14-102359467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102359467
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102359467
    reference: chr 14
allele count: 1
allele frequency: 8.298892927683448e-6
allele num: 120498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*157+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.798+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.798+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.891+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*289+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.963+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.195+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.798+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.885+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.460+22G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.798+22G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

14-102359479-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102359479
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102359479
    reference: chr 14
allele count: 1
allele frequency: 8.319329129299013e-6
allele num: 120202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*157+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.798+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.460+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*289+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.891+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.195+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.885+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.798+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.963+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.798+34T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.798+34T>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-102359485-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102359485
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102359485
    reference: chr 14
allele count: 2
allele frequency: 1.666583337499792e-5
allele num: 120006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.195+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*157+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.798+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*289+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.963+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.885+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.798+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.798+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.891+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.798+40T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.460+40T>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8549
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-102359489-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102359489
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102359489
    reference: chr 14
allele count: 24984
allele frequency: 2.097204734323848e-1
allele num: 119130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*289+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.798+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*157+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.195+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.798+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.460+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.798+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.885+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.963+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.891+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.798+44A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 4.25e1
  variant carriers: 1267
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 2206
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.75e1
  variant carriers: 695
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 16505
  bin: 2.25e1
  variant carriers: 4143
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.25e1
  variant carriers: 207
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 1.25e1
  variant carriers: 966
genotype depth: GenotypeDepth
  all individuals: 12676
  bin: 2.75e1
  variant carriers: 4327
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 421
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 300
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 7360
  bin: 3.25e1
  variant carriers: 3535
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 1.75e1
  variant carriers: 2686
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.75e1
  variant carriers: 383
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.5e0
  variant carriers: 20
num of homozygotes: 3307
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

14-102359492-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102359492
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102359492
    reference: chr 14
allele count: 2
allele frequency: 1.677599020282172e-5
allele num: 119218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.195+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.460+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.798+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.798+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.891+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*289+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.798+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.885+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.963+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.798+47A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*157+47A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4782
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

14-102359496-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102359496
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102359496
    reference: chr 14
allele count: 2
allele frequency: 1.681322191771609e-5
allele num: 118954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.798+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*157+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.195+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.798+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.460+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.891+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.963+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*289+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.798+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.885+51T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.798+51T>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12643
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17290
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

14-102360798-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360798
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360798
    reference: chr 14
allele count: 1
allele frequency: 8.306613725848521e-6
allele num: 120386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-46A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-46A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13444
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-102360811-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360811
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360811
    reference: chr 14
allele count: 11
allele frequency: 9.11954899684961e-5
allele num: 120620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-33A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-33A>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8961
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19528
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

14-102360819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360819
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360819
    reference: chr 14
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-25T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-25T>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

14-102360821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360821
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360821
    reference: chr 14
allele count: 2
allele frequency: 1.653986106516705e-5
allele num: 120920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-23C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-23C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/14-102360823-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360823
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360823
    reference: chr 14
allele count: 1
allele frequency: 8.265145879824779e-6
allele num: 120990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-21C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-21C>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

14-102360823-CTTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360823
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360820
    reference: chr 14
allele count: 1
allele frequency: 8.265145879824779e-6
allele num: 120990
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-20_892-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-20_*290-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-20_964-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-20_799-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-20_799-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-20_*158-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-20_799-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-20_196-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-20_886-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-20_461-18delTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-20_799-18delTTT
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: CTTT
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

14-102360826-T-TGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360826
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360828
    reference: chr 14
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: TGA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-18_892-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-18_196-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-18_799-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-18_886-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-18_964-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-18_461-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-18_799-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-18_*290-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-18_799-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-18_799-17insGA
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-18_*158-17insGA
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ

14-102360835-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360835
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360835
    reference: chr 14
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964-9A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799-9A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

14-102360844-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360844
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360844
    reference: chr 14
allele count: 2
allele frequency: 1.648451280022419e-5
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.799C>T
  hgvsp: ENST00000334743.5:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*290C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*158C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.196C>T
  hgvsp: ENST00000557716.2:c.196C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.799C>T
  hgvsp: ENST00000350249.3:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.886C>T
  hgvsp: ENST00000557268.1:c.886C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.892C>T
  hgvsp: ENST00000422945.2:c.892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.799C>T
  hgvsp: ENST00000557095.1:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.461C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.964C>T
  hgvsp: ENST00000328724.5:c.964C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.799C>T
  hgvsp: ENST00000445439.3:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.892C>T
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

14-102360849-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360849
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360849
    reference: chr 14
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.969A>G
  hgvsp: ENST00000328724.5:c.969A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450743
  ensembl transcript: ENST00000554137
  gene symbol: PPP2R5C
  hgvsc: ENST00000554137.1:c.*163A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.466A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.804A>G
  hgvsp: ENST00000350249.3:c.804A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.804A>G
  hgvsp: ENST00000445439.3:c.804A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.897A>G
  hgvsp: ENST00000422945.2:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.891A>G
  hgvsp: ENST00000557268.1:c.891A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*295A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.804A>G
  hgvsp: ENST00000557095.1:c.804A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.804A>G
  hgvsp: ENST00000334743.5:c.804A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.201A>G
  hgvsp: ENST00000557716.2:c.201A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala299Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

14-102360856-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360856
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360856
    reference: chr 14
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.811G>A
  hgvsp: ENSP00000408389.3:p.Val271Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.904G>A
  hgvsp: ENSP00000412324.2:p.Val302Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.811G>A
  hgvsp: ENSP00000333905.4:p.Val271Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*302G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.473G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.898G>A
  hgvsp: ENSP00000450931.1:p.Val300Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.811G>A
  hgvsp: ENSP00000451179.1:p.Val271Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.811G>A
  hgvsp: ENSP00000262239.5:p.Val271Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.208G>A
  hgvsp: ENSP00000452124.2:p.Val70Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.976G>A
  hgvsp: ENSP00000329009.5:p.Val326Ile
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val302Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

14-102360897-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360897
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360897
    reference: chr 14
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852A>G
  hgvsp: ENST00000334743.5:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017A>G
  hgvsp: ENST00000328724.5:c.1017A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249A>G
  hgvsp: ENST00000557716.2:c.249A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945A>G
  hgvsp: ENST00000422945.2:c.945A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939A>G
  hgvsp: ENST00000557268.1:c.939A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852A>G
  hgvsp: ENST00000445439.3:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852A>G
  hgvsp: ENST00000350249.3:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852A>G
  hgvsp: ENST00000557095.1:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.945A>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-102360904-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360904
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360904
    reference: chr 14
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+7A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+7A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: c.945+7A>G
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum

14-102360914-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360914
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360914
    reference: chr 14
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+17G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

14-102360915-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360915
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360915
    reference: chr 14
allele count: 2
allele frequency: 1.649321304283287e-5
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+18C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+18C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7369
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

14-102360916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360916
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360916
    reference: chr 14
allele count: 16683
allele frequency: 1.376530578566949e-1
allele num: 121196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+19G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+19G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 9.75e1
  variant carriers: 1979
genotype depth: GenotypeDepth
  all individuals: 15273
  bin: 2.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12675
  bin: 2.75e1
  variant carriers: 403
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 4.75e1
  variant carriers: 1461
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.75e1
  variant carriers: 1390
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 8.25e1
  variant carriers: 515
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.75e1
  variant carriers: 640
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 3.75e1
  variant carriers: 1054
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 844
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 318
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 8.75e1
  variant carriers: 388
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 3.25e1
  variant carriers: 775
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 6.75e1
  variant carriers: 1028
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 5.25e1
  variant carriers: 1542
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.25e1
  variant carriers: 1267
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 4.25e1
  variant carriers: 1388
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5671
  bin: 6.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.75e1
  variant carriers: 6
num of homozygotes: 1451
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

14-102360917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360917
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360917
    reference: chr 14
allele count: 4
allele frequency: 3.299948850792813e-5
allele num: 121214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+20C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+20C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

14-102360918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360918
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360918
    reference: chr 14
allele count: 4
allele frequency: 3.3003300330033e-5
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+21G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+21G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10324
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-102360922-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360922
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360922
    reference: chr 14
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+25T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+25T>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7488
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

14-102360930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360930
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360930
    reference: chr 14
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+33G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+33G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/14-102360946-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102360946
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102360946
    reference: chr 14
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.939+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*343+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.249+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1017+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.852+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.945+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.514+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.852+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.852+49A>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.852+49A>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

14-102368007-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368007
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368007
    reference: chr 14
allele count: 6
allele frequency: 4.948208748433067e-5
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-49G>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-49G>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14951
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13269
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/14-102368014-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368014
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368014
    reference: chr 14
allele count: 7
allele frequency: 5.772719775688603e-5
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-42C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-42C>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13381
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15106
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14867
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

14-102368015-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368015
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368015
    reference: chr 14
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-41C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-41C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4793
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-102368017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368017
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368017
    reference: chr 14
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-39C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-39C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4808
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4023
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

14-102368018-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368018
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368018
    reference: chr 14
allele count: 7
allele frequency: 5.77062586559388e-5
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-38G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4814
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

14-102368020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368020
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368020
    reference: chr 14
allele count: 2
allele frequency: 1.64883180266781e-5
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-36G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-36G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5205
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

14-102368021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368021
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368021
    reference: chr 14
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-35G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-35G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6712
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6678
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2632
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

14-102368024-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368024
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368024
    reference: chr 14
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-32A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-32A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

14-102368037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368037
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368037
    reference: chr 14
allele count: 4
allele frequency: 3.295707341188102e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-19C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-19C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

14-102368038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368038
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368038
    reference: chr 14
allele count: 7
allele frequency: 5.767202741892961e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-18G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-18G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15526
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

14-102368043-A-ATTTCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368043
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368048
    reference: chr 14
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: ATTTCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-9_250-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-9_946-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-9_853-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-9_853-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-9_853-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-9_*344-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-9_853-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-9_515-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-9_1018-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-9_940-5dupCTTTT
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

14-102368043-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368043
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368043
    reference: chr 14
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-13A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-13A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/14-102368047-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368047
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368047
    reference: chr 14
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-9C>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-9C>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

14-102368048-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368048
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368048
    reference: chr 14
allele count: 3
allele frequency: 2.471413978317461e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-8T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-8T>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: c.946-8T>G
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

14-102368052-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368052
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368052
    reference: chr 14
allele count: 80
allele frequency: 6.590111537637775e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.853-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.853-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.946-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.250-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1018-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.853-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.940-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.515-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.853-4G>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*344-4G>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15373
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5651
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: c.946-4G>C
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

14-102368064-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368064
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368064
    reference: chr 14
allele count: 4
allele frequency: 3.294838635277837e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*352G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.861G>A
  hgvsp: ENSP00000333905.4:p.Met287Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.954G>A
  hgvsp: ENSP00000412324.2:p.Met318Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.523G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1026G>A
  hgvsp: ENSP00000329009.5:p.Met342Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.861G>A
  hgvsp: ENSP00000262239.5:p.Met287Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.861G>A
  hgvsp: ENSP00000408389.3:p.Met287Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.948G>A
  hgvsp: ENSP00000450931.1:p.Met316Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.258G>A
  hgvsp: ENSP00000452124.2:p.Met86Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.861G>A
  hgvsp: ENSP00000451179.1:p.Met287Ile
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18083
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Met318Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

14-102368065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368065
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368065
    reference: chr 14
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.862G>A
  hgvsp: ENSP00000262239.5:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.949G>A
  hgvsp: ENSP00000450931.1:p.Ala317Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.955G>A
  hgvsp: ENSP00000412324.2:p.Ala319Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.862G>A
  hgvsp: ENSP00000451179.1:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.862G>A
  hgvsp: ENSP00000408389.3:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.862G>A
  hgvsp: ENSP00000333905.4:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*353G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1027G>A
  hgvsp: ENSP00000329009.5:p.Ala343Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.259G>A
  hgvsp: ENSP00000452124.2:p.Ala87Thr
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.524G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala319Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-102368075-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368075
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368075
    reference: chr 14
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.872A>G
  hgvsp: ENSP00000262239.5:p.Lys291Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.872A>G
  hgvsp: ENSP00000451179.1:p.Lys291Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.872A>G
  hgvsp: ENSP00000408389.3:p.Lys291Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.534A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.872A>G
  hgvsp: ENSP00000333905.4:p.Lys291Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.959A>G
  hgvsp: ENSP00000450931.1:p.Lys320Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1037A>G
  hgvsp: ENSP00000329009.5:p.Lys346Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.269A>G
  hgvsp: ENSP00000452124.2:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452533
  ensembl transcript: ENST00000557534
  gene symbol: PPP2R5C
  hgvsc: ENST00000557534.1:c.*363A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.965A>G
  hgvsp: ENSP00000412324.2:p.Lys322Arg
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys322Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-102368094-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368094
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368094
    reference: chr 14
allele count: 6
allele frequency: 4.942013705851344e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.553C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.891C>T
  hgvsp: ENST00000445439.3:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.891C>T
  hgvsp: ENST00000334743.5:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1056C>T
  hgvsp: ENST00000328724.5:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.891C>T
  hgvsp: ENST00000557095.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.288C>T
  hgvsp: ENST00000557716.2:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.891C>T
  hgvsp: ENST00000350249.3:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.984C>T
  hgvsp: ENST00000422945.2:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.978C>T
  hgvsp: ENST00000557268.1:c.978C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His328His
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD

14-102368100-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368100
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368100
    reference: chr 14
allele count: 16
allele frequency: 1.317870321560359e-4
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.984A>G
  hgvsp: ENST00000557268.1:c.984A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.294A>G
  hgvsp: ENST00000557716.2:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.897A>G
  hgvsp: ENST00000445439.3:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.897A>G
  hgvsp: ENST00000350249.3:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.990A>G
  hgvsp: ENST00000422945.2:c.990A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.897A>G
  hgvsp: ENST00000557095.1:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.559A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1062A>G
  hgvsp: ENST00000328724.5:c.1062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.897A>G
  hgvsp: ENST00000334743.5:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro330Pro
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS

14-102368121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368121
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368121
    reference: chr 14
allele count: 7
allele frequency: 5.765587678115476e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.918C>T
  hgvsp: ENST00000334743.5:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1083C>T
  hgvsp: ENST00000328724.5:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1005C>T
  hgvsp: ENST00000557268.1:c.1005C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.918C>T
  hgvsp: ENST00000557095.1:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.580C>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.315C>T
  hgvsp: ENST00000557716.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1011C>T
  hgvsp: ENST00000422945.2:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.918C>T
  hgvsp: ENST00000350249.3:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.918C>T
  hgvsp: ENST00000445439.3:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4853
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn337Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-102368127-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368127
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368127
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.321A>G
  hgvsp: ENST00000557716.2:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.586A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.924A>G
  hgvsp: ENST00000350249.3:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.924A>G
  hgvsp: ENST00000334743.5:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1089A>G
  hgvsp: ENST00000328724.5:c.1089A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.924A>G
  hgvsp: ENST00000557095.1:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1011A>G
  hgvsp: ENST00000557268.1:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.924A>G
  hgvsp: ENST00000445439.3:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1017A>G
  hgvsp: ENST00000422945.2:c.1017A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4853
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6717
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu339Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

14-102368130-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368130
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368130
    reference: chr 14
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1020A>G
  hgvsp: ENST00000422945.2:c.1020A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.589A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.927A>G
  hgvsp: ENST00000334743.5:c.927A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.927A>G
  hgvsp: ENST00000557095.1:c.927A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1014A>G
  hgvsp: ENST00000557268.1:c.1014A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.927A>G
  hgvsp: ENST00000445439.3:c.927A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.324A>G
  hgvsp: ENST00000557716.2:c.324A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.927A>G
  hgvsp: ENST00000350249.3:c.927A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1092A>G
  hgvsp: ENST00000328724.5:c.1092A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu340Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

14-102368133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368133
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368133
    reference: chr 14
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.930G>A
  hgvsp: ENST00000445439.3:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1023G>A
  hgvsp: ENST00000422945.2:c.1023G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.327G>A
  hgvsp: ENST00000557716.2:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.930G>A
  hgvsp: ENST00000334743.5:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.930G>A
  hgvsp: ENST00000557095.1:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1017G>A
  hgvsp: ENST00000557268.1:c.1017G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1095G>A
  hgvsp: ENST00000328724.5:c.1095G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.592G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.930G>A
  hgvsp: ENST00000350249.3:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu341Glu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

14-102368139-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368139
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368139
    reference: chr 14
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.936A>G
  hgvsp: ENST00000445439.3:c.936A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1029A>G
  hgvsp: ENST00000422945.2:c.1029A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.598A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.333A>G
  hgvsp: ENST00000557716.2:c.333A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1023A>G
  hgvsp: ENST00000557268.1:c.1023A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1101A>G
  hgvsp: ENST00000328724.5:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.936A>G
  hgvsp: ENST00000557095.1:c.936A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.936A>G
  hgvsp: ENST00000350249.3:c.936A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.936A>G
  hgvsp: ENST00000334743.5:c.936A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu343Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

14-102368154-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368154
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368154
    reference: chr 14
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.951A>G
  hgvsp: ENST00000445439.3:c.951A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1116A>G
  hgvsp: ENST00000328724.5:c.1116A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.951A>G
  hgvsp: ENST00000350249.3:c.951A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1038A>G
  hgvsp: ENST00000557268.1:c.1038A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.348A>G
  hgvsp: ENST00000557716.2:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.951A>G
  hgvsp: ENST00000557095.1:c.951A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.613A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.951A>G
  hgvsp: ENST00000334743.5:c.951A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1044A>G
  hgvsp: ENST00000422945.2:c.1044A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro348Pro
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

14-102368154-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368154
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368154
    reference: chr 14
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.951A>T
  hgvsp: ENST00000334743.5:c.951A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.951A>T
  hgvsp: ENST00000557095.1:c.951A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1038A>T
  hgvsp: ENST00000557268.1:c.1038A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.613A>T
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1044A>T
  hgvsp: ENST00000422945.2:c.1044A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1116A>T
  hgvsp: ENST00000328724.5:c.1116A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.951A>T
  hgvsp: ENST00000445439.3:c.951A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.951A>T
  hgvsp: ENST00000350249.3:c.951A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.348A>T
  hgvsp: ENST00000557716.2:c.348A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15587
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro348Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

14-102368164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368164
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368164
    reference: chr 14
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.961G>A
  hgvsp: ENSP00000408389.3:p.Val321Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.358G>A
  hgvsp: ENSP00000452124.2:p.Val120Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.623G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1048G>A
  hgvsp: ENSP00000450931.1:p.Val350Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.961G>A
  hgvsp: ENSP00000262239.5:p.Val321Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.961G>A
  hgvsp: ENSP00000451179.1:p.Val321Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1054G>A
  hgvsp: ENSP00000412324.2:p.Val352Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.961G>A
  hgvsp: ENSP00000333905.4:p.Val321Met
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1126G>A
  hgvsp: ENSP00000329009.5:p.Val376Met
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val352Met
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

14-102368170-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368170
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368170
    reference: chr 14
allele count: 4
allele frequency: 3.295544423938835e-5
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.364A>G
  hgvsp: ENSP00000452124.2:p.Ile122Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.967A>G
  hgvsp: ENSP00000262239.5:p.Ile323Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.629A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.967A>G
  hgvsp: ENSP00000451179.1:p.Ile323Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1060A>G
  hgvsp: ENSP00000412324.2:p.Ile354Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.967A>G
  hgvsp: ENSP00000333905.4:p.Ile323Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1132A>G
  hgvsp: ENSP00000329009.5:p.Ile378Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.967A>G
  hgvsp: ENSP00000408389.3:p.Ile323Val
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1054A>G
  hgvsp: ENSP00000450931.1:p.Ile352Val
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18060
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile354Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

14-102368176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368176
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368176
    reference: chr 14
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.973G>A
  hgvsp: ENSP00000262239.5:p.Glu325Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1060G>A
  hgvsp: ENSP00000450931.1:p.Glu354Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1138G>A
  hgvsp: ENSP00000329009.5:p.Glu380Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.973G>A
  hgvsp: ENSP00000451179.1:p.Glu325Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.973G>A
  hgvsp: ENSP00000333905.4:p.Glu325Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.973G>A
  hgvsp: ENSP00000408389.3:p.Glu325Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.370G>A
  hgvsp: ENSP00000452124.2:p.Glu124Lys
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.635G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1066G>A
  hgvsp: ENSP00000412324.2:p.Glu356Lys
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4854
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18059
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu356Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

14-102368188-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368188
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368188
    reference: chr 14
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1150C>T
  hgvsp: ENSP00000329009.5:p.Arg384Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.382C>T
  hgvsp: ENSP00000452124.2:p.Arg128Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.985C>T
  hgvsp: ENSP00000408389.3:p.Arg329Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1078C>T
  hgvsp: ENSP00000412324.2:p.Arg360Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.985C>T
  hgvsp: ENSP00000262239.5:p.Arg329Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1072C>T
  hgvsp: ENSP00000450931.1:p.Arg358Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.985C>T
  hgvsp: ENSP00000451179.1:p.Arg329Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.985C>T
  hgvsp: ENSP00000333905.4:p.Arg329Trp
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.647C>T
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg360Trp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-102368192-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368192
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368192
    reference: chr 14
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1154A>G
  hgvsp: ENSP00000329009.5:p.Gln385Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.989A>G
  hgvsp: ENSP00000451179.1:p.Gln330Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1082A>G
  hgvsp: ENSP00000412324.2:p.Gln361Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.651A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.989A>G
  hgvsp: ENSP00000408389.3:p.Gln330Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1076A>G
  hgvsp: ENSP00000450931.1:p.Gln359Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.989A>G
  hgvsp: ENSP00000333905.4:p.Gln330Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.386A>G
  hgvsp: ENSP00000452124.2:p.Gln129Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.989A>G
  hgvsp: ENSP00000262239.5:p.Gln330Arg
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13541
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3523
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15377
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln361Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

14-102368193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368193
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368193
    reference: chr 14
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.990G>A
  hgvsp: ENST00000334743.5:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1083G>A
  hgvsp: ENST00000422945.2:c.1083G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.990G>A
  hgvsp: ENST00000350249.3:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.387G>A
  hgvsp: ENST00000557716.2:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1077G>A
  hgvsp: ENST00000557268.1:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.652G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.990G>A
  hgvsp: ENST00000557095.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.990G>A
  hgvsp: ENST00000445439.3:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1155G>A
  hgvsp: ENST00000328724.5:c.1155G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5226
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4848
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln361Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

14-102368201-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368201
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368201
    reference: chr 14
allele count: 2
allele frequency: 1.651064110819423e-5
allele num: 121134
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.8A>G
  hgvsp: ENSP00000453906.1:p.Lys3Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1091A>G
  hgvsp: ENSP00000412324.2:p.Lys364Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.395A>G
  hgvsp: ENSP00000452124.2:p.Lys132Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.998A>G
  hgvsp: ENSP00000333905.4:p.Lys333Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.998A>G
  hgvsp: ENSP00000451179.1:p.Lys333Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.998A>G
  hgvsp: ENSP00000408389.3:p.Lys333Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1085A>G
  hgvsp: ENSP00000450931.1:p.Lys362Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1163A>G
  hgvsp: ENSP00000329009.5:p.Lys388Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.998A>G
  hgvsp: ENSP00000262239.5:p.Lys333Arg
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.660A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys364Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

14-102368206-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368206
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368206
    reference: chr 14
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1003G>A
  hgvsp: ENSP00000408389.3:p.Val335Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1003G>A
  hgvsp: ENSP00000262239.5:p.Val335Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1003G>A
  hgvsp: ENSP00000451179.1:p.Val335Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.13G>A
  hgvsp: ENSP00000453906.1:p.Val5Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1090G>A
  hgvsp: ENSP00000450931.1:p.Val364Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1168G>A
  hgvsp: ENSP00000329009.5:p.Val390Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1003G>A
  hgvsp: ENSP00000333905.4:p.Val335Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.400G>A
  hgvsp: ENSP00000452124.2:p.Val134Ile
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.665G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1096G>A
  hgvsp: ENSP00000412324.2:p.Val366Ile
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val366Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-102368243-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368243
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368243
    reference: chr 14
allele count: 1
allele frequency: 8.331666999933347e-6
allele num: 120024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1110+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1023+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1023+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1023+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1023+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1188+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.685+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1116+17G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.33+17G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18031
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-102368249-GATTAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368249
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368244
    reference: chr 14
allele count: 1
allele frequency: 8.341953351796856e-6
allele num: 119876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1023+27_1023+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1023+27_1023+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1023+27_1023+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.33+27_33+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1116+27_1116+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1188+27_1188+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.685+27_685+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+27_420+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1110+27_1110+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1023+27_1023+31delAAATT
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4004
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: GATTAA
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

14-102368260-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368260
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368260
    reference: chr 14
allele count: 1
allele frequency: 8.356173541012099e-6
allele num: 119672
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1023+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1023+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.33+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.685+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1023+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1023+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1116+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1110+34T>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1188+34T>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-102368260-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368260
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368259
    reference: chr 14
allele count: 5
allele frequency: 4.17808677050605e-5
allele num: 119672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.685+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1023+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1110+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1023+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.33+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1116+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1023+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1188+36delC
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1023+36delC
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4000
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18025
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: TC
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

14-102368264-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368264
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368264
    reference: chr 14
allele count: 1
allele frequency: 8.369321415419637e-6
allele num: 119484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1023+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1188+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.685+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1110+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1023+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1023+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.33+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1023+38G>A
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1116+38G>A
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

14-102368270-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102368270
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102368270
    reference: chr 14
allele count: 5
allele frequency: 4.188937852918014e-5
allele num: 119362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1023+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.685+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1110+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1023+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1116+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1023+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1023+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.33+44A>G
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1188+44A>G
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10903
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9402
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6616
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

14-102372693-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102372693
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 102372693
    reference: chr 14
allele count: 1
allele frequency: 8.759328685049578e-6
allele num: 114164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000451179
  ensembl transcript: ENST00000557095
  gene symbol: PPP2R5C
  hgvsc: ENST00000557095.1:c.1024-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000333905
  ensembl transcript: ENST00000334743
  gene symbol: PPP2R5C
  hgvsc: ENST00000334743.5:c.1024-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000450931
  ensembl transcript: ENST00000557268
  gene symbol: PPP2R5C
  hgvsc: ENST00000557268.1:c.1111-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000262239
  ensembl transcript: ENST00000350249
  gene symbol: PPP2R5C
  hgvsc: ENST00000350249.3:c.1024-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000452124
  ensembl transcript: ENST00000557716
  gene symbol: PPP2R5C
  hgvsc: ENST00000557716.2:c.420+4467T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000453906
  ensembl transcript: ENST00000561006
  gene symbol: PPP2R5C
  hgvsc: ENST00000561006.1:c.34-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000408389
  ensembl transcript: ENST00000445439
  gene symbol: PPP2R5C
  hgvsc: ENST00000445439.3:c.1024-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000329009
  ensembl transcript: ENST00000328724
  gene symbol: PPP2R5C
  hgvsc: ENST00000328724.5:c.1189-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl protein: ENSP00000412324
  ensembl transcript: ENST00000422945
  gene symbol: PPP2R5C
  hgvsc: ENST00000422945.2:c.1117-46T>C
  variant of: http://identifiers.org/hgnc/9311
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078304
  ensembl transcript: ENST00000556218
  gene symbol: PPP2R5C
  hgvsc: ENST00000556218.1:n.686-3233T>C
  variant of: http://identifiers.org/hgnc/9311
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 271
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29853
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7823
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5880
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1264
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510893542441e-5
allele num: 66186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.109e0

QD
type: SiteQuality
SIO_000300: 2.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.328e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 1.732807e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

GenotypeQuality
all individuals: 2861
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3198
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23951
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2907
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5875
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2319
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66038
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.674e1

DP
type: SiteQuality
SIO_000300: 1.689625e6

MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 19435
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5878
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3738
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.947798987144527e-4
allele num: 10268
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.904e1

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.211e0

DP
type: SiteQuality
SIO_000300: 1.671732e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 841
bin: 9.25e1
variant carriers: 239

GenotypeQuality
all individuals: 22493
bin: 9.75e1
variant carriers: 19417

GenotypeQuality
all individuals: 12054
bin: 6.25e1
variant carriers: 250

GenotypeQuality
all individuals: 2455
bin: 3.25e1
variant carriers: 57

GenotypeQuality
all individuals: 1962
bin: 7.75e1
variant carriers: 262

GenotypeQuality
all individuals: 1632
bin: 7.25e1
variant carriers: 185

GenotypeQuality
all individuals: 2630
bin: 4.75e1
variant carriers: 168

GenotypeQuality
all individuals: 144
bin: 1.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1704
bin: 4.25e1
variant carriers: 78

GenotypeQuality
all individuals: 221
bin: 1.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1375
bin: 8.25e1
variant carriers: 275

GenotypeQuality
all individuals: 3109
bin: 3.75e1
variant carriers: 117

GenotypeQuality
all individuals: 599
bin: 8.75e1
variant carriers: 125

GenotypeQuality
all individuals: 4075
bin: 6.75e1
variant carriers: 249

GenotypeQuality
all individuals: 201
bin: 2.5e0
variant carriers: 19

GenotypeQuality
all individuals: 1428
bin: 5.25e1
variant carriers: 192

GenotypeQuality
all individuals: 1322
bin: 2.75e1
variant carriers: 43

GenotypeQuality
all individuals: 476
bin: 5.75e1
variant carriers: 111

GenotypeQuality
all individuals: 1821
bin: 2.25e1
variant carriers: 40

African
type: Population
allele count: 5716
allele frequency: 5.594049716187121e-1
allele num: 10218
num of homozygotes: 1581

Latino
type: Population
allele count: 1956
allele frequency: 1.724867724867725e-1
allele num: 11340
num of homozygotes: 167

East Asian
type: Population
allele count: 2305
allele frequency: 2.720084965777673e-1
allele num: 8474
num of homozygotes: 300

Other
type: Population
allele count: 175
allele frequency: 1.961883408071749e-1
allele num: 892
num of homozygotes: 23

South Asian
type: Population
allele count: 2717
allele frequency: 1.677781894528838e-1
allele num: 16194
num of homozygotes: 245

European (Non-Finnish)
type: Population
allele count: 11078
allele frequency: 1.692486326274941e-1
allele num: 65454
num of homozygotes: 916

European (Finnish)
type: Population
allele count: 1037
allele frequency: 1.581274778896005e-1
allele num: 6558
num of homozygotes: 75

DP
type: SiteQuality
SIO_000300: 1.694539e6

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.480000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.83e0

QD
type: SiteQuality
SIO_000300: 1.962e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 2749
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.247191011235955e-3
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

MQRankSum
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SIO_000300: -8.129999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 2.082e0

DP
type: SiteQuality
SIO_000300: 1.633346e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.247e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3040
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.965795164143896e-4
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

MQRankSum
type: SiteQuality
SIO_000300: 7.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.075e0

DP
type: SiteQuality
SIO_000300: 1.630615e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.63e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511532996765319e-5
allele num: 66158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.002e1

DP
type: SiteQuality
SIO_000300: 2.031472e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -1.2e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

MQRankSum
type: SiteQuality
SIO_000300: -1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.451e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 3.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.929e0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.206563706563707e-4
allele num: 66304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.605976372480889e-4
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.075731e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.185e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

DP
type: SiteQuality
SIO_000300: 2.091652e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.930874686232864e-4
allele num: 10358
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.61e-1

InbreedingCoeff
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SIO_000300: 1.1e-3

BaseQRankSum
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MQ
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DP
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SIO_000300: 2.094984e6

MQRankSum
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ClippingRankSum
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VQSLOD
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SIO_000300: 9.360000000000001e-1

FS
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SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.141e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.866e1

ReadPosRankSum
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QD
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InbreedingCoeff
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SIO_000300: 1.0e-4

MQRankSum
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DP
type: SiteQuality
SIO_000300: 2.097301e6

VQSLOD
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SIO_000300: 1.98e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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Other
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FS
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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SIO_000300: -2.014e0

InbreedingCoeff
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SIO_000300: 1.0e-4

VQSLOD
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DP
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ReadPosRankSum
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SIO_000300: -4.15e-1

QD
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SIO_000300: 9.94e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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Latino
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QD
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BaseQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 904
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

East Asian
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allele num: 8650
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South Asian
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MQRankSum
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BaseQRankSum
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DP
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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SIO_000300: -8.6e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16488
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East Asian
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allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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SIO_000300: 6.606e0

DP
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BaseQRankSum
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SIO_000300: -1.181e0

VQSLOD
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SIO_000300: 4.6e-1

QD
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SIO_000300: 1.06e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66710
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East Asian
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Other
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BaseQRankSum
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FS
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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Other
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MQ
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MQRankSum
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FS
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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Latino
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

QD
type: SiteQuality
SIO_000300: 1.395e1

DP
type: SiteQuality
SIO_000300: 2.10937e6

FS
type: SiteQuality
SIO_000300: 3.804e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.002e0

GenotypeQuality
all individuals: 7379
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
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GenotypeQuality
all individuals: 12617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.75e1
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GenotypeQuality
all individuals: 2336
bin: 9.25e1
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GenotypeQuality
all individuals: 3633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.684e0

DP
type: SiteQuality
SIO_000300: 2.106327e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.907e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -1.338e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
all individuals: 183
bin: 5.25e1
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GenotypeQuality
all individuals: 139
bin: 3.75e1
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GenotypeQuality
all individuals: 2334
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12619
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1690
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GenotypeQuality
all individuals: 228
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GenotypeQuality
all individuals: 4590
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
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variant carriers: 0

GenotypeQuality
all individuals: 24185
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
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GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 2.106254e6

QD
type: SiteQuality
SIO_000300: 1.417e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

GenotypeQuality
all individuals: 23205
bin: 9.75e1
variant carriers: 15067

GenotypeQuality
all individuals: 251
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variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
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variant carriers: 14

GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 2262
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variant carriers: 10

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2509
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variant carriers: 17

GenotypeQuality
all individuals: 54
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variant carriers: 3

GenotypeQuality
all individuals: 1140
bin: 8.75e1
variant carriers: 19

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 19980
bin: 6.25e1
variant carriers: 9

GenotypeQuality
all individuals: 3268
bin: 7.75e1
variant carriers: 28

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1547
bin: 9.25e1
variant carriers: 30

Other
type: Population
allele count: 112
allele frequency: 1.236203090507726e-1
allele num: 906
num of homozygotes: 9

South Asian
type: Population
allele count: 2324
allele frequency: 1.40950994662785e-1
allele num: 16488
num of homozygotes: 174

European (Finnish)
type: Population
allele count: 867
allele frequency: 1.311252268602541e-1
allele num: 6612
num of homozygotes: 50

East Asian
type: Population
allele count: 902
allele frequency: 1.043981481481481e-1
allele num: 8640
num of homozygotes: 45

African
type: Population
allele count: 3607
allele frequency: 3.471607314725698e-1
allele num: 10390
num of homozygotes: 651

European (Non-Finnish)
type: Population
allele count: 7489
allele frequency: 1.124204395340459e-1
allele num: 66616
num of homozygotes: 438

Latino
type: Population
allele count: 1382
allele frequency: 1.197158697158697e-1
allele num: 11544
num of homozygotes: 84

QD
type: SiteQuality
SIO_000300: 1.562e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.69e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.504071e6

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
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variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 3505
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variant carriers: 0

GenotypeQuality
all individuals: 2246
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variant carriers: 0

GenotypeQuality
all individuals: 4404
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GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 203
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GenotypeQuality
all individuals: 24714
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12274
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variant carriers: 4

GenotypeQuality
all individuals: 7601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000840235265874e-5
allele num: 66648
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

FS
type: SiteQuality
SIO_000300: 1.724e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.10257e6

QD
type: SiteQuality
SIO_000300: 1.451e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
all individuals: 328
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 230
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GenotypeQuality
all individuals: 3015
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 2246
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GenotypeQuality
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GenotypeQuality
all individuals: 12273
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variant carriers: 4

GenotypeQuality
all individuals: 24614
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GenotypeQuality
all individuals: 189
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GenotypeQuality
all individuals: 1599
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variant carriers: 0

GenotypeQuality
all individuals: 7592
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213886865744113e-4
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001110410852015e-5
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.929e1

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.73e-1

FS
type: SiteQuality
SIO_000300: 2.272e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.896e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.085e1

DP
type: SiteQuality
SIO_000300: 2.101618e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 196
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1598
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 273
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GenotypeQuality
all individuals: 569
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variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 4390
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variant carriers: 0

GenotypeQuality
all individuals: 3497
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variant carriers: 0

GenotypeQuality
all individuals: 130
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GenotypeQuality
all individuals: 3008
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GenotypeQuality
all individuals: 12268
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variant carriers: 1

GenotypeQuality
all individuals: 23616
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.568e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 8.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

DP
type: SiteQuality
SIO_000300: 2.093304e6

MQ
type: SiteQuality
SIO_000300: 5.991e1

VQSLOD
type: SiteQuality
SIO_000300: 4.48e-1

QD
type: SiteQuality
SIO_000300: 1.519e1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 2240
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GenotypeQuality
all individuals: 648
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 3481
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GenotypeQuality
all individuals: 949
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 12266
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GenotypeQuality
all individuals: 2983
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GenotypeQuality
all individuals: 239
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GenotypeQuality
all individuals: 449
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GenotypeQuality
all individuals: 22305
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GenotypeQuality
all individuals: 1593
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GenotypeQuality
all individuals: 353
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GenotypeQuality
all individuals: 4368
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variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.5e-2

QD
type: SiteQuality
SIO_000300: 1.191e1

FS
type: SiteQuality
SIO_000300: 6.495e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.299e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 2.079888e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 13127
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 2546
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GenotypeQuality
all individuals: 3097
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variant carriers: 0

GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 2832
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variant carriers: 0

GenotypeQuality
all individuals: 1685
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variant carriers: 0

GenotypeQuality
all individuals: 1668
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 3717
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GenotypeQuality
all individuals: 4247
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GenotypeQuality
all individuals: 6067
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GenotypeQuality
all individuals: 1585
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GenotypeQuality
all individuals: 12265
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GenotypeQuality
all individuals: 2234
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variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

DP
type: SiteQuality
SIO_000300: 2.034832e6

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.64e-1

QD
type: SiteQuality
SIO_000300: 1.448e1

GenotypeQuality
all individuals: 2599
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4806
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18119
bin: 9.75e1
variant carriers: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998620317327015e-5
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.129e0

DP
type: SiteQuality
SIO_000300: 2.137794e6

FS
type: SiteQuality
SIO_000300: 8.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
all individuals: 138
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variant carriers: 0

GenotypeQuality
all individuals: 4015
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.241396025206011e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 1.2358e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.215e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

DP
type: SiteQuality
SIO_000300: 2.141509e6

VQSLOD
type: SiteQuality
SIO_000300: -1.554e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

QD
type: SiteQuality
SIO_000300: 1.289e1

GenotypeQuality
all individuals: 18092
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.498e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQ
type: SiteQuality
SIO_000300: 5.898e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 2.142392e6

QD
type: SiteQuality
SIO_000300: 1.462e1

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2621
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 127
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18092
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.342e0

DP
type: SiteQuality
SIO_000300: 2.143652e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.301e0

QD
type: SiteQuality
SIO_000300: 1.149e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
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variant carriers: 0

GenotypeQuality
all individuals: 3505
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variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5199
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.933861922258751e-4
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42306760358614e-4
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.258e0

FS
type: SiteQuality
SIO_000300: 5.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 2.145191e6

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.335e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.549e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

QD
type: SiteQuality
SIO_000300: 1.6e1

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

DP
type: SiteQuality
SIO_000300: 2.146393e6

GenotypeQuality
all individuals: 5208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.309e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

DP
type: SiteQuality
SIO_000300: 2.146461e6

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.075e0

MQRankSum
type: SiteQuality
SIO_000300: -1.285e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.48e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.431e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.215e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.2761e1

DP
type: SiteQuality
SIO_000300: 2.147405e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQRankSum
type: SiteQuality
SIO_000300: -1.203e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

VQSLOD
type: SiteQuality
SIO_000300: -2.304e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.890173410404624e-4
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 6.07e-1

MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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SIO_000300: -1.056e0

InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

DP
type: SiteQuality
SIO_000300: 2.1494e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.183137525915688e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

FS
type: SiteQuality
SIO_000300: 2.162e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.88e-1

QD
type: SiteQuality
SIO_000300: 1.553e1

DP
type: SiteQuality
SIO_000300: 2.149643e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.941e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.445e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.149754e6

VQSLOD
type: SiteQuality
SIO_000300: 2.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.677e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.41e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.941e0

BaseQRankSum
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SIO_000300: -1.445e0

DP
type: SiteQuality
SIO_000300: 2.149754e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
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South Asian
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East Asian
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allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

Latino
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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QD
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MQ
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GenotypeQuality
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variant carriers: 79

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 5.183137525915688e-4
allele num: 11576
num of homozygotes: 0

African
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allele count: 73
allele frequency: 7.019230769230769e-3
allele num: 10400
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South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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ClippingRankSum
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
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African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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South Asian
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele num: 908
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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South Asian
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BaseQRankSum
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SIO_000300: -2.997e0

ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

African
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allele count: 13
allele frequency: 1.249279261964251e-3
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.953e1

MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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QD
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
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allele num: 66738
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 8.088745088976196e-4
allele num: 8654
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Other
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VQSLOD
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QD
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FS
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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European (Finnish)
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European (Non-Finnish)
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allele count: 1
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allele num: 66738
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African
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South Asian
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Latino
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
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African
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South Asian
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East Asian
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DP
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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European (Finnish)
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East Asian
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South Asian
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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East Asian
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Other
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African
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South Asian
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VQSLOD
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InbreedingCoeff
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DP
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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QD
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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African
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East Asian
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Latino
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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MQ
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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FS
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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DP
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VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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African
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South Asian
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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East Asian
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VQSLOD
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MQRankSum
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FS
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QD
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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European (Finnish)
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African
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VQSLOD
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QD
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FS
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MQRankSum
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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African
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.144023e6

QD
type: SiteQuality
SIO_000300: 1.162e1

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.34e-1

FS
type: SiteQuality
SIO_000300: 6.936e0

MQ
type: SiteQuality
SIO_000300: 5.279e1

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4038
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18058
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.908e0

DP
type: SiteQuality
SIO_000300: 2.144105e6

MQRankSum
type: SiteQuality
SIO_000300: 8.77e-1

QD
type: SiteQuality
SIO_000300: 1.11e1

FS
type: SiteQuality
SIO_000300: 7.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999400119976005e-5
allele num: 66680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 2.141931e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e0

FS
type: SiteQuality
SIO_000300: 2.549e0

VQSLOD
type: SiteQuality
SIO_000300: 6.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.371e1

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4033
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.139731e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.42e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.824e0

MQ
type: SiteQuality
SIO_000300: 5.824e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.642e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e-1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1082
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4793
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variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5096
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510574018126888e-5
allele num: 66200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.101042e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.893e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 2.097e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 485
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6081
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4769
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GenotypeQuality
all individuals: 12999
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512035805007863e-5
allele num: 66136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 6.255e0

MQRankSum
type: SiteQuality
SIO_000300: -5.595e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

MQ
type: SiteQuality
SIO_000300: 4.981e1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 2.090697e6

QD
type: SiteQuality
SIO_000300: 1.073e1

GenotypeQuality
all individuals: 18025
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4000
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GenotypeQuality
all individuals: 668
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GenotypeQuality
all individuals: 3310
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5018
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514142087093453e-5
allele num: 66044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

MQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 5.712e0

MQ
type: SiteQuality
SIO_000300: 6.024e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 2.066555e6

QD
type: SiteQuality
SIO_000300: 1.372e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5018
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.842299189388357e-4
allele num: 16284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028284174186906e-5
allele num: 66044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

FS
type: SiteQuality
SIO_000300: 5.712e0

QD
type: SiteQuality
SIO_000300: 1.372e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 2.066555e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

MQ
type: SiteQuality
SIO_000300: 6.024e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 740
bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 147
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9870
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variant carriers: 0

GenotypeQuality
all individuals: 4977
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.893e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.096e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.051026e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

GenotypeQuality
all individuals: 235
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18018
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4726
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.587483686910074e-5
allele num: 65898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

QD
type: SiteQuality
SIO_000300: 1.473e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

DP
type: SiteQuality
SIO_000300: 2.037786e6