11-64375511-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375511
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375511
    reference: chr 11
allele count: 3
allele frequency: 7.204610951008646e-5
allele num: 41640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1367C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4296C>A
  hgvsp: ENSP00000265459.5:p.Asp1432Glu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4086C>A
  hgvsp: ENSP00000366782.3:p.Asp1362Glu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4275C>A
  hgvsp: ENSP00000386416.1:p.Asp1425Glu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4296C>A
  hgvsp: ENSP00000366774.1:p.Asp1432Glu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1158C>A
  hgvsp: ENSP00000301894.2:p.Asp386Glu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-539C>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28678
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7304
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp1432Glu
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

11-64375534-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375534
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375534
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 54236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4273A>G
  hgvsp: ENSP00000366774.1:p.Ile1425Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-562A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1344A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4273A>G
  hgvsp: ENSP00000265459.5:p.Ile1425Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1135A>G
  hgvsp: ENSP00000301894.2:p.Ile379Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4063A>G
  hgvsp: ENSP00000366782.3:p.Ile1355Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4252A>G
  hgvsp: ENSP00000386416.1:p.Ile1418Val
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25716
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26435
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile1425Val
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/11-64375549-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375549
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375549
    reference: chr 11
allele count: 1
allele frequency: 1.692734782314307e-5
allele num: 59076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1120G>T
  hgvsp: ENSP00000301894.2:p.Glu374Ter
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4258G>T
  hgvsp: ENSP00000265459.5:p.Glu1420Ter
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-577G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4258G>T
  hgvsp: ENSP00000366774.1:p.Glu1420Ter
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4048G>T
  hgvsp: ENSP00000366782.3:p.Glu1350Ter
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1329G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4237G>T
  hgvsp: ENSP00000386416.1:p.Glu1413Ter
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25019
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu1420Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-64375561-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375561
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375559
    reference: chr 11
allele count: 1
allele frequency: 1.6433313613357e-5
allele num: 60852
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4253-9_4253-8delTT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1324-9_1324-8delTT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4043-9_4043-8delTT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4253-9_4253-8delTT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4232-9_4232-8delTT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-591_124-590delTT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1115-9_1115-8delTT
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24965
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 6.75e1
  variant carriers: 0
hgvs: c.4253-9_4253-8delTT
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: CAA
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

11-64375562-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375562
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375562
    reference: chr 11
allele count: 1
allele frequency: 1.644141922330736e-5
allele num: 60822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4253-8T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4253-8T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1115-8T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-590T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4232-8T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4043-8T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1324-8T>C
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24383
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
hgvs: c.4253-8T>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-64375562-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375562
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375560
    reference: chr 11
allele count: 1
allele frequency: 1.644141922330736e-5
allele num: 60822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-592_124-591delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4253-10_4253-9delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1115-10_1115-9delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1324-10_1324-9delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4253-10_4253-9delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4232-10_4232-9delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4043-10_4043-9delCT
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: AAG
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

11-64375564-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375564
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375564
    reference: chr 11
allele count: 1
allele frequency: 1.637947978772194e-5
allele num: 61052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1324-10C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4043-10C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-592C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1115-10C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4253-10C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4253-10C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4232-10C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14206
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24623
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14920
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

11-64375570-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375570
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375570
    reference: chr 11
allele count: 2
allele frequency: 3.249285157265401e-5
allele num: 61552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1324-16C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1115-16C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4232-16C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4043-16C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4253-16C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-598C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4253-16C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13401
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8727
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4607
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

11-64375578-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64375578
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64375576
    reference: chr 11
allele count: 1
allele frequency: 1.614987080103359e-5
allele num: 61920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1324-26_1324-25delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4253-26_4253-25delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.124-608_124-607delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4253-26_4253-25delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4043-26_4043-25delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4232-26_4232-25delCT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1115-26_1115-25delCT
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9329
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: AAG
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-64387716-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387716
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387716
    reference: chr 11
allele count: 2
allele frequency: 1.0315659170621e-4
allele num: 19388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+50T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+50T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+50T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+50T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+50T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+50T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+50T>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10967
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-64387717-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387717
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387717
    reference: chr 11
allele count: 3
allele frequency: 1.543051126427322e-4
allele num: 19442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+49C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+49C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+49C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+49C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+49C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+49C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+49C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10993
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

11-64387722-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387722
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387722
    reference: chr 11
allele count: 1
allele frequency: 5.109862033725089e-5
allele num: 19570
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+44T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+44T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+44T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+44T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+44T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+44T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+44T>C
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8501
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22927
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-64387724-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387724
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387724
    reference: chr 11
allele count: 1
allele frequency: 5.114043162524292e-5
allele num: 19554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+42G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+42G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+42G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+42G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+42G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+42G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+42G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23269
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

11-64387725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387725
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387725
    reference: chr 11
allele count: 4
allele frequency: 2.042066571370227e-4
allele num: 19588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+41C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+41C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+41C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+41C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+41C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+41C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+41C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32380
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7603
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24106
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

11-64387727-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387727
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387726
    reference: chr 11
allele count: 1
allele frequency: 5.091131249363608e-5
allele num: 19642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+38delC
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+38delC
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+38delC
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+38delC
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+38delC
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+38delC
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+38delC
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32706
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25515
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6544
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: AG
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

11-64387736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387736
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387736
    reference: chr 11
allele count: 1
allele frequency: 5.072537283149031e-5
allele num: 19714
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+30G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+30G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+30G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+30G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+30G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+30G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+30G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5282
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27757
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-64387737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387737
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387737
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 19770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+29C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+29C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+29C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+29C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+29C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+29C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+29C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33755
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4344
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

11-64387748-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387748
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387748
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 20042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+18C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+18C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+18C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+18C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+18C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+18C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+18C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

11-64387749-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387749
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387749
    reference: chr 11
allele count: 1
allele frequency: 4.969191015702644e-5
allele num: 20124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+17C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+17C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+17C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+17C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+17C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+17C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+17C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31799
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-64387753-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387753
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387753
    reference: chr 11
allele count: 1
allele frequency: 4.930480228774283e-5
allele num: 20282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+13C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+13C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2791
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

11-64387756-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387756
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387756
    reference: chr 11
allele count: 4
allele frequency: 1.960592098813842e-4
allele num: 20402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.123+10T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1114+10T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1323+10T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4042+10T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4252+10T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4252+10T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4231+10T>C
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

11-64387769-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387769
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387769
    reference: chr 11
allele count: 3
allele frequency: 1.447596988998263e-4
allele num: 20724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4039A>G
  hgvsp: ENSP00000366782.3:p.Thr1347Ala
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1320A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4249A>G
  hgvsp: ENSP00000265459.5:p.Thr1417Ala
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4228A>G
  hgvsp: ENSP00000386416.1:p.Thr1410Ala
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4249A>G
  hgvsp: ENSP00000366774.1:p.Thr1417Ala
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1111A>G
  hgvsp: ENSP00000301894.2:p.Thr371Ala
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.120A>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4344
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33095
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr1417Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

11-64387790-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387790
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387790
    reference: chr 11
allele count: 1
allele frequency: 4.745634016704632e-5
allele num: 21072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4018C>T
  hgvsp: ENST00000377559.3:c.4018C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.99C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4228C>T
  hgvsp: ENST00000265459.6:c.4228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1090C>T
  hgvsp: ENST00000301894.2:c.1090C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4228C>T
  hgvsp: ENST00000377551.1:c.4228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4207C>T
  hgvsp: ENST00000409571.1:c.4207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1299C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8846
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32048
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu1410Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-64387803-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387803
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387803
    reference: chr 11
allele count: 1
allele frequency: 4.721435316336166e-5
allele num: 21180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4215C>A
  hgvsp: ENSP00000366774.1:p.Ser1405Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4194C>A
  hgvsp: ENSP00000386416.1:p.Ser1398Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.86C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.4005C>A
  hgvsp: ENSP00000366782.3:p.Ser1335Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1077C>A
  hgvsp: ENSP00000301894.2:p.Ser359Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4215C>A
  hgvsp: ENSP00000265459.5:p.Ser1405Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1286C>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31644
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser1405Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

11-64387812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387812
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387812
    reference: chr 11
allele count: 1
allele frequency: 4.705439488048184e-5
allele num: 21252
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4206G>A
  hgvsp: ENST00000265459.6:c.4206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4185G>A
  hgvsp: ENST00000409571.1:c.4185G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1068G>A
  hgvsp: ENST00000301894.2:c.1068G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3996G>A
  hgvsp: ENST00000377559.3:c.3996G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.77G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4206G>A
  hgvsp: ENST00000377551.1:c.4206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1277G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10671
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32095
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8623
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu1402Glu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-64387829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387829
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387829
    reference: chr 11
allele count: 1
allele frequency: 4.718316504671134e-5
allele num: 21194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3979C>T
  hgvsp: ENST00000377559.3:c.3979C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.60C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4189C>T
  hgvsp: ENST00000377551.1:c.4189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1051C>T
  hgvsp: ENST00000301894.2:c.1051C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1260C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4168C>T
  hgvsp: ENST00000409571.1:c.4168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4189C>T
  hgvsp: ENST00000265459.6:c.4189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu1397Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

11-64387831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387831
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387831
    reference: chr 11
allele count: 1
allele frequency: 4.719207173194903e-5
allele num: 21190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.58T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3977T>C
  hgvsp: ENSP00000366782.3:p.Leu1326Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1258T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4187T>C
  hgvsp: ENSP00000366774.1:p.Leu1396Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1049T>C
  hgvsp: ENSP00000301894.2:p.Leu350Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4166T>C
  hgvsp: ENSP00000386416.1:p.Leu1389Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4187T>C
  hgvsp: ENSP00000265459.5:p.Leu1396Pro
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4344
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33510
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu1396Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

11-64387850-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387850
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387850
    reference: chr 11
allele count: 1
allele frequency: 4.768717215069146e-5
allele num: 20970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.45-6C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1036-6C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4153-6C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3964-6C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1245-6C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4174-6C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4174-6C>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
hgvs: c.4174-6C>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-64387854-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387854
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387854
    reference: chr 11
allele count: 2
allele frequency: 9.59048623765225e-5
allele num: 20854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4153-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1245-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.45-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4174-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3964-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4174-10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1036-10C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4345
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3037
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

11-64387862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387862
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387862
    reference: chr 11
allele count: 73
allele frequency: 3.515700250433442e-3
allele num: 20764
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4174-18C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4174-18C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4153-18C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1245-18C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1036-18C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.45-18C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3964-18C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 33319
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 6.25e1
  variant carriers: 2
num of homozygotes: 1
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

11-64387875-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387875
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387875
    reference: chr 11
allele count: 1
allele frequency: 4.862867146469558e-5
allele num: 20564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3964-31C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4174-31C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1245-31C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.45-31C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4153-31C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1036-31C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4174-31C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5983
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

11-64387876-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387876
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387876
    reference: chr 11
allele count: 3
allele frequency: 1.458860143940867e-4
allele num: 20564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4174-32T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1036-32T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4153-32T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1245-32T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4174-32T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.45-32T>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3964-32T>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5785
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

11-64387892-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64387892
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64387892
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 20148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1036-48T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.45-48T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1245-48T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4174-48T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4153-48T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3964-48T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4174-48T>C
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 29348
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10742
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64390174-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390174
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390174
    reference: chr 11
allele count: 5
allele frequency: 4.278038262774222e-5
allele num: 116876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+51G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+51G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+51G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+51G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+51G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+51G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+51G>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28128
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9919
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37434
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-64390177-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390177
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390177
    reference: chr 11
allele count: 6
allele frequency: 5.128731151913017e-5
allele num: 116988
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+48T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+48T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+48T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+48T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+48T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+48T>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+48T>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37587
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9913
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

11-64390179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390179
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390179
    reference: chr 11
allele count: 3
allele frequency: 2.56502334171241e-5
allele num: 116958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+46G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+46G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+46G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+46G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+46G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+46G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+46G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37788
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/11-64390182-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390182
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390181
    reference: chr 11
allele count: 1
allele frequency: 8.538251366120219e-6
allele num: 117120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+42delT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+42delT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+42delT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+42delT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+42delT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+42delT
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+42delT
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9928
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: CA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

11-64390189-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390189
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390189
    reference: chr 11
allele count: 3
allele frequency: 2.556062981391861e-5
allele num: 117368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+36G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+36G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+36G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+36G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+36G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+36G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+36G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-64390191-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390191
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390191
    reference: chr 11
allele count: 3
allele frequency: 2.552496341421911e-5
allele num: 117532
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+34G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+34G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+34G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+34G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+34G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+34G>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+34G>C
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-64390205-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390205
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390205
    reference: chr 11
allele count: 1
allele frequency: 8.412693071305987e-6
allele num: 118868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+20G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+20G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+20G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+20G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+20G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+20G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+20G>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

11-64390215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390215
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390215
    reference: chr 11
allele count: 1
allele frequency: 8.348220994106157e-6
allele num: 119786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4152+10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3963+10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4173+10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1035+10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1244+10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4173+10C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.44+10C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10224
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-64390229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390229
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390229
    reference: chr 11
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4148C>T
  hgvsp: ENSP00000386416.1:p.Thr1383Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.40C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.824C>T
  hgvsp: ENSP00000407374.1:p.Thr275Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3959C>T
  hgvsp: ENSP00000366782.3:p.Thr1320Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1240C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4169C>T
  hgvsp: ENSP00000366774.1:p.Thr1390Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1031C>T
  hgvsp: ENSP00000301894.2:p.Thr344Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4169C>T
  hgvsp: ENSP00000265459.5:p.Thr1390Ile
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29404
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42443
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr1390Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-64390236-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390236
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390236
    reference: chr 11
allele count: 2
allele frequency: 1.658622348277521e-5
allele num: 120582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1024A>G
  hgvsp: ENSP00000301894.2:p.Ser342Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4141A>G
  hgvsp: ENSP00000386416.1:p.Ser1381Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1233A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4162A>G
  hgvsp: ENSP00000265459.5:p.Ser1388Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.33A>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.817A>G
  hgvsp: ENSP00000407374.1:p.Ser273Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3952A>G
  hgvsp: ENSP00000366782.3:p.Ser1318Gly
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4162A>G
  hgvsp: ENSP00000366774.1:p.Ser1388Gly
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42493
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser1388Gly
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

11-64390237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390237
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390237
    reference: chr 11
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4140C>T
  hgvsp: ENST00000409571.1:c.4140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4161C>T
  hgvsp: ENST00000265459.6:c.4161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4161C>T
  hgvsp: ENST00000377551.1:c.4161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3951C>T
  hgvsp: ENST00000377559.3:c.3951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1023C>T
  hgvsp: ENST00000301894.2:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1232C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.816C>T
  hgvsp: ENST00000423049.1:c.816C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.32C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42540
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp1387Asp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ

11-64390249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390249
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390249
    reference: chr 11
allele count: 30
allele frequency: 2.486490070616318e-4
allele num: 120652
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4149C>T
  hgvsp: ENST00000265459.6:c.4149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1220C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.804C>T
  hgvsp: ENST00000423049.1:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3939C>T
  hgvsp: ENST00000377559.3:c.3939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4149C>T
  hgvsp: ENST00000377551.1:c.4149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1011C>T
  hgvsp: ENST00000301894.2:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4128C>T
  hgvsp: ENST00000409571.1:c.4128C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.20C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29581
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro1383Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

11-64390249-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390249
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390249
    reference: chr 11
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3939C>G
  hgvsp: ENST00000377559.3:c.3939C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.804C>G
  hgvsp: ENST00000423049.1:c.804C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.20C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1011C>G
  hgvsp: ENST00000301894.2:c.1011C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1220C>G
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4149C>G
  hgvsp: ENST00000377551.1:c.4149C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4149C>G
  hgvsp: ENST00000265459.6:c.4149C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4128C>G
  hgvsp: ENST00000409571.1:c.4128C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro1383Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-64390249-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390249
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390249
    reference: chr 11
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.20C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1011C>A
  hgvsp: ENST00000301894.2:c.1011C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3939C>A
  hgvsp: ENST00000377559.3:c.3939C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.804C>A
  hgvsp: ENST00000423049.1:c.804C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4128C>A
  hgvsp: ENST00000409571.1:c.4128C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4149C>A
  hgvsp: ENST00000265459.6:c.4149C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4149C>A
  hgvsp: ENST00000377551.1:c.4149C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1220C>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro1383Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

11-64390258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390258
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390258
    reference: chr 11
allele count: 12
allele frequency: 9.971249563757831e-5
allele num: 120346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.795C>T
  hgvsp: ENST00000423049.1:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4140C>T
  hgvsp: ENST00000377551.1:c.4140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4119C>T
  hgvsp: ENST00000409571.1:c.4119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3930C>T
  hgvsp: ENST00000377559.3:c.3930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4140C>T
  hgvsp: ENST00000265459.6:c.4140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.11C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.1002C>T
  hgvsp: ENST00000301894.2:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1211C>T
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9887
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly1380Gly
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-64390262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390262
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390262
    reference: chr 11
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4136G>A
  hgvsp: ENSP00000265459.5:p.Arg1379Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.7G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4115G>A
  hgvsp: ENSP00000386416.1:p.Arg1372Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.791G>A
  hgvsp: ENSP00000407374.1:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4136G>A
  hgvsp: ENSP00000366774.1:p.Arg1379Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.998G>A
  hgvsp: ENSP00000301894.2:p.Arg333Gln
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1207G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3926G>A
  hgvsp: ENSP00000366782.3:p.Arg1309Gln
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9788
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg1379Gln
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-64390265-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390265
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390265
    reference: chr 11
allele count: 1
allele frequency: 8.327642777435419e-6
allele num: 120082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4133G>T
  hgvsp: ENSP00000366774.1:p.Arg1378Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.995G>T
  hgvsp: ENSP00000301894.2:p.Arg332Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3923G>T
  hgvsp: ENSP00000366782.3:p.Arg1308Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1204G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.788G>T
  hgvsp: ENSP00000407374.1:p.Arg263Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4112G>T
  hgvsp: ENSP00000386416.1:p.Arg1371Leu
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.4G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4133G>T
  hgvsp: ENSP00000265459.5:p.Arg1378Leu
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10723
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg1378Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-64390267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390267
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390267
    reference: chr 11
allele count: 1
allele frequency: 8.334027835652971e-6
allele num: 119990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1202G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.993G>A
  hgvsp: ENST00000301894.2:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3921G>A
  hgvsp: ENST00000377559.3:c.3921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4131G>A
  hgvsp: ENST00000377551.1:c.4131G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.786G>A
  hgvsp: ENST00000423049.1:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4110G>A
  hgvsp: ENST00000409571.1:c.4110G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.2G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4131G>A
  hgvsp: ENST00000265459.6:c.4131G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr1377Thr
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

11-64390268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390268
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390268
    reference: chr 11
allele count: 1
allele frequency: 8.351567589236499e-6
allele num: 119738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.785C>T
  hgvsp: ENSP00000407374.1:p.Thr262Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4130C>T
  hgvsp: ENSP00000366774.1:p.Thr1377Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3920C>T
  hgvsp: ENSP00000366782.3:p.Thr1307Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4130C>T
  hgvsp: ENSP00000265459.5:p.Thr1377Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1201C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.992C>T
  hgvsp: ENSP00000301894.2:p.Thr331Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000475737
  gene symbol: NRXN2
  hgvsc: ENST00000475737.1:n.1C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4109C>T
  hgvsp: ENSP00000386416.1:p.Thr1370Met
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29583
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40240
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1377Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

11-64390273-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390273
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390273
    reference: chr 11
allele count: 1
allele frequency: 8.358548287333457e-6
allele num: 119638
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.780C>G
  hgvsp: ENST00000423049.1:c.780C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4125C>G
  hgvsp: ENST00000265459.6:c.4125C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.987C>G
  hgvsp: ENST00000301894.2:c.987C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4104C>G
  hgvsp: ENST00000409571.1:c.4104C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3915C>G
  hgvsp: ENST00000377559.3:c.3915C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4125C>G
  hgvsp: ENST00000377551.1:c.4125C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1196C>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr1375Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

11-64390285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390285
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390285
    reference: chr 11
allele count: 2
allele frequency: 1.683643404326963e-5
allele num: 118790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4092C>T
  hgvsp: ENST00000409571.1:c.4092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.768C>T
  hgvsp: ENST00000423049.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4113C>T
  hgvsp: ENST00000377551.1:c.4113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3903C>T
  hgvsp: ENST00000377559.3:c.3903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4113C>T
  hgvsp: ENST00000265459.6:c.4113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1184C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.975C>T
  hgvsp: ENST00000301894.2:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr1371Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

11-64390285-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390285
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390285
    reference: chr 11
allele count: 2
allele frequency: 1.683643404326963e-5
allele num: 118790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.768C>A
  hgvsp: ENST00000423049.1:c.768C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.975C>A
  hgvsp: ENST00000301894.2:c.975C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1184C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4113C>A
  hgvsp: ENST00000377551.1:c.4113C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4092C>A
  hgvsp: ENST00000409571.1:c.4092C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4113C>A
  hgvsp: ENST00000265459.6:c.4113C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3903C>A
  hgvsp: ENST00000377559.3:c.3903C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr1371Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

11-64390286-GTGGTGGTAGTCTCCATGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390286
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390268
    reference: chr 11
allele count: 1
allele frequency: 8.418075291265404e-6
allele num: 118792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsp: ENSP00000301894.2:p.Ile319_Thr324del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsp: ENSP00000265459.5:p.Ile1365_Thr1370del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsp: ENSP00000366782.3:p.Ile1295_Thr1300del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsp: ENSP00000407374.1:p.Ile250_Thr255del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsp: ENSP00000386416.1:p.Ile1358_Thr1363del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsp: ENSP00000366774.1:p.Ile1365_Thr1370del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37716
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile1365_Thr1370del
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: GTGGTGGTAGTCTCCATGA
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-64390294-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390294
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390294
    reference: chr 11
allele count: 2
allele frequency: 1.688932425813643e-5
allele num: 118418
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3894T>C
  hgvsp: ENST00000377559.3:c.3894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4104T>C
  hgvsp: ENST00000377551.1:c.4104T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1175T>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.966T>C
  hgvsp: ENST00000301894.2:c.966T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.759T>C
  hgvsp: ENST00000423049.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4104T>C
  hgvsp: ENST00000265459.6:c.4104T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4083T>C
  hgvsp: ENST00000409571.1:c.4083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25667
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3278
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37708
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr1368Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

11-64390305-TGGTGGTGGCCATGTCAGCCAGCAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390305
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390281
    reference: chr 11
allele count: 1
allele frequency: 8.483922965979469e-6
allele num: 117870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsp: ENSP00000386416.1:p.Leu1350_Thr1357del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsp: ENSP00000301894.2:p.Leu311_Thr318del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsp: ENSP00000265459.5:p.Leu1357_Thr1364del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsp: ENSP00000366782.3:p.Leu1287_Thr1294del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsp: ENSP00000407374.1:p.Leu242_Thr249del
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsp: ENSP00000366774.1:p.Leu1357_Thr1364del
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36701
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1357_Thr1364del
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: TGGTGGTGGCCATGTCAGCCAGCAG
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

11-64390314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390314
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390314
    reference: chr 11
allele count: 1
allele frequency: 8.545693824881643e-6
allele num: 117018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.946G>A
  hgvsp: ENSP00000301894.2:p.Ala316Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4084G>A
  hgvsp: ENSP00000366774.1:p.Ala1362Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4084G>A
  hgvsp: ENSP00000265459.5:p.Ala1362Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3874G>A
  hgvsp: ENSP00000366782.3:p.Ala1292Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4063G>A
  hgvsp: ENSP00000386416.1:p.Ala1355Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1155G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.739G>A
  hgvsp: ENSP00000407374.1:p.Ala247Thr
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22797
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6445
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala1362Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64390328-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390328
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390328
    reference: chr 11
allele count: 1
allele frequency: 8.575446780777278e-6
allele num: 116612
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4070T>G
  hgvsp: ENSP00000366774.1:p.Leu1357Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4049T>G
  hgvsp: ENSP00000386416.1:p.Leu1350Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.932T>G
  hgvsp: ENSP00000301894.2:p.Leu311Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.725T>G
  hgvsp: ENSP00000407374.1:p.Leu242Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3860T>G
  hgvsp: ENSP00000366782.3:p.Leu1287Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4070T>G
  hgvsp: ENSP00000265459.5:p.Leu1357Arg
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1141T>G
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21844
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu1357Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

11-64390339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390339
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390339
    reference: chr 11
allele count: 1
allele frequency: 8.630212648439658e-6
allele num: 115872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1130G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4038G>A
  hgvsp: ENST00000409571.1:c.4038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.921G>A
  hgvsp: ENST00000301894.2:c.921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4059G>A
  hgvsp: ENST00000377551.1:c.4059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.714G>A
  hgvsp: ENST00000423049.1:c.714G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4059G>A
  hgvsp: ENST00000265459.6:c.4059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3849G>A
  hgvsp: ENST00000377559.3:c.3849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr1353Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

11-64390340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390340
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390340
    reference: chr 11
allele count: 5
allele frequency: 4.316894598701478e-5
allele num: 115824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3848C>T
  hgvsp: ENSP00000366782.3:p.Thr1283Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4037C>T
  hgvsp: ENSP00000386416.1:p.Thr1346Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4058C>T
  hgvsp: ENSP00000366774.1:p.Thr1353Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.920C>T
  hgvsp: ENSP00000301894.2:p.Thr307Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4058C>T
  hgvsp: ENSP00000265459.5:p.Thr1353Met
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1129C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.713C>T
  hgvsp: ENSP00000407374.1:p.Thr238Met
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6161
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21512
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr1353Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

11-64390341-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390341
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390341
    reference: chr 11
allele count: 4
allele frequency: 3.44916788824696e-5
allele num: 115970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4057A>C
  hgvsp: ENSP00000366774.1:p.Thr1353Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4057A>C
  hgvsp: ENSP00000265459.5:p.Thr1353Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4036A>C
  hgvsp: ENSP00000386416.1:p.Thr1346Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.919A>C
  hgvsp: ENSP00000301894.2:p.Thr307Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3847A>C
  hgvsp: ENSP00000366782.3:p.Thr1283Pro
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1128A>C
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.712A>C
  hgvsp: ENSP00000407374.1:p.Thr238Pro
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20070
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21904
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr1353Pro
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/11-64390345-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390345
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390345
    reference: chr 11
allele count: 2
allele frequency: 1.727503584569938e-5
allele num: 115774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4032G>T
  hgvsp: ENSP00000386416.1:p.Glu1344Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4053G>T
  hgvsp: ENSP00000265459.5:p.Glu1351Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4053G>T
  hgvsp: ENSP00000366774.1:p.Glu1351Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.915G>T
  hgvsp: ENSP00000301894.2:p.Glu305Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1124G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.708G>T
  hgvsp: ENSP00000407374.1:p.Glu236Asp
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3843G>T
  hgvsp: ENSP00000366782.3:p.Glu1281Asp
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19778
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu1351Asp
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

11-64390348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390348
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390348
    reference: chr 11
allele count: 4
allele frequency: 3.461465238235345e-5
allele num: 115558
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4050G>A
  hgvsp: ENST00000265459.6:c.4050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1121G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3840G>A
  hgvsp: ENST00000377559.3:c.3840G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.912G>A
  hgvsp: ENST00000301894.2:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4050G>A
  hgvsp: ENST00000377551.1:c.4050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.705G>A
  hgvsp: ENST00000423049.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4029G>A
  hgvsp: ENST00000409571.1:c.4029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19801
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala1350Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-64390349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390349
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390349
    reference: chr 11
allele count: 9
allele frequency: 7.81629959007851e-5
allele num: 115144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4049C>T
  hgvsp: ENSP00000366774.1:p.Ala1350Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1120C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4049C>T
  hgvsp: ENSP00000265459.5:p.Ala1350Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4028C>T
  hgvsp: ENSP00000386416.1:p.Ala1343Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.704C>T
  hgvsp: ENSP00000407374.1:p.Ala235Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.911C>T
  hgvsp: ENSP00000301894.2:p.Ala304Val
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3839C>T
  hgvsp: ENSP00000366782.3:p.Ala1280Val
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19707
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22219
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33496
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Ala1350Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

11-64390350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390350
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390350
    reference: chr 11
allele count: 1
allele frequency: 8.664610265830243e-6
allele num: 115412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.703G>A
  hgvsp: ENSP00000407374.1:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4027G>A
  hgvsp: ENSP00000386416.1:p.Ala1343Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.910G>A
  hgvsp: ENSP00000301894.2:p.Ala304Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3838G>A
  hgvsp: ENSP00000366782.3:p.Ala1280Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4048G>A
  hgvsp: ENSP00000366774.1:p.Ala1350Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4048G>A
  hgvsp: ENSP00000265459.5:p.Ala1350Thr
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1119G>A
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala1350Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-64390352-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390352
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390352
    reference: chr 11
allele count: 1
allele frequency: 8.663709453839756e-6
allele num: 115424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4046G>T
  hgvsp: ENSP00000366774.1:p.Ser1349Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1117G>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4046G>T
  hgvsp: ENSP00000265459.5:p.Ser1349Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3836G>T
  hgvsp: ENSP00000366782.3:p.Ser1279Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.908G>T
  hgvsp: ENSP00000301894.2:p.Ser303Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4025G>T
  hgvsp: ENSP00000386416.1:p.Ser1342Ile
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.701G>T
  hgvsp: ENSP00000407374.1:p.Ser234Ile
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5123
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser1349Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

11-64390363-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390363
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390363
    reference: chr 11
allele count: 19
allele frequency: 1.65733326355088e-4
allele num: 114642
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4035C>T
  hgvsp: ENST00000265459.6:c.4035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4035C>T
  hgvsp: ENST00000377551.1:c.4035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3825C>T
  hgvsp: ENST00000377559.3:c.3825C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4014C>T
  hgvsp: ENST00000409571.1:c.4014C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.897C>T
  hgvsp: ENST00000301894.2:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1106C>T
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.690C>T
  hgvsp: ENST00000423049.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23416
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18849
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser1345Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

11-64390363-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390363
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390363
    reference: chr 11
allele count: 2
allele frequency: 1.744561330053558e-5
allele num: 114642
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4035C>A
  hgvsp: ENST00000265459.6:c.4035C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3825C>A
  hgvsp: ENST00000377559.3:c.3825C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4035C>A
  hgvsp: ENST00000377551.1:c.4035C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.897C>A
  hgvsp: ENST00000301894.2:c.897C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1106C>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.690C>A
  hgvsp: ENST00000423049.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4014C>A
  hgvsp: ENST00000409571.1:c.4014C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23416
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser1345Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

11-64390366-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390366
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390366
    reference: chr 11
allele count: 3
allele frequency: 2.619675509526887e-5
allele num: 114518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3822G>A
  hgvsp: ENST00000377559.3:c.3822G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4032G>A
  hgvsp: ENST00000377551.1:c.4032G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4011G>A
  hgvsp: ENST00000409571.1:c.4011G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1103G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4032G>A
  hgvsp: ENST00000265459.6:c.4032G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.894G>A
  hgvsp: ENST00000301894.2:c.894G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.687G>A
  hgvsp: ENST00000423049.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18653
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4923
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5902
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro1344Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

11-64390369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64390369
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64390369
    reference: chr 11
allele count: 1
allele frequency: 8.7470697316399e-6
allele num: 114324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110076
  ensembl transcript: ENST00000464307
  gene symbol: NRXN2
  hgvsc: ENST00000464307.1:n.1100G>A
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000407374
  ensembl transcript: ENST00000423049
  gene symbol: NRXN2
  hgvsc: ENST00000423049.1:c.684G>A
  hgvsp: ENST00000423049.1:c.684G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000265459
  ensembl transcript: ENST00000265459
  gene symbol: NRXN2
  hgvsc: ENST00000265459.6:c.4029G>A
  hgvsp: ENST00000265459.6:c.4029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000386416
  ensembl transcript: ENST00000409571
  gene symbol: NRXN2
  hgvsc: ENST00000409571.1:c.4008G>A
  hgvsp: ENST00000409571.1:c.4008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366774
  ensembl transcript: ENST00000377551
  gene symbol: NRXN2
  hgvsc: ENST00000377551.1:c.4029G>A
  hgvsp: ENST00000377551.1:c.4029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000366782
  ensembl transcript: ENST00000377559
  gene symbol: NRXN2
  hgvsc: ENST00000377559.3:c.3819G>A
  hgvsp: ENST00000377559.3:c.3819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110076
  ensembl protein: ENSP00000301894
  ensembl transcript: ENST00000301894
  gene symbol: NRXN2
  hgvsc: ENST00000301894.2:c.891G>A
  hgvsp: ENST00000301894.2:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8009
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly1343Gly
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 1274
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1598
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 28194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10545
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.386962552011096e-4
allele num: 21630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e-1

QD
type: SiteQuality
SIO_000300: 9.49e0

DP
type: SiteQuality
SIO_000300: 6.60979e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.26e-2

FS
type: SiteQuality
SIO_000300: 1.926e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.096e0

GenotypeQuality
all individuals: 235
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16593
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3220
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 7.76244e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 5.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.815e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 551
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1094
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.97991537040348e-5
allele num: 33558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

VQSLOD
type: SiteQuality
SIO_000300: -2.298e0

DP
type: SiteQuality
SIO_000300: 8.02787e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.293e0

QD
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.903e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16171
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4335
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3900
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.392344497607655e-3
allele num: 418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.706e1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

FS
type: SiteQuality
SIO_000300: 5.672e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.039e1

DP
type: SiteQuality
SIO_000300: 8.01218e5

GenotypeQuality
all individuals: 522
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2022
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.373042240151875e-4
allele num: 4214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34770
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.033e1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

DP
type: SiteQuality
SIO_000300: 7.93208e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

QD
type: SiteQuality
SIO_000300: 1.373e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.11e-1

GenotypeQuality
all individuals: 522
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24383
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1382
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14223
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.373042240151875e-4
allele num: 4214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.373e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

DP
type: SiteQuality
SIO_000300: 7.93208e5

MQ
type: SiteQuality
SIO_000300: 6.033e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

GenotypeQuality
all individuals: 358
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4435
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3916
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.061005770816158e-4
allele num: 4852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34928
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.873e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.294e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 3.426e0

DP
type: SiteQuality
SIO_000300: 7.94704e5

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

QD
type: SiteQuality
SIO_000300: 4.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 353
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24474
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35216
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.686035613870666e-4
allele num: 4268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3980
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.14e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.866e0

FS
type: SiteQuality
SIO_000300: 4.341e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.915e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.02e-1

QD
type: SiteQuality
SIO_000300: 6.17e0

DP
type: SiteQuality
SIO_000300: 7.87619e5

MQ
type: SiteQuality
SIO_000300: 5.452e1

GenotypeQuality
all individuals: 13545
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.819124943617501e-5
allele num: 35472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.78213e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.14e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.382e1

FS
type: SiteQuality
SIO_000300: 2.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.214e0

GenotypeQuality
all individuals: 908
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.520161290322581e-4
allele num: 7936
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1208e1

DP
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.66e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.77453447408153e-4
allele num: 7948
num of homozygotes: 0

InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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MQ
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.945e0

QD
type: SiteQuality
SIO_000300: 1.775e1

ReadPosRankSum
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SIO_000300: -1.271e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.267748478701826e-4
allele num: 7888
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8034
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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DP
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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QD
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FS
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BaseQRankSum
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SIO_000300: -4.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.2465719272002e-4
allele num: 8022
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African
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
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SIO_000300: 4.53414e5

ReadPosRankSum
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SIO_000300: 1.74e-1

QD
type: SiteQuality
SIO_000300: 9.33e0

InbreedingCoeff
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SIO_000300: -8.160000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.488e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.361e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 4
allele frequency: 5.074854097944684e-4
allele num: 7882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2514
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

DP
type: SiteQuality
SIO_000300: 4.55192e5

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 2.67379679144385e-3
allele num: 374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -7.91e-2

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ReadPosRankSum
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SIO_000300: -9.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 2538
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.267105930055753e-4
allele num: 7892
num of homozygotes: 0

FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

QD
type: SiteQuality
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MQ
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DP
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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African
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South Asian
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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QD
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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MQ
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ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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FS
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DP
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SIO_000300: 4.91139e5

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.480000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.265822784810127e-4
allele num: 7900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

MQRankSum
type: SiteQuality
SIO_000300: 2.86e0

VQSLOD
type: SiteQuality
SIO_000300: -2.112e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.36e-2

FS
type: SiteQuality
SIO_000300: 2.897e0

DP
type: SiteQuality
SIO_000300: 4.98032e5

QD
type: SiteQuality
SIO_000300: 1.065e1

GenotypeQuality
all individuals: 713
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.577319587628866e-3
allele num: 388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.531004808909137e-4
allele num: 7902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.841e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.290000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.526e1

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

DP
type: SiteQuality
SIO_000300: 5.04462e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.159e0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 15
bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1919
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 700
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GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.405994550408719e-4
allele num: 8808
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.98e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

DP
type: SiteQuality
SIO_000300: 5.23831e5

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 1507
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GenotypeQuality
all individuals: 406
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GenotypeQuality
all individuals: 3059
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variant carriers: 0

GenotypeQuality
all individuals: 4346
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 474
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.109877913429523e-4
allele num: 9010
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.349e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: -2.794e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.556e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.45e-2

DP
type: SiteQuality
SIO_000300: 5.50827e5

BaseQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4345
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 472
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 407
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3059
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 501
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.09962612711678e-4
allele num: 9094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.782e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.44e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

DP
type: SiteQuality
SIO_000300: 5.56524e5

QD
type: SiteQuality
SIO_000300: 2.853e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 4345
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 410
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variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.479289940828402e-3
allele num: 676
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.859e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.48e-2

QD
type: SiteQuality
SIO_000300: 7.18e0

MQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.849e0

DP
type: SiteQuality
SIO_000300: 5.5487e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 33387
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 470
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GenotypeQuality
all individuals: 7046
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 401
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GenotypeQuality
all individuals: 307
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GenotypeQuality
all individuals: 4344
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variant carriers: 1

GenotypeQuality
all individuals: 416
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.099384344766931e-4
allele num: 9096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.829e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.279e0

VQSLOD
type: SiteQuality
SIO_000300: -1.859e0

DP
type: SiteQuality
SIO_000300: 5.44276e5

MQ
type: SiteQuality
SIO_000300: 5.871e1

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 307
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GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.5486160397445e-4
allele num: 2818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9086
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

FS
type: SiteQuality
SIO_000300: 4.236e0

VQSLOD
type: SiteQuality
SIO_000300: -1.431e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.007e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.081e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.850000000000001e-2

DP
type: SiteQuality
SIO_000300: 5.4214e5

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8940
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.581661891117478e-4
allele num: 2792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.67e-1

DP
type: SiteQuality
SIO_000300: 5.15587e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 610
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GenotypeQuality
all individuals: 48
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 305
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GenotypeQuality
all individuals: 29
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.527805864509606e-4
allele num: 7912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.934e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.59e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.07135e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

VQSLOD
type: SiteQuality
SIO_000300: -2.878e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

QD
type: SiteQuality
SIO_000300: 1.111e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

GenotypeQuality
all individuals: 3450
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4390
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 463
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30304
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 127
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 388
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 384
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 67
allele frequency: 2.415284787310742e-2
allele num: 2774
num of homozygotes: 1

Latino
type: Population
allele count: 2
allele frequency: 4.878048780487805e-3
allele num: 410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 4.543389368468878e-4
allele num: 8804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.559e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

DP
type: SiteQuality
SIO_000300: 4.97928e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25175
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4340
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1979
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.149425287356322e-4
allele num: 8700
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.73078e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.51e0

MQRankSum
type: SiteQuality
SIO_000300: -2.069e0

FS
type: SiteQuality
SIO_000300: 4.397e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e-1

QD
type: SiteQuality
SIO_000300: 1.214e1

VQSLOD
type: SiteQuality
SIO_000300: -2.005e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.95e-2

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25422
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.564102564102564e-3
allele num: 390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.299379167624741e-4
allele num: 8698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.93e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.981e0

DP
type: SiteQuality
SIO_000300: 4.73118e5

QD
type: SiteQuality
SIO_000300: 1.264e1

GenotypeQuality
all individuals: 509
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18705
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4336
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.516e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.62e-2

DP
type: SiteQuality
SIO_000300: 4.56271e5

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.865706500583885e-4
allele num: 10276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65306
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

DP
type: SiteQuality
SIO_000300: 1.5939e6

QD
type: SiteQuality
SIO_000300: 1.12e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.266e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.435e0

FS
type: SiteQuality
SIO_000300: 1.756e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65318
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.83544057576347e-4
allele num: 10282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13748
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.341e1

FS
type: SiteQuality
SIO_000300: 1.745e0

DP
type: SiteQuality
SIO_000300: 1.594107e6

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 2743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.186270222999563e-4
allele num: 13722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.776e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 3.076e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.594775e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 160
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

FS
type: SiteQuality
SIO_000300: 3.893e0

QD
type: SiteQuality
SIO_000300: 1.35e1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.021e1

DP
type: SiteQuality
SIO_000300: 1.597483e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.853e0

GenotypeQuality
all individuals: 168
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1921
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9959
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.599653379549393e-4
allele num: 11540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.124e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.605799e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.457e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9985
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65474
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598302442404296e-4
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.633e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.714e0

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

DP
type: SiteQuality
SIO_000300: 1.608734e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.111e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.621639517944644e-5
allele num: 15102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.3e0

QD
type: SiteQuality
SIO_000300: 8.94e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.839e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.949e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

DP
type: SiteQuality
SIO_000300: 1.631516e6

GenotypeQuality
all individuals: 173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 76
bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66042
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.024e0

QD
type: SiteQuality
SIO_000300: 1.363e1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

DP
type: SiteQuality
SIO_000300: 1.644019e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.944e0

MQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509798592867711e-5
allele num: 66234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.652733e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 2.5147e1

QD
type: SiteQuality
SIO_000300: 1.549e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.462e0

VQSLOD
type: SiteQuality
SIO_000300: -4.472e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 2336
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

DP
type: SiteQuality
SIO_000300: 1.654815e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: 6.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.521e1

GenotypeQuality
all individuals: 2336
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 390
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variant carriers: 1

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 10296
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509115054931788e-5
allele num: 66264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.18e-1

DP
type: SiteQuality
SIO_000300: 1.655117e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.448e0

VQSLOD
type: SiteQuality
SIO_000300: -1.782e0

QD
type: SiteQuality
SIO_000300: 2.366e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 30

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.272137227630969e-4
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 1.936858415649816e-3
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-2

DP
type: SiteQuality
SIO_000300: 1.654092e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.109e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 5.76e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.38e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.654092e6

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.76e-1

VQSLOD
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InbreedingCoeff
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SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 347
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 231
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variant carriers: 0

GenotypeQuality
all individuals: 210
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.330482590103849e-4
allele num: 16370
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.537e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.31e1

DP
type: SiteQuality
SIO_000300: 1.63525e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.071e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65990
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

DP
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.374e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.516760200212346e-5
allele num: 65930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.842e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

QD
type: SiteQuality
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DP
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SIO_000300: 1.612215e6

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.054e0

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.192e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.602902e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521005080156968e-5
allele num: 65746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 1.585999e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.485e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522209029743965e-5
allele num: 65694
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.334267040149393e-4
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele num: 884
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65258
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.796622097114708e-5
allele num: 11368
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.532379171902295e-5
allele num: 65258
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6302
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East Asian
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VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
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DP
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FS
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 1.532238293699436e-5
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African
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Latino
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East Asian
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Other
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European (Finnish)
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MQ
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.074463506118183e-5
allele num: 65052
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

DP
type: SiteQuality
SIO_000300: 1.474221e6

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.857395925597875e-5
allele num: 11290
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64786
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 1.444164e6

MQ
type: SiteQuality
SIO_000300: 5.373e1

VQSLOD
type: SiteQuality
SIO_000300: -7.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.92e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.004217714400482e-4
allele num: 9958
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64310
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.417638e6

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.079e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9898
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558263471187709e-5
allele num: 64174
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.369e0

FS
type: SiteQuality
SIO_000300: 2.253e0

MQ
type: SiteQuality
SIO_000300: 5.898e1

VQSLOD
type: SiteQuality
SIO_000300: -9.684e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

QD
type: SiteQuality
SIO_000300: 7.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.2e-2

DP
type: SiteQuality
SIO_000300: 1.393183e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566416040100251e-5
allele num: 63840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.367906e6

FS
type: SiteQuality
SIO_000300: 3.749e0

VQSLOD
type: SiteQuality
SIO_000300: -6.506e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.054e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

GenotypeQuality
all individuals: 2005
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.268413464552121e-5
allele num: 63812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.018537380321858e-4
allele num: 9818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 1.742e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.36962e6

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.26017278076875e-5
allele num: 63896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 9.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 4.665e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.368733e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.134206732276061e-5
allele num: 63812
num of homozygotes: 0

East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16064
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5600
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Other
type: Population
allele count: 0
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VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.366988e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.246727340730582e-4
allele num: 16042
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5612
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.140506249607436e-5
allele num: 63684
num of homozygotes: 0

African
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East Asian
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Other
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

VQSLOD
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele num: 9750
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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Latino
type: Population
allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 8
allele frequency: 1.260239445494644e-4
allele num: 63480
num of homozygotes: 0

MQRankSum
type: SiteQuality
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FS
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VQSLOD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.022494887525562e-4
allele num: 9780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.238e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.257e0

DP
type: SiteQuality
SIO_000300: 1.361958e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.87e-1

QD
type: SiteQuality
SIO_000300: 7.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.69e-1

GenotypeQuality
all individuals: 36658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5600
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571981010469394e-5
allele num: 63614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11130
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.191e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.364464e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.521e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.511e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-1

GenotypeQuality
all individuals: 1879
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4937
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5827
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 9.75e1
variant carriers: 19

South Asian
type: Population
allele count: 19
allele frequency: 1.188539972475916e-3
allele num: 15986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.351112e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.238e1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 358
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1250
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5827
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4937
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15986
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188777936281503e-4
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581677843856763e-5
allele num: 63224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.238e1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 1.351112e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 255
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35330
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583832240489087e-5
allele num: 63138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11058
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.06654267410622e-4
allele num: 9678
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.212e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 1.107e0

DP
type: SiteQuality
SIO_000300: 1.345141e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0