>A
  hgvsp: ENSP00000388971.1:p.Ala143Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.396G>A
  hgvsp: ENSP00000411271.1:p.Ala133Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1256G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1114G>A
  hgvsp: ENSP00000265459.5:p.Ala372Thr
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala372Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

11-64453157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453157
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453157
    reference: chr 11
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.426C>T
  hgvsp: ENST00000442300.1:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1255C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1041C>T
  hgvsp: ENST00000377559.3:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.481C>T
  hgvsp: ENST00000437746.1:c.481C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1113C>T
  hgvsp: ENST00000409571.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1113C>T
  hgvsp: ENST00000265459.6:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.395C>T
  hgvsp: ENST00000417749.1:c.395C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1113C>T
  hgvsp: ENST00000377551.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9587
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Asn371Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

11-64453163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453163
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453163
    reference: chr 11
allele count: 30
allele frequency: 2.470925443942938e-4
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1107C>T
  hgvsp: ENST00000377551.1:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.420C>T
  hgvsp: ENST00000442300.1:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.475C>T
  hgvsp: ENST00000437746.1:c.475C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1035C>T
  hgvsp: ENST00000377559.3:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1249C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.389C>T
  hgvsp: ENST00000417749.1:c.389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1107C>T
  hgvsp: ENST00000409571.1:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1107C>T
  hgvsp: ENST00000265459.6:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn369Asn
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-64453164-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453164
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453164
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.388A>G
  hgvsp: ENSP00000411271.1:p.Asn130Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1248A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1106A>G
  hgvsp: ENSP00000265459.5:p.Asn369Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.474A>G
  hgvsp: ENSP00000412211.1:p.Asn159Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1106A>G
  hgvsp: ENSP00000366774.1:p.Asn369Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.419A>G
  hgvsp: ENSP00000388971.1:p.Asn140Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1106A>G
  hgvsp: ENSP00000386416.1:p.Asn369Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1034A>G
  hgvsp: ENSP00000366782.3:p.Asn345Ser
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn369Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-64453176-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453176
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453176
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1094A>G
  hgvsp: ENSP00000265459.5:p.Asn365Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1094A>G
  hgvsp: ENSP00000366774.1:p.Asn365Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1236A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.462A>G
  hgvsp: ENSP00000412211.1:p.Asn155Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.376A>G
  hgvsp: ENSP00000411271.1:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1022A>G
  hgvsp: ENSP00000366782.3:p.Asn341Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1094A>G
  hgvsp: ENSP00000386416.1:p.Asn365Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.407A>G
  hgvsp: ENSP00000388971.1:p.Asn136Ser
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn365Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-64453180-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453180
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453180
    reference: chr 11
allele count: 96
allele frequency: 7.906961420617402e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.458G>A
  hgvsp: ENSP00000412211.1:p.Val154Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1090G>A
  hgvsp: ENSP00000366774.1:p.Val364Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.372G>A
  hgvsp: ENSP00000411271.1:p.Val125Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1018G>A
  hgvsp: ENSP00000366782.3:p.Val340Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1090G>A
  hgvsp: ENSP00000386416.1:p.Val364Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1232G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1090G>A
  hgvsp: ENSP00000265459.5:p.Val364Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.403G>A
  hgvsp: ENSP00000388971.1:p.Val135Ile
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val364Ile
num of homozygotes: 2
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

11-64453181-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453181
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453181
    reference: chr 11
allele count: 118
allele frequency: 9.718973412842223e-4
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1017C>T
  hgvsp: ENST00000377559.3:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.371C>T
  hgvsp: ENST00000417749.1:c.371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.457C>T
  hgvsp: ENST00000437746.1:c.457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1089C>T
  hgvsp: ENST00000265459.6:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1089C>T
  hgvsp: ENST00000409571.1:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.402C>T
  hgvsp: ENST00000442300.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1089C>T
  hgvsp: ENST00000377551.1:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1231C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 9.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9537
  bin: 9.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro363Pro
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-64453183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453183
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453183
    reference: chr 11
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.369C>T
  hgvsp: ENSP00000411271.1:p.Pro124Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1087C>T
  hgvsp: ENSP00000265459.5:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1229C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.455C>T
  hgvsp: ENSP00000412211.1:p.Pro153Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1087C>T
  hgvsp: ENSP00000386416.1:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1015C>T
  hgvsp: ENSP00000366782.3:p.Pro339Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1087C>T
  hgvsp: ENSP00000366774.1:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.400C>T
  hgvsp: ENSP00000388971.1:p.Pro134Ser
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro363Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

11-64453193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453193
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453193
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1077C>T
  hgvsp: ENST00000377551.1:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.359C>T
  hgvsp: ENST00000417749.1:c.359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1219C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.445C>T
  hgvsp: ENST00000437746.1:c.445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1077C>T
  hgvsp: ENST00000265459.6:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.390C>T
  hgvsp: ENST00000442300.1:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1077C>T
  hgvsp: ENST00000409571.1:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1005C>T
  hgvsp: ENST00000377559.3:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala359Ala
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64453195-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453195
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453195
    reference: chr 11
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.357G>T
  hgvsp: ENSP00000411271.1:p.Ala120Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1075G>T
  hgvsp: ENSP00000386416.1:p.Ala359Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.443G>T
  hgvsp: ENSP00000412211.1:p.Ala149Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1075G>T
  hgvsp: ENSP00000366774.1:p.Ala359Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1217G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.388G>T
  hgvsp: ENSP00000388971.1:p.Ala130Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.1003G>T
  hgvsp: ENSP00000366782.3:p.Ala335Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1075G>T
  hgvsp: ENSP00000265459.5:p.Ala359Ser
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala359Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

11-64453199-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453199
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453199
    reference: chr 11
allele count: 8
allele frequency: 6.589134517181169e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.384C>T
  hgvsp: ENST00000442300.1:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1213C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1071C>T
  hgvsp: ENST00000377551.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.439C>T
  hgvsp: ENST00000437746.1:c.439C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.999C>T
  hgvsp: ENST00000377559.3:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.353C>T
  hgvsp: ENST00000417749.1:c.353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1071C>T
  hgvsp: ENST00000265459.6:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1071C>T
  hgvsp: ENST00000409571.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe357Phe
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-64453205-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453205
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453205
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.347T>G
  hgvsp: ENST00000417749.1:c.347T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1207T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.993T>G
  hgvsp: ENST00000377559.3:c.993T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1065T>G
  hgvsp: ENST00000265459.6:c.1065T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1065T>G
  hgvsp: ENST00000377551.1:c.1065T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.433T>G
  hgvsp: ENST00000437746.1:c.433T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.378T>G
  hgvsp: ENST00000442300.1:c.378T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1065T>G
  hgvsp: ENST00000409571.1:c.1065T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9073
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly355Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-64453211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453211
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453211
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.427C>T
  hgvsp: ENST00000437746.1:c.427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1059C>T
  hgvsp: ENST00000377551.1:c.1059C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.341C>T
  hgvsp: ENST00000417749.1:c.341C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1059C>T
  hgvsp: ENST00000409571.1:c.1059C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1059C>T
  hgvsp: ENST00000265459.6:c.1059C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.987C>T
  hgvsp: ENST00000377559.3:c.987C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1201C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.372C>T
  hgvsp: ENST00000442300.1:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9410
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly353Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

11-64453218-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453218
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453218
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1052A>G
  hgvsp: ENSP00000386416.1:p.Asn351Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.420A>G
  hgvsp: ENSP00000412211.1:p.Asn141Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1052A>G
  hgvsp: ENSP00000265459.5:p.Asn351Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.365A>G
  hgvsp: ENSP00000388971.1:p.Asn122Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1194A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.980A>G
  hgvsp: ENSP00000366782.3:p.Asn327Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.334A>G
  hgvsp: ENSP00000411271.1:p.Asn112Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1052A>G
  hgvsp: ENSP00000366774.1:p.Asn351Ser
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn351Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

11-64453237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453237
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453237
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1175G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.401G>A
  hgvsp: ENSP00000412211.1:p.Ala135Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1033G>A
  hgvsp: ENSP00000265459.5:p.Ala345Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.315G>A
  hgvsp: ENSP00000411271.1:p.Ala106Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1033G>A
  hgvsp: ENSP00000366774.1:p.Ala345Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.961G>A
  hgvsp: ENSP00000366782.3:p.Ala321Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.346G>A
  hgvsp: ENSP00000388971.1:p.Ala116Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1033G>A
  hgvsp: ENSP00000386416.1:p.Ala345Thr
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala345Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

11-64453244-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453244
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453244
    reference: chr 11
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1026G>A
  hgvsp: ENST00000409571.1:c.1026G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.308G>A
  hgvsp: ENST00000417749.1:c.308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.394G>A
  hgvsp: ENST00000437746.1:c.394G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1026G>A
  hgvsp: ENST00000377551.1:c.1026G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.339G>A
  hgvsp: ENST00000442300.1:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1026G>A
  hgvsp: ENST00000265459.6:c.1026G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.954G>A
  hgvsp: ENST00000377559.3:c.954G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1168G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9408
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Lys342Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-64453255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453255
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453255
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1015C>T
  hgvsp: ENST00000265459.6:c.1015C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1015C>T
  hgvsp: ENST00000377551.1:c.1015C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.383C>T
  hgvsp: ENST00000437746.1:c.383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1157C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1015C>T
  hgvsp: ENST00000409571.1:c.1015C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.297C>T
  hgvsp: ENST00000417749.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.943C>T
  hgvsp: ENST00000377559.3:c.943C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.328C>T
  hgvsp: ENST00000442300.1:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9405
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34063
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu339Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

11-64453261-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453261
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453261
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.291G>A
  hgvsp: ENSP00000411271.1:p.Val98Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.377G>A
  hgvsp: ENSP00000412211.1:p.Val127Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1009G>A
  hgvsp: ENSP00000265459.5:p.Val337Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1009G>A
  hgvsp: ENSP00000366774.1:p.Val337Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1151G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.322G>A
  hgvsp: ENSP00000388971.1:p.Val108Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1009G>A
  hgvsp: ENSP00000386416.1:p.Val337Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.937G>A
  hgvsp: ENSP00000366782.3:p.Val313Ile
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34064
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val337Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

11-64453262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453262
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453262
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1150C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1008C>T
  hgvsp: ENST00000265459.6:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.936C>T
  hgvsp: ENST00000377559.3:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1008C>T
  hgvsp: ENST00000409571.1:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.290C>T
  hgvsp: ENST00000417749.1:c.290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.321C>T
  hgvsp: ENST00000442300.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1008C>T
  hgvsp: ENST00000377551.1:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.376C>T
  hgvsp: ENST00000437746.1:c.376C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34067
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr336Tyr
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

11-64453267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453267
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453267
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1003G>A
  hgvsp: ENSP00000386416.1:p.Asp335Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1003G>A
  hgvsp: ENSP00000366774.1:p.Asp335Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1145G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.316G>A
  hgvsp: ENSP00000388971.1:p.Asp106Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.285G>A
  hgvsp: ENSP00000411271.1:p.Asp96Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.371G>A
  hgvsp: ENSP00000412211.1:p.Asp125Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.931G>A
  hgvsp: ENSP00000366782.3:p.Asp311Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1003G>A
  hgvsp: ENSP00000265459.5:p.Asp335Asn
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp335Asn
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

11-64453268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453268
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453268
    reference: chr 11
allele count: 866
allele frequency: 7.13297311544544e-3
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.1002C>T
  hgvsp: ENST00000377551.1:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.315C>T
  hgvsp: ENST00000442300.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.1002C>T
  hgvsp: ENST00000409571.1:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1144C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.1002C>T
  hgvsp: ENST00000265459.6:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.930C>T
  hgvsp: ENST00000377559.3:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.370C>T
  hgvsp: ENST00000437746.1:c.370C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.284C>T
  hgvsp: ENST00000417749.1:c.284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 9.75e1
  variant carriers: 768
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala334Ala
num of homozygotes: 34
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-64453271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453271
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453271
    reference: chr 11
allele count: 12
allele frequency: 9.883701775771753e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.999G>A
  hgvsp: ENST00000377551.1:c.999G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.281G>A
  hgvsp: ENST00000417749.1:c.281G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.312G>A
  hgvsp: ENST00000442300.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.367G>A
  hgvsp: ENST00000437746.1:c.367G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1141G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.999G>A
  hgvsp: ENST00000409571.1:c.999G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.927G>A
  hgvsp: ENST00000377559.3:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.999G>A
  hgvsp: ENST00000265459.6:c.999G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34513
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser333Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

11-64453272-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453272
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453272
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.998C>T
  hgvsp: ENSP00000366774.1:p.Ser333Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1140C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.998C>T
  hgvsp: ENSP00000386416.1:p.Ser333Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.998C>T
  hgvsp: ENSP00000265459.5:p.Ser333Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.366C>T
  hgvsp: ENSP00000412211.1:p.Ser123Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.280C>T
  hgvsp: ENSP00000411271.1:p.Ser94Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.311C>T
  hgvsp: ENSP00000388971.1:p.Ser104Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.926C>T
  hgvsp: ENSP00000366782.3:p.Ser309Leu
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser333Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-64453274-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453274
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453274
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.278G>A
  hgvsp: ENST00000417749.1:c.278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.996G>A
  hgvsp: ENST00000409571.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.364G>A
  hgvsp: ENST00000437746.1:c.364G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.309G>A
  hgvsp: ENST00000442300.1:c.309G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.996G>A
  hgvsp: ENST00000377551.1:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.924G>A
  hgvsp: ENST00000377559.3:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1138G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.996G>A
  hgvsp: ENST00000265459.6:c.996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys332Lys
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

11-64453294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453294
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453294
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.904C>T
  hgvsp: ENST00000377559.3:c.904C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.976C>T
  hgvsp: ENST00000377551.1:c.976C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.976C>T
  hgvsp: ENST00000409571.1:c.976C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.289C>T
  hgvsp: ENST00000442300.1:c.289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.976C>T
  hgvsp: ENST00000265459.6:c.976C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.344C>T
  hgvsp: ENST00000437746.1:c.344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.258C>T
  hgvsp: ENST00000417749.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1118C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu326Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

11-64453298-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453298
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453298
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.972C>T
  hgvsp: ENST00000377551.1:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.285C>T
  hgvsp: ENST00000442300.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.972C>T
  hgvsp: ENST00000265459.6:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1114C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.340C>T
  hgvsp: ENST00000437746.1:c.340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.900C>T
  hgvsp: ENST00000377559.3:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.972C>T
  hgvsp: ENST00000409571.1:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.254C>T
  hgvsp: ENST00000417749.1:c.254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8821
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn324Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

11-64453301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453301
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453301
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.969C>T
  hgvsp: ENST00000377551.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.969C>T
  hgvsp: ENST00000265459.6:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.251C>T
  hgvsp: ENST00000417749.1:c.251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.337C>T
  hgvsp: ENST00000437746.1:c.337C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1111C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.969C>T
  hgvsp: ENST00000409571.1:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.897C>T
  hgvsp: ENST00000377559.3:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.282C>T
  hgvsp: ENST00000442300.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg323Arg
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

11-64453302-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453302
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453302
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.896G>C
  hgvsp: ENSP00000366782.3:p.Arg299Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.968G>C
  hgvsp: ENSP00000366774.1:p.Arg323Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.336G>C
  hgvsp: ENSP00000412211.1:p.Arg113Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.250G>C
  hgvsp: ENSP00000411271.1:p.Arg84Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.968G>C
  hgvsp: ENSP00000386416.1:p.Arg323Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.968G>C
  hgvsp: ENSP00000265459.5:p.Arg323Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1110G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.281G>C
  hgvsp: ENSP00000388971.1:p.Arg94Pro
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34526
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg323Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

11-64453303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453303
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453303
    reference: chr 11
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.895C>T
  hgvsp: ENSP00000366782.3:p.Arg299Cys
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.967C>T
  hgvsp: ENSP00000366774.1:p.Arg323Cys
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.249C>T
  hgvsp: ENSP00000411271.1:p.Arg84Cys
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.335C>T
  hgvsp: ENSP00000412211.1:p.Arg113Cys
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1109C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.967C>T
  hgvsp: ENSP00000386416.1:p.Arg323Cys
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.967C>T
  hgvsp: ENSP00000265459.5:p.Arg323Cys
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.280C>T
  hgvsp: ENSP00000388971.1:p.Arg94Cys
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg323Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-64453305-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453305
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453305
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.247A>G
  hgvsp: ENSP00000411271.1:p.Gln83Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1107A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.333A>G
  hgvsp: ENSP00000412211.1:p.Gln112Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.965A>G
  hgvsp: ENSP00000265459.5:p.Gln322Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.965A>G
  hgvsp: ENSP00000366774.1:p.Gln322Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.893A>G
  hgvsp: ENSP00000366782.3:p.Gln298Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.965A>G
  hgvsp: ENSP00000386416.1:p.Gln322Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.278A>G
  hgvsp: ENSP00000388971.1:p.Gln93Arg
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9184
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln322Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-64453307-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453307
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453307
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.963G>A
  hgvsp: ENST00000377551.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.276G>A
  hgvsp: ENST00000442300.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.331G>A
  hgvsp: ENST00000437746.1:c.331G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.963G>A
  hgvsp: ENST00000265459.6:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1105G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.891G>A
  hgvsp: ENST00000377559.3:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.245G>A
  hgvsp: ENST00000417749.1:c.245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.963G>A
  hgvsp: ENST00000409571.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu321Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

11-64453314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453314
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453314
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.956G>A
  hgvsp: ENSP00000265459.5:p.Arg319His
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1098G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.956G>A
  hgvsp: ENSP00000386416.1:p.Arg319His
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.324G>A
  hgvsp: ENSP00000412211.1:p.Arg109His
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.238G>A
  hgvsp: ENSP00000411271.1:p.Arg80His
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.269G>A
  hgvsp: ENSP00000388971.1:p.Arg90His
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.956G>A
  hgvsp: ENSP00000366774.1:p.Arg319His
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.884G>A
  hgvsp: ENSP00000366782.3:p.Arg295His
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8815
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Arg319His
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

11-64453324-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453324
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453324
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.946C>G
  hgvsp: ENSP00000366774.1:p.Leu316Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.228C>G
  hgvsp: ENSP00000411271.1:p.Leu77Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.314C>G
  hgvsp: ENSP00000412211.1:p.Leu106Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.946C>G
  hgvsp: ENSP00000265459.5:p.Leu316Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1088C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.874C>G
  hgvsp: ENSP00000366782.3:p.Leu292Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.259C>G
  hgvsp: ENSP00000388971.1:p.Leu87Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.946C>G
  hgvsp: ENSP00000386416.1:p.Leu316Val
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8815
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu316Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

11-64453330-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453330
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453330
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.222A>T
  hgvsp: ENSP00000411271.1:p.Ile75Phe
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1082A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.940A>T
  hgvsp: ENSP00000386416.1:p.Ile314Phe
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.253A>T
  hgvsp: ENSP00000388971.1:p.Ile85Phe
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.940A>T
  hgvsp: ENSP00000366774.1:p.Ile314Phe
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.308A>T
  hgvsp: ENSP00000412211.1:p.Ile104Phe
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.940A>T
  hgvsp: ENSP00000265459.5:p.Ile314Phe
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.868A>T
  hgvsp: ENSP00000366782.3:p.Ile290Phe
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9181
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile314Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

11-64453337-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453337
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453337
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.933T>C
  hgvsp: ENST00000265459.6:c.933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1075T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.246T>C
  hgvsp: ENST00000442300.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.861T>C
  hgvsp: ENST00000377559.3:c.861T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.933T>C
  hgvsp: ENST00000377551.1:c.933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.215T>C
  hgvsp: ENST00000417749.1:c.215T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.301T>C
  hgvsp: ENST00000437746.1:c.301T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.933T>C
  hgvsp: ENST00000409571.1:c.933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr311Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

11-64453342-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453342
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453342
    reference: chr 11
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1070A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.210A>G
  hgvsp: ENSP00000411271.1:p.Ser71Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.928A>G
  hgvsp: ENSP00000265459.5:p.Ser310Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.928A>G
  hgvsp: ENSP00000386416.1:p.Ser310Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.296A>G
  hgvsp: ENSP00000412211.1:p.Ser100Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.928A>G
  hgvsp: ENSP00000366774.1:p.Ser310Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.241A>G
  hgvsp: ENSP00000388971.1:p.Ser81Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.856A>G
  hgvsp: ENSP00000366782.3:p.Ser286Gly
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14440
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser310Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

11-64453346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453346
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453346
    reference: chr 11
allele count: 52
allele frequency: 4.28293743616776e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.924G>A
  hgvsp: ENST00000409571.1:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.852G>A
  hgvsp: ENST00000377559.3:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.237G>A
  hgvsp: ENST00000442300.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.924G>A
  hgvsp: ENST00000265459.6:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.292G>A
  hgvsp: ENST00000437746.1:c.292G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1066G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.924G>A
  hgvsp: ENST00000377551.1:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.206G>A
  hgvsp: ENST00000417749.1:c.206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8811
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln308Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

11-64453358-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453358
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453358
    reference: chr 11
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.912C>G
  hgvsp: ENSP00000265459.5:p.His304Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.225C>G
  hgvsp: ENSP00000388971.1:p.His75Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.280C>G
  hgvsp: ENSP00000412211.1:p.His94Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1054C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.194C>G
  hgvsp: ENSP00000411271.1:p.His65Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.912C>G
  hgvsp: ENSP00000366774.1:p.His304Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.912C>G
  hgvsp: ENSP00000386416.1:p.His304Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.840C>G
  hgvsp: ENSP00000366782.3:p.His280Gln
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His304Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-64453359-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453359
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453359
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.839A>T
  hgvsp: ENSP00000366782.3:p.His280Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.911A>T
  hgvsp: ENSP00000386416.1:p.His304Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.224A>T
  hgvsp: ENSP00000388971.1:p.His75Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1053A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.279A>T
  hgvsp: ENSP00000412211.1:p.His94Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.193A>T
  hgvsp: ENSP00000411271.1:p.His65Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.911A>T
  hgvsp: ENSP00000265459.5:p.His304Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.911A>T
  hgvsp: ENSP00000366774.1:p.His304Leu
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8769
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His304Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS

11-64453370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453370
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453370
    reference: chr 11
allele count: 3
allele frequency: 2.471291826614165e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.182C>T
  hgvsp: ENST00000417749.1:c.182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.900C>T
  hgvsp: ENST00000409571.1:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.900C>T
  hgvsp: ENST00000265459.6:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1042C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.900C>T
  hgvsp: ENST00000377551.1:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.213C>T
  hgvsp: ENST00000442300.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.268C>T
  hgvsp: ENST00000437746.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.828C>T
  hgvsp: ENST00000377559.3:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr300Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-64453374-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453374
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453374
    reference: chr 11
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.896G>C
  hgvsp: ENSP00000265459.5:p.Cys299Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.209G>C
  hgvsp: ENSP00000388971.1:p.Cys70Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.896G>C
  hgvsp: ENSP00000386416.1:p.Cys299Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.824G>C
  hgvsp: ENSP00000366782.3:p.Cys275Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.264G>C
  hgvsp: ENSP00000412211.1:p.Cys89Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.178G>C
  hgvsp: ENSP00000411271.1:p.Cys60Ser
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1038G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.896G>C
  hgvsp: ENSP00000366774.1:p.Cys299Ser
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34531
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys299Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-64453376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453376
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453376
    reference: chr 11
allele count: 25
allele frequency: 2.059511648597885e-4
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.894C>T
  hgvsp: ENST00000265459.6:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1036C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.822C>T
  hgvsp: ENST00000377559.3:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.176C>T
  hgvsp: ENST00000417749.1:c.176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.207C>T
  hgvsp: ENST00000442300.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.262C>T
  hgvsp: ENST00000437746.1:c.262C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.894C>T
  hgvsp: ENST00000377551.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.894C>T
  hgvsp: ENST00000409571.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 14451
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9182
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe298Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-64453376-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453376
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453376
    reference: chr 11
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.894C>G
  hgvsp: ENSP00000265459.5:p.Phe298Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.207C>G
  hgvsp: ENSP00000388971.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.822C>G
  hgvsp: ENSP00000366782.3:p.Phe274Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.262C>G
  hgvsp: ENSP00000412211.1:p.Phe88Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.894C>G
  hgvsp: ENSP00000366774.1:p.Phe298Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.176C>G
  hgvsp: ENSP00000411271.1:p.Phe59Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.894C>G
  hgvsp: ENSP00000386416.1:p.Phe298Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1036C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe298Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

11-64453385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453385
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453385
    reference: chr 11
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1027T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.885T>C
  hgvsp: ENST00000409571.1:c.885T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.885T>C
  hgvsp: ENST00000265459.6:c.885T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.885T>C
  hgvsp: ENST00000377551.1:c.885T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.253T>C
  hgvsp: ENST00000437746.1:c.253T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.198T>C
  hgvsp: ENST00000442300.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.167T>C
  hgvsp: ENST00000417749.1:c.167T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.813T>C
  hgvsp: ENST00000377559.3:c.813T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34519
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9184
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn295Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

11-64453387-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453387
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453387
    reference: chr 11
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.165A>G
  hgvsp: ENSP00000411271.1:p.Asn56Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.883A>G
  hgvsp: ENSP00000366774.1:p.Asn295Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.883A>G
  hgvsp: ENSP00000386416.1:p.Asn295Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1025A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.811A>G
  hgvsp: ENSP00000366782.3:p.Asn271Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.883A>G
  hgvsp: ENSP00000265459.5:p.Asn295Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.251A>G
  hgvsp: ENSP00000412211.1:p.Asn85Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.196A>G
  hgvsp: ENSP00000388971.1:p.Asn66Asp
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9182
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn295Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

11-64453398-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453398
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453398
    reference: chr 11
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.872C>A
  hgvsp: ENSP00000366774.1:p.Thr291Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1014C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.872C>A
  hgvsp: ENSP00000265459.5:p.Thr291Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.185C>A
  hgvsp: ENSP00000388971.1:p.Thr62Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.872C>A
  hgvsp: ENSP00000386416.1:p.Thr291Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.240C>A
  hgvsp: ENSP00000412211.1:p.Thr81Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.154C>A
  hgvsp: ENSP00000411271.1:p.Thr52Asn
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.800C>A
  hgvsp: ENSP00000366782.3:p.Thr267Asn
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr291Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-64453400-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453400
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453400
    reference: chr 11
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.152G>A
  hgvsp: ENST00000417749.1:c.152G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.870G>A
  hgvsp: ENST00000377551.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1012G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.798G>A
  hgvsp: ENST00000377559.3:c.798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.870G>A
  hgvsp: ENST00000265459.6:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.870G>A
  hgvsp: ENST00000409571.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.183G>A
  hgvsp: ENST00000442300.1:c.183G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.238G>A
  hgvsp: ENST00000437746.1:c.238G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34457
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala290Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-64453406-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453406
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453406
    reference: chr 11
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1006T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.792T>A
  hgvsp: ENSP00000366782.3:p.Phe264Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.177T>A
  hgvsp: ENSP00000388971.1:p.Phe59Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.232T>A
  hgvsp: ENSP00000412211.1:p.Phe78Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.864T>A
  hgvsp: ENSP00000265459.5:p.Phe288Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.864T>A
  hgvsp: ENSP00000386416.1:p.Phe288Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.146T>A
  hgvsp: ENSP00000411271.1:p.Phe49Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.864T>A
  hgvsp: ENSP00000366774.1:p.Phe288Leu
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe288Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-64453407-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453407
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453407
    reference: chr 11
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.791T>A
  hgvsp: ENSP00000366782.3:p.Phe264Tyr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.863T>A
  hgvsp: ENSP00000265459.5:p.Phe288Tyr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.176T>A
  hgvsp: ENSP00000388971.1:p.Phe59Tyr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.231T>A
  hgvsp: ENSP00000412211.1:p.Phe78Tyr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.863T>A
  hgvsp: ENSP00000366774.1:p.Phe288Tyr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.863T>A
  hgvsp: ENSP00000386416.1:p.Phe288Tyr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1005T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.145T>A
  hgvsp: ENSP00000411271.1:p.Phe49Tyr
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8722
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe288Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

11-64453408-ACTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453408
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453405
    reference: chr 11
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.141_143delGAG
  hgvsp: ENSP00000411271.1:p.Glu48del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.172_174delGAG
  hgvsp: ENSP00000388971.1:p.Glu58del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.227_229delGAG
  hgvsp: ENSP00000412211.1:p.Glu77del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.1001_1003delGAG
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.859_861delGAG
  hgvsp: ENSP00000265459.5:p.Glu287del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.859_861delGAG
  hgvsp: ENSP00000386416.1:p.Glu287del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.859_861delGAG
  hgvsp: ENSP00000366774.1:p.Glu287del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.787_789delGAG
  hgvsp: ENSP00000366782.3:p.Glu263del
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 26212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8721
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu287del
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: ACTC
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-64453425-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453425
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453425
    reference: chr 11
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-6A>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-6A>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
hgvs: c.851-6A>T
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

11-64453426-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453426
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453426
    reference: chr 11
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-7C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-7C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8691
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.851-7C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64453427-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453427
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453427
    reference: chr 11
allele count: 2
allele frequency: 1.657742486282181e-5
allele num: 120646
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-8G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-8G>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7152
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8663
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
hgvs: c.851-8G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

11-64453428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453428
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453428
    reference: chr 11
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-9G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-9G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13715
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8652
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-64453429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453429
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453429
    reference: chr 11
allele count: 5
allele frequency: 4.147587762957064e-5
allele num: 120552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-10C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13604
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25402
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8641
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-64453432-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453432
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453432
    reference: chr 11
allele count: 1
allele frequency: 8.303303053954863e-6
allele num: 120434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-13C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8625
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8498
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-64453443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453443
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453443
    reference: chr 11
allele count: 4
allele frequency: 3.347616497054097e-5
allele num: 119488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-24G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-24G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21702
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3824
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

11-64453444-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453444
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453444
    reference: chr 11
allele count: 30
allele frequency: 2.512436560976835e-4
allele num: 119406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-25C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-25C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21746
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11127
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8613
  bin: 9.75e1
  variant carriers: 30
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

11-64453446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453446
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453446
    reference: chr 11
allele count: 1
allele frequency: 8.380262805041566e-6
allele num: 119328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-27C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-27C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8584
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP

11-64453448-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453448
    reference: chr 11
allele count: 1
allele frequency: 8.386447500838645e-6
allele num: 119240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-29C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-29C>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10019
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

11-64453460-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453460
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453460
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 117852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-41C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-41C>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

11-64453461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64453461
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64453461
    reference: chr 11
allele count: 1
allele frequency: 8.486514927779759e-6
allele num: 117834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.219-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.851-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.164-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.851-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.851-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.133-42C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.779-42C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5878
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

11-64457845-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64457845
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64457845
    reference: chr 11
allele count: 1
allele frequency: 1.199644905108088e-5
allele num: 83358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.850+32A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.778+2474A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.850+32A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.163+32A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.218+32A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-4426A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.132+32A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.850+32A>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4477
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-64457853-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64457853
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64457853
    reference: chr 11
allele count: 1
allele frequency: 1.168579241358356e-5
allele num: 85574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.850+24G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.132+24G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-4434G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.850+24G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.218+24G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.163+24G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.778+2466G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.850+24G>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

11-64457853-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64457853
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64457853
    reference: chr 11
allele count: 1
allele frequency: 1.168579241358356e-5
allele num: 85574
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.850+24G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.850+24G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.850+24G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.218+24G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.778+2466G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.132+24G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-4434G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.163+24G>C
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

11-64457856-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64457856
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64457856
    reference: chr 11
allele count: 1
allele frequency: 1.153721906871568e-5
allele num: 86676
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000411271
  ensembl transcript: ENST00000417749
  gene symbol: NRXN2
  hgvsc: ENST00000417749.1:c.132+21C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000388971
  ensembl transcript: ENST00000442300
  gene symbol: NRXN2
  hgvsc: ENST00000442300.1:c.163+21C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000412211
  ensembl transcript: ENST00000437746
  gene symbol: NRXN2
  hgvsc: ENST00000437746.1:c.218+21C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.778+2463C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.850+21C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.850+21C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000466324
  gene symbol: NRXN2
  hgvsc: ENST00000466324.1:n.993-4437C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.850+21C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 9595
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33895
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9039
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

DP
type: SiteQuality
SIO_000300: 2.112992e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9594
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2455
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.112944e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.346e0

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9594
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9042
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33901
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990110878034162e-5
allele num: 66740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.193e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.244e0

DP
type: SiteQuality
SIO_000300: 2.113419e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9590
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.15e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.006e0

DP
type: SiteQuality
SIO_000300: 2.113114e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.27e0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9588
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.868e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.112779e6

FS
type: SiteQuality
SIO_000300: 2.308e0

MQ
type: SiteQuality
SIO_000300: 5.88e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.112936e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.639e0

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

FS
type: SiteQuality
SIO_000300: 1.883e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.113e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 2.477e0

QD
type: SiteQuality
SIO_000300: 1.197e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.113199e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.547198082109679e-4
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.69e-2

DP
type: SiteQuality
SIO_000300: 2.115332e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

QD
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SIO_000300: 1.37e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.08e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.112204e6

MQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.091e0

VQSLOD
type: SiteQuality
SIO_000300: -1.686e-1

QD
type: SiteQuality
SIO_000300: 1.444e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.78e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 2.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.163e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.531e1

DP
type: SiteQuality
SIO_000300: 2.112207e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.87e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 1.381931248920366e-3
allele num: 11578
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.648856428983279e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.390770152831885e-4
allele num: 66740
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.814333232537043e-3
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 2.121724e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.094396164219358e-4
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 73
allele frequency: 1.103719383126701e-2
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

DP
type: SiteQuality
SIO_000300: 2.121054e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
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MQ
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BaseQRankSum
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
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GenotypeQuality
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Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
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South Asian
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African
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East Asian
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ReadPosRankSum
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FS
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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Latino
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Other
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South Asian
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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DP
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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MQRankSum
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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FS
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QD
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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Latino
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South Asian
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BaseQRankSum
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DP
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QD
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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South Asian
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Latino
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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DP
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SIO_000300: 2.108939e6

BaseQRankSum
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SIO_000300: 2.6e0

ClippingRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

FS
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SIO_000300: 3.929e0

QD
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SIO_000300: 1.281e1

MQRankSum
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SIO_000300: 2.24e-1

MQ
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SIO_000300: 5.966e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

FS
type: SiteQuality
SIO_000300: 5.378e0

VQSLOD
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SIO_000300: 7.21e-1

QD
type: SiteQuality
SIO_000300: 9.93e0

DP
type: SiteQuality
SIO_000300: 2.108978e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.7e-1

DP
type: SiteQuality
SIO_000300: 2.108786e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.104e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.225e1

GenotypeQuality
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variant carriers: 831

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.491759065028469e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 227
allele frequency: 2.181433788199116e-2
allele num: 10406
num of homozygotes: 3

East Asian
type: Population
allele count: 593
allele frequency: 6.855491329479768e-2
allele num: 8650
num of homozygotes: 31

South Asian
type: Population
allele count: 25
allele frequency: 1.514050387596899e-3
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.20918984280532e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.189763e6

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

VQSLOD
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SIO_000300: 5.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.395e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.45e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.765904285988853e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

QD
type: SiteQuality
SIO_000300: 1.439e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

DP
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SIO_000300: 2.09973e6

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.227e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
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DP
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SIO_000300: 2.098853e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

QD
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SIO_000300: 1.334e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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South Asian
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allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.878e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.098709e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.331e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
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allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
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Other
type: Population
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East Asian
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Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.021e0

FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

MQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
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Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.583e0

InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
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FS
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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South Asian
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Latino
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African
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South Asian
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Other
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European (Finnish)
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Other
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South Asian
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Other
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African
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East Asian
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South Asian
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Latino
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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South Asian
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East Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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ClippingRankSum
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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MQ
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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African
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Latino
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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FS
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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MQRankSum
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MQ
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BaseQRankSum
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FS
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VQSLOD
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QD
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InbreedingCoeff
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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Latino
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African
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South Asian
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QD
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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East Asian
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Other
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African
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ReadPosRankSum
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DP
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MQRankSum
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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East Asian
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Other
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European (Non-Finnish)
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QD
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MQRankSum
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InbreedingCoeff
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FS
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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Other
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VQSLOD
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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MQRankSum
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DP
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BaseQRankSum
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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FS
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DP
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -5.99e-1

VQSLOD
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FS
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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BaseQRankSum
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SIO_000300: -7.84e-1

MQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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SIO_000300: -3.417e0

DP
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ClippingRankSum
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SIO_000300: -1.762e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.36e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 2.09128e6

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.123e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 2.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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QD
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SIO_000300: 1.481e1

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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FS
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DP
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BaseQRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

VQSLOD
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MQ
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 900
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African
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.504800312998465e-5
allele num: 66454
num of homozygotes: 0

DP
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.009962977455377e-5
allele num: 66446
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 900
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African
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allele frequency: 0.0e0
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East Asian
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South Asian
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

QD
type: SiteQuality
SIO_000300: 1.967e1

FS
type: SiteQuality
SIO_000300: 3.853e0

VQSLOD
type: SiteQuality
SIO_000300: -1.94e-1

DP
type: SiteQuality
SIO_000300: 2.064238e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33567
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010959894014212e-5
allele num: 66424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 2.063558e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

MQRankSum
type: SiteQuality
SIO_000300: -5.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

QD
type: SiteQuality
SIO_000300: 1.902e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 2.948e0

VQSLOD
type: SiteQuality
SIO_000300: -2.959e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.324e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 801
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.698e0

QD
type: SiteQuality
SIO_000300: 7.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.268e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.0591e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 1427
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variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.906413485758574e-4
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

DP
type: SiteQuality
SIO_000300: 2.053559e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.1857e1

VQSLOD
type: SiteQuality
SIO_000300: -2.383e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.581e0

QD
type: SiteQuality
SIO_000300: 1.12e1

GenotypeQuality
all individuals: 1466
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1395
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GenotypeQuality
all individuals: 456
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508159140952553e-5
allele num: 66306
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

FS
type: SiteQuality
SIO_000300: 2.112e0

MQ
type: SiteQuality
SIO_000300: 5.724e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

DP
type: SiteQuality
SIO_000300: 2.0445e6

VQSLOD
type: SiteQuality
SIO_000300: -1.242e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

QD
type: SiteQuality
SIO_000300: 1.889e1

GenotypeQuality
all individuals: 294
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variant carriers: 0

GenotypeQuality
all individuals: 8601
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variant carriers: 4

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 55
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GenotypeQuality
all individuals: 425
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GenotypeQuality
all individuals: 2098
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GenotypeQuality
all individuals: 1962
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7380
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variant carriers: 0

GenotypeQuality
all individuals: 536
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.798169980644026e-5
allele num: 11366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.34246896228625e-4
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518695137138171e-5
allele num: 65846
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

QD
type: SiteQuality
SIO_000300: 1.256e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

FS
type: SiteQuality
SIO_000300: 5.531e0

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

DP
type: SiteQuality
SIO_000300: 1.943912e6

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 1923
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 749
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GenotypeQuality
all individuals: 1283
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.805844283192783e-5
allele num: 10198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 3.799854085603113e-4
allele num: 65792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.517411185367569e-4
allele num: 11372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 1.941453e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.432e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 382
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.395e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.496e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.021e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.905827e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6856
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521977352976988e-5
allele num: 65704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.894232e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

GenotypeQuality
all individuals: 497
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5885
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GenotypeQuality
all individuals: 2283
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4386
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GenotypeQuality
all individuals: 8572
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GenotypeQuality
all individuals: 1714
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64926
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.332e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 1.731458e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.221e0

VQSLOD
type: SiteQuality
SIO_000300: -3.294e0

QD
type: SiteQuality
SIO_000300: 5.69e0

GenotypeQuality
all individuals: 227
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2725
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8570
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 827
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5778
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13980
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.159152500615915e-5
allele num: 16236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.424e1

FS
type: SiteQuality
SIO_000300: 6.133e0

MQRankSum
type: SiteQuality
SIO_000300: -1.048e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

DP
type: SiteQuality
SIO_000300: 1.722533e6

VQSLOD
type: SiteQuality
SIO_000300: -5.371e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e0

GenotypeQuality
all individuals: 743
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3891
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12745
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087682672233821e-5
allele num: 47900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.986e0

DP
type: SiteQuality
SIO_000300: 1.132618e6

FS
type: SiteQuality
SIO_000300: 6.107e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 8.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

GenotypeQuality
all individuals: 16692
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4091
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.033512282414186e-5
allele num: 49176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.65e-1

FS
type: SiteQuality
SIO_000300: 1.711e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

DP
type: SiteQuality
SIO_000300: 1.187355e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.221e0

GenotypeQuality
all individuals: 2663
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4481
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16692
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4091
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5864
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.266784899923993e-4
allele num: 7894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49176
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.187355e6

MQ
type: SiteQuality
SIO_000300: 5.728e1

VQSLOD
type: SiteQuality
SIO_000300: -1.221e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

FS
type: SiteQuality
SIO_000300: 1.711e0

QD
type: SiteQuality
SIO_000300: 1.177e1