11-47350227-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350227
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350227
    reference: chr 11
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4694T>C
  hgvsp: ENSP00000304505.6:p.Val1565Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4631T>C
  hgvsp: ENSP00000384287.2:p.Val1544Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4505T>C
  hgvsp: ENSP00000385585.1:p.Val1502Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.4741T>C
  hgvsp: ENSP00000378745.3:p.Trp1581Arg
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.535T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4493T>C
  hgvsp: ENSP00000378753.3:p.Val1498Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4811T>C
  hgvsp: ENSP00000310933.4:p.Val1604Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4634T>C
  hgvsp: ENSP00000343902.4:p.Val1545Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.4435T>C
  hgvsp: ENSP00000384435.1:p.Trp1479Arg
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4565T>C
  hgvsp: ENSP00000384204.3:p.Val1522Ala
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val1604Ala
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

11-47350266-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350266
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350266
    reference: chr 11
allele count: 2
allele frequency: 1.659888787451241e-5
allele num: 120490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+11C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+11C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

11-47350267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350267
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350267
    reference: chr 11
allele count: 1
allele frequency: 8.307855908547122e-6
allele num: 120368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+12G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+12G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

11-47350268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350268
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350268
    reference: chr 11
allele count: 1
allele frequency: 8.299306178003518e-6
allele num: 120492
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+13C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+13C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27909
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

11-47350274-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350274
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350274
    reference: chr 11
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+19C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+19C>G
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15606
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6966
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

11-47350277-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350277
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350277
    reference: chr 11
allele count: 18
allele frequency: 1.495538310706393e-4
allele num: 120358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+22G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+22G>C
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18979
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15348
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8353
  bin: 9.75e1
  variant carriers: 18
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

11-47350286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350286
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350286
    reference: chr 11
allele count: 220
allele frequency: 1.83180682764363e-3
allele num: 120100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+31C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+31C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 2.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16740
  bin: 2.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 4
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-47350287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350287
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350287
    reference: chr 11
allele count: 39614
allele frequency: 3.322095870651773e-1
allele num: 119244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+32G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+32G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.25e1
  variant carriers: 1964
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 9.75e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 2.25e1
  variant carriers: 5559
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.75e1
  variant carriers: 605
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 1.25e1
  variant carriers: 1020
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 5.75e1
  variant carriers: 779
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 1.75e1
  variant carriers: 3165
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 3.25e1
  variant carriers: 4891
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 3.75e1
  variant carriers: 3147
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 5.25e1
  variant carriers: 979
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 695
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 1277
genotype depth: GenotypeDepth
  all individuals: 13069
  bin: 2.75e1
  variant carriers: 6157
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 511
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 5.25e1
  variant carriers: 358
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 2.75e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 7.75e1
  variant carriers: 554
num of homozygotes: 7409
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-47350291-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350291
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350291
    reference: chr 11
allele count: 4
allele frequency: 3.355592094225026e-5
allele num: 119204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+36C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+36C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10548
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14371
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

11-47350292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350292
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350292
    reference: chr 11
allele count: 2
allele frequency: 1.681407001378754e-5
allele num: 118948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+37G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+37G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14399
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

11-47350297-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350297
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350297
    reference: chr 11
allele count: 1
allele frequency: 8.425877555147369e-6
allele num: 118682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+42G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+42G>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12870
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11735
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6707
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

11-47350298-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350298
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350298
    reference: chr 11
allele count: 1
allele frequency: 8.431703204047217e-6
allele num: 118600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+43C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+43C>G
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5243
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

11-47350305-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350305
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350305
    reference: chr 11
allele count: 1
allele frequency: 8.522824123001398e-6
allele num: 117332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*23+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4593+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.563+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4839+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4521+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4722+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4662+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*23+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4533+50G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4659+50G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3820
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

11-47350552-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350552
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350552
    reference: chr 11
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-45G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

11-47350553-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350553
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350553
    reference: chr 11
allele count: 48850
allele frequency: 4.031459413065725e-1
allele num: 121172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-44G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-44G>C
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 2.25e1
  variant carriers: 660
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.75e1
  variant carriers: 3573
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 3.25e1
  variant carriers: 1306
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 2.75e1
  variant carriers: 1055
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 6.75e1
  variant carriers: 3178
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 7.25e1
  variant carriers: 2670
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 1598
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.25e1
  variant carriers: 2049
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 9.75e1
  variant carriers: 5685
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 5.25e1
  variant carriers: 3280
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 8.75e1
  variant carriers: 1378
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 8.25e1
  variant carriers: 1694
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 4.75e1
  variant carriers: 2731
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 9.25e1
  variant carriers: 1161
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.75e1
  variant carriers: 2150
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 6.25e1
  variant carriers: 3432
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 6
num of homozygotes: 10879
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

11-47350553-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350553
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350554
    reference: chr 11
allele count: 8
allele frequency: 6.602185323342026e-5
allele num: 121172
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-44_4594-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-44_4840-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-44_*24-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-44_4534-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-44_4663-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-44_564-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-44_*24-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-44_4660-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-44_4723-43insC
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-44_4522-43insC
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

11-47350559-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350559
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350559
    reference: chr 11
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-38T>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-38T>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

11-47350562-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350562
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350562
    reference: chr 11
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-35C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-35C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3287
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

11-47350566-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350566
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350566
    reference: chr 11
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-31A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-31A>G
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum

11-47350568-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350568
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350568
    reference: chr 11
allele count: 4
allele frequency: 3.296848213108268e-5
allele num: 121328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-29C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3624
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

11-47350569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350569
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350569
    reference: chr 11
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-28G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-28G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

11-47350575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350575
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350575
    reference: chr 11
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-22C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-22C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

11-47350576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350576
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350576
    reference: chr 11
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-21G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-21G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3659
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6839
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

11-47350582-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350582
    reference: chr 11
allele count: 5
allele frequency: 4.119973632168754e-5
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-15T>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-15T>C
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-47350588-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350588
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350588
    reference: chr 11
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-9C>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-9C>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-47350590-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350590
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350590
    reference: chr 11
allele count: 46
allele frequency: 3.78987608752966e-4
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-7C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-7C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2003
  bin: 7.25e1
  variant carriers: 0
hgvs: c.4840-7C>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

11-47350591-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350591
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350591
    reference: chr 11
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4840-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4663-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*24-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*24-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4534-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.564-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4660-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4594-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4723-6C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4522-6C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: c.4840-6C>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-47350599-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350599
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350599
    reference: chr 11
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*26C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4842C>T
  hgvsp: ENST00000311027.5:c.4842C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4665C>T
  hgvsp: ENST00000342922.4:c.4665C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4662C>T
  hgvsp: ENST00000402192.2:c.4662C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4725C>T
  hgvsp: ENST00000349238.3:c.4725C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4536C>T
  hgvsp: ENST00000402799.1:c.4536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4596C>T
  hgvsp: ENST00000407859.3:c.4596C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.566C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4524C>T
  hgvsp: ENST00000395344.3:c.4524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.4842C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-47350602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350602
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350602
    reference: chr 11
allele count: 3
allele frequency: 2.471088267272907e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4668C>T
  hgvsp: ENST00000342922.4:c.4668C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4728C>T
  hgvsp: ENST00000349238.3:c.4728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4845C>T
  hgvsp: ENST00000311027.5:c.4845C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.569C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4665C>T
  hgvsp: ENST00000402192.2:c.4665C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4527C>T
  hgvsp: ENST00000395344.3:c.4527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4599C>T
  hgvsp: ENST00000407859.3:c.4599C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*29C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4539C>T
  hgvsp: ENST00000402799.1:c.4539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6965
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His1615His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

11-47350617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350617
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350617
    reference: chr 11
allele count: 13
allele frequency: 1.07073435904194e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*44C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.584C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4554C>T
  hgvsp: ENST00000402799.1:c.4554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4614C>T
  hgvsp: ENST00000407859.3:c.4614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4680C>T
  hgvsp: ENST00000402192.2:c.4680C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*44C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4860C>T
  hgvsp: ENST00000311027.5:c.4860C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4743C>T
  hgvsp: ENST00000349238.3:c.4743C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4542C>T
  hgvsp: ENST00000395344.3:c.4542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4683C>T
  hgvsp: ENST00000342922.4:c.4683C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser1620Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

11-47350618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350618
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350618
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4543G>A
  hgvsp: ENSP00000378753.3:p.Val1515Ile
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4681G>A
  hgvsp: ENSP00000384287.2:p.Val1561Ile
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4615G>A
  hgvsp: ENSP00000384204.3:p.Val1539Ile
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4861G>A
  hgvsp: ENSP00000310933.4:p.Val1621Ile
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.585G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4744G>A
  hgvsp: ENSP00000304505.6:p.Val1582Ile
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*45G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4555G>A
  hgvsp: ENSP00000385585.1:p.Val1519Ile
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4684G>A
  hgvsp: ENSP00000343902.4:p.Val1562Ile
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val1621Ile
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-47350632-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350632
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350632
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.599C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4698C>T
  hgvsp: ENST00000342922.4:c.4698C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*59C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4557C>T
  hgvsp: ENST00000395344.3:c.4557C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4629C>T
  hgvsp: ENST00000407859.3:c.4629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4569C>T
  hgvsp: ENST00000402799.1:c.4569C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4758C>T
  hgvsp: ENST00000349238.3:c.4758C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4875C>T
  hgvsp: ENST00000311027.5:c.4875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4695C>T
  hgvsp: ENST00000402192.2:c.4695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*59C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe1625Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

11-47350635-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350635
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350635
    reference: chr 11
allele count: 15
allele frequency: 1.235462721971469e-4
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4632G>A
  hgvsp: ENST00000407859.3:c.4632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.602G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4878G>A
  hgvsp: ENST00000311027.5:c.4878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4701G>A
  hgvsp: ENST00000342922.4:c.4701G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4761G>A
  hgvsp: ENST00000349238.3:c.4761G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*62G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4572G>A
  hgvsp: ENST00000402799.1:c.4572G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*62G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4560G>A
  hgvsp: ENST00000395344.3:c.4560G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4698G>A
  hgvsp: ENST00000402192.2:c.4698G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser1626Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-47350635-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350635
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350635
    reference: chr 11
allele count: 127
allele frequency: 1.04602510460251e-3
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4701G>T
  hgvsp: ENST00000342922.4:c.4701G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4878G>T
  hgvsp: ENST00000311027.5:c.4878G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*62G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4572G>T
  hgvsp: ENST00000402799.1:c.4572G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4560G>T
  hgvsp: ENST00000395344.3:c.4560G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4632G>T
  hgvsp: ENST00000407859.3:c.4632G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*62G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4698G>T
  hgvsp: ENST00000402192.2:c.4698G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4761G>T
  hgvsp: ENST00000349238.3:c.4761G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.602G>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser1626Ser
num of homozygotes: 2
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

11-47350638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350638
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350638
    reference: chr 11
allele count: 11
allele frequency: 9.060059961124106e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4635C>T
  hgvsp: ENST00000407859.3:c.4635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4563C>T
  hgvsp: ENST00000395344.3:c.4563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4575C>T
  hgvsp: ENST00000402799.1:c.4575C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4764C>T
  hgvsp: ENST00000349238.3:c.4764C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4701C>T
  hgvsp: ENST00000402192.2:c.4701C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4881C>T
  hgvsp: ENST00000311027.5:c.4881C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.605C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*65C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*65C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4704C>T
  hgvsp: ENST00000342922.4:c.4704C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr1627Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

11-47350639-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350639
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350639
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4765G>A
  hgvsp: ENSP00000304505.6:p.Val1589Met
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*66G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4576G>A
  hgvsp: ENSP00000385585.1:p.Val1526Met
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4564G>A
  hgvsp: ENSP00000378753.3:p.Val1522Met
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*66G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4702G>A
  hgvsp: ENSP00000384287.2:p.Val1568Met
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4705G>A
  hgvsp: ENSP00000343902.4:p.Val1569Met
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4882G>A
  hgvsp: ENSP00000310933.4:p.Val1628Met
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.606G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4636G>A
  hgvsp: ENSP00000384204.3:p.Val1546Met
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val1628Met
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

11-47350652-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350652
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350652
    reference: chr 11
allele count: 10
allele frequency: 8.236689509752241e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4718A>T
  hgvsp: ENSP00000343902.4:p.His1573Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4778A>T
  hgvsp: ENSP00000304505.6:p.His1593Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4577A>T
  hgvsp: ENSP00000378753.3:p.His1526Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4649A>T
  hgvsp: ENSP00000384204.3:p.His1550Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*79A>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4715A>T
  hgvsp: ENSP00000384287.2:p.His1572Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*79A>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.619A>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4895A>T
  hgvsp: ENSP00000310933.4:p.His1632Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4589A>T
  hgvsp: ENSP00000385585.1:p.His1530Leu
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6999
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His1632Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

11-47350658-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350658
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350658
    reference: chr 11
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.625G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*85G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4595G>C
  hgvsp: ENSP00000385585.1:p.Ser1532Thr
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4724G>C
  hgvsp: ENSP00000343902.4:p.Ser1575Thr
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4901G>C
  hgvsp: ENSP00000310933.4:p.Ser1634Thr
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4583G>C
  hgvsp: ENSP00000378753.3:p.Ser1528Thr
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4784G>C
  hgvsp: ENSP00000304505.6:p.Ser1595Thr
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*85G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4655G>C
  hgvsp: ENSP00000384204.3:p.Ser1552Thr
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4721G>C
  hgvsp: ENSP00000384287.2:p.Ser1574Thr
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser1634Thr
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

11-47350671-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350671
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350669
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4799_4800delGA
  hgvsp: ENSP00000304505.6:p.Arg1600AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.640_641delGA
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*100_*101delGA
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4670_4671delGA
  hgvsp: ENSP00000384204.3:p.Arg1557AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*100_*101delGA
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4736_4737delGA
  hgvsp: ENSP00000384287.2:p.Arg1579AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4610_4611delGA
  hgvsp: ENSP00000385585.1:p.Arg1537AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4739_4740delGA
  hgvsp: ENSP00000343902.4:p.Arg1580AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4916_4917delGA
  hgvsp: ENSP00000310933.4:p.Arg1639AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4598_4599delGA
  hgvsp: ENSP00000378753.3:p.Arg1533AsnfsTer8
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg1639AsnfsTer8
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: CAG
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-47350675-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350675
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350675
    reference: chr 11
allele count: 4
allele frequency: 3.295870274545994e-5
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4741A>C
  hgvsp: ENSP00000343902.4:p.Thr1581Pro
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4738A>C
  hgvsp: ENSP00000384287.2:p.Thr1580Pro
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*102A>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4600A>C
  hgvsp: ENSP00000378753.3:p.Thr1534Pro
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4612A>C
  hgvsp: ENSP00000385585.1:p.Thr1538Pro
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4918A>C
  hgvsp: ENSP00000310933.4:p.Thr1640Pro
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*102A>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4801A>C
  hgvsp: ENSP00000304505.6:p.Thr1601Pro
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.642A>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4672A>C
  hgvsp: ENSP00000384204.3:p.Thr1558Pro
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr1640Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-47350675-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350675
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350675
    reference: chr 11
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4600A>G
  hgvsp: ENSP00000378753.3:p.Thr1534Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*102A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4738A>G
  hgvsp: ENSP00000384287.2:p.Thr1580Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4672A>G
  hgvsp: ENSP00000384204.3:p.Thr1558Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.642A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*102A>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4741A>G
  hgvsp: ENSP00000343902.4:p.Thr1581Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4918A>G
  hgvsp: ENSP00000310933.4:p.Thr1640Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4801A>G
  hgvsp: ENSP00000304505.6:p.Thr1601Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4612A>G
  hgvsp: ENSP00000385585.1:p.Thr1538Ala
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr1640Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

11-47350678-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350678
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350678
    reference: chr 11
allele count: 3
allele frequency: 2.471251112063001e-5
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4675C>G
  hgvsp: ENSP00000384204.3:p.Pro1559Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4741C>G
  hgvsp: ENSP00000384287.2:p.Pro1581Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4744C>G
  hgvsp: ENSP00000343902.4:p.Pro1582Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*105C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*105C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4603C>G
  hgvsp: ENSP00000378753.3:p.Pro1535Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4615C>G
  hgvsp: ENSP00000385585.1:p.Pro1539Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4804C>G
  hgvsp: ENSP00000304505.6:p.Pro1602Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4921C>G
  hgvsp: ENSP00000310933.4:p.Pro1641Ala
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.645C>G
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro1641Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

11-47350679-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350679
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350679
    reference: chr 11
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*106C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4745C>T
  hgvsp: ENSP00000343902.4:p.Pro1582Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*106C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.646C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4805C>T
  hgvsp: ENSP00000304505.6:p.Pro1602Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4604C>T
  hgvsp: ENSP00000378753.3:p.Pro1535Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4616C>T
  hgvsp: ENSP00000385585.1:p.Pro1539Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4922C>T
  hgvsp: ENSP00000310933.4:p.Pro1641Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4742C>T
  hgvsp: ENSP00000384287.2:p.Pro1581Leu
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4676C>T
  hgvsp: ENSP00000384204.3:p.Pro1559Leu
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro1641Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

11-47350680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350680
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350680
    reference: chr 11
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4605G>A
  hgvsp: ENST00000395344.3:c.4605G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*107G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4923G>A
  hgvsp: ENST00000311027.5:c.4923G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4746G>A
  hgvsp: ENST00000342922.4:c.4746G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4806G>A
  hgvsp: ENST00000349238.3:c.4806G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.647G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*107G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4617G>A
  hgvsp: ENST00000402799.1:c.4617G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4743G>A
  hgvsp: ENST00000402192.2:c.4743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4677G>A
  hgvsp: ENST00000407859.3:c.4677G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro1641Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-47350681-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350681
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350681
    reference: chr 11
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4618C>T
  hgvsp: ENSP00000385585.1:p.Pro1540Ser
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4606C>T
  hgvsp: ENSP00000378753.3:p.Pro1536Ser
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4807C>T
  hgvsp: ENSP00000304505.6:p.Pro1603Ser
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4744C>T
  hgvsp: ENSP00000384287.2:p.Pro1582Ser
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4924C>T
  hgvsp: ENSP00000310933.4:p.Pro1642Ser
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*108C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4678C>T
  hgvsp: ENSP00000384204.3:p.Pro1560Ser
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.648C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4747C>T
  hgvsp: ENSP00000343902.4:p.Pro1583Ser
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro1642Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

11-47350684-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350684
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350684
    reference: chr 11
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4750C>T
  hgvsp: ENSP00000343902.4:p.Arg1584Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4810C>T
  hgvsp: ENSP00000304505.6:p.Arg1604Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4621C>T
  hgvsp: ENSP00000385585.1:p.Arg1541Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4927C>T
  hgvsp: ENSP00000310933.4:p.Arg1643Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.651C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4609C>T
  hgvsp: ENSP00000378753.3:p.Arg1537Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4681C>T
  hgvsp: ENSP00000384204.3:p.Arg1561Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4747C>T
  hgvsp: ENSP00000384287.2:p.Arg1583Trp
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*111C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*111C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg1643Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

11-47350685-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350685
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350685
    reference: chr 11
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4751G>A
  hgvsp: ENSP00000343902.4:p.Arg1584Gln
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4928G>A
  hgvsp: ENSP00000310933.4:p.Arg1643Gln
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4748G>A
  hgvsp: ENSP00000384287.2:p.Arg1583Gln
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*112G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*112G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4682G>A
  hgvsp: ENSP00000384204.3:p.Arg1561Gln
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4811G>A
  hgvsp: ENSP00000304505.6:p.Arg1604Gln
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.652G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4610G>A
  hgvsp: ENSP00000378753.3:p.Arg1537Gln
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4622G>A
  hgvsp: ENSP00000385585.1:p.Arg1541Gln
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg1643Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

11-47350690-GTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350690
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350688
    reference: chr 11
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.661_662delCT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4619_4620delCT
  hgvsp: ENSP00000378753.3:p.Ser1540Ter
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4937_4938delCT
  hgvsp: ENSP00000310933.4:p.Ser1646Ter
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*121_*122delCT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4760_4761delCT
  hgvsp: ENSP00000343902.4:p.Ser1587Ter
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4691_4692delCT
  hgvsp: ENSP00000384204.3:p.Ser1564Ter
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4631_4632delCT
  hgvsp: ENSP00000385585.1:p.Ser1544Ter
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4757_4758delCT
  hgvsp: ENSP00000384287.2:p.Ser1586Ter
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*121_*122delCT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4820_4821delCT
  hgvsp: ENSP00000304505.6:p.Ser1607Ter
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser1646Ter
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: GTC
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

11-47350692-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350692
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350692
    reference: chr 11
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4935C>G
  hgvsp: ENST00000311027.5:c.4935C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4629C>G
  hgvsp: ENST00000402799.1:c.4629C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*119C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4818C>G
  hgvsp: ENST00000349238.3:c.4818C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4758C>G
  hgvsp: ENST00000342922.4:c.4758C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4755C>G
  hgvsp: ENST00000402192.2:c.4755C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*119C>G
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4617C>G
  hgvsp: ENST00000395344.3:c.4617C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4689C>G
  hgvsp: ENST00000407859.3:c.4689C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.659C>G
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7020
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val1645Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

11-47350694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350694
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350694
    reference: chr 11
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4631C>T
  hgvsp: ENSP00000385585.1:p.Ser1544Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*121C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4760C>T
  hgvsp: ENSP00000343902.4:p.Ser1587Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.661C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4937C>T
  hgvsp: ENSP00000310933.4:p.Ser1646Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4619C>T
  hgvsp: ENSP00000378753.3:p.Ser1540Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4820C>T
  hgvsp: ENSP00000304505.6:p.Ser1607Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4691C>T
  hgvsp: ENSP00000384204.3:p.Ser1564Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4757C>T
  hgvsp: ENSP00000384287.2:p.Ser1586Phe
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*121C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3183
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser1646Phe
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

11-47350698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350698
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350698
    reference: chr 11
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.4764C>T
  hgvsp: ENST00000342922.4:c.4764C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.4623C>T
  hgvsp: ENST00000395344.3:c.4623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.4761C>T
  hgvsp: ENST00000402192.2:c.4761C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.4824C>T
  hgvsp: ENST00000349238.3:c.4824C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.665C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.4941C>T
  hgvsp: ENST00000311027.5:c.4941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.4635C>T
  hgvsp: ENST00000402799.1:c.4635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*125C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.4695C>T
  hgvsp: ENST00000407859.3:c.4695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*125C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser1647Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

11-47350715-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350715
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350715
    reference: chr 11
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*142C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*14C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.682C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*142C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD

11-47350716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350716
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350716
    reference: chr 11
allele count: 4
allele frequency: 3.297391763115376e-5
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*143G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.683G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*15G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*143G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-47350716-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350716
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350716
    reference: chr 11
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*143G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.683G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*143G>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*15G>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3605
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

11-47350720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350720
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350720
    reference: chr 11
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*147C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.687C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*147C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*19C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

11-47350733-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350733
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350733
    reference: chr 11
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.700G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*160G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*160G>C
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*32G>C
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

11-47350738-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350738
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350738
    reference: chr 11
allele count: 13
allele frequency: 1.072890532153704e-4
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*165C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*165C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.705C>T
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*37C>T
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35980
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-47350739-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350739
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350739
    reference: chr 11
allele count: 3
allele frequency: 2.47639173215347e-5
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*166G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*166G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.706G>A
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*38G>A
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5087
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

11-47350743-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47350743
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47350742
    reference: chr 11
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000310933
  ensembl transcript: ENST00000311027
  gene symbol: MADD
  hgvsc: ENST00000311027.5:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378745
  ensembl transcript: ENST00000395336
  gene symbol: MADD
  hgvsc: ENST00000395336.3:c.*171delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000385585
  ensembl transcript: ENST00000402799
  gene symbol: MADD
  hgvsc: ENST00000402799.1:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384204
  ensembl transcript: ENST00000407859
  gene symbol: MADD
  hgvsc: ENST00000407859.3:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384435
  ensembl transcript: ENST00000406482
  gene symbol: MADD
  hgvsc: ENST00000406482.1:c.*171delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000304505
  ensembl transcript: ENST00000349238
  gene symbol: MADD
  hgvsc: ENST00000349238.3:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000384287
  ensembl transcript: ENST00000402192
  gene symbol: MADD
  hgvsc: ENST00000402192.2:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000378753
  ensembl transcript: ENST00000395344
  gene symbol: MADD
  hgvsc: ENST00000395344.3:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110514
  ensembl protein: ENSP00000343902
  ensembl transcript: ENST00000342922
  gene symbol: MADD
  hgvsc: ENST00000342922.4:c.*43delT
  variant of: http://identifiers.org/hgnc/6766
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110514
  ensembl transcript: ENST00000469699
  gene symbol: MADD
  hgvsc: ENST00000469699.1:n.711delT
  variant of: http://identifiers.org/hgnc/6766
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3393
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: CT
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

11-47353373-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353373
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353373
    reference: chr 11
allele count: 2
allele frequency: 2.439917042820544e-5
allele num: 81970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+23G>C
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+23G>C
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+23G>C
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18795
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3406
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5581
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5386
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3794
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13525
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7432
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-47353374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353374
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353374
    reference: chr 11
allele count: 2
allele frequency: 2.438548575887632e-5
allele num: 82016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+22G>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+22G>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+22G>A
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18791
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5380
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13950
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3663
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5568
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

11-47353380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353380
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353380
    reference: chr 11
allele count: 1
allele frequency: 1.212091828076895e-5
allele num: 82502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+16C>T
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+16C>T
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+16C>T
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18754
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5413
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5409
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

11-47353380-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353380
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353380
    reference: chr 11
allele count: 33
allele frequency: 3.999903032653754e-4
allele num: 82502
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+16C>G
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+16C>G
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+16C>G
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15996
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 18754
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5409
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5413
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5756
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 9.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-47353382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353382
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353382
    reference: chr 11
allele count: 6
allele frequency: 7.285974499089253e-5
allele num: 82350
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+14G>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+14G>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+14G>A
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15972
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18678
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5401
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

11-47353383-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353383
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353383
    reference: chr 11
allele count: 3
allele frequency: 3.639275056408763e-5
allele num: 82434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+13C>T
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+13C>T
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+13C>T
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5063
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7164
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

11-47353383-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353383
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353383
    reference: chr 11
allele count: 3
allele frequency: 3.639275056408763e-5
allele num: 82434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+13C>G
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+13C>G
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+13C>G
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18451
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5063
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7164
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

11-47353383-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353383
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353383
    reference: chr 11
allele count: 2
allele frequency: 2.426183370939176e-5
allele num: 82434
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+13C>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+13C>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+13C>A
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18451
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16518
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 399
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

11-47353387-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353387
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353387
    reference: chr 11
allele count: 2
allele frequency: 2.397966524387319e-5
allele num: 83404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+9C>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+9C>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+9C>A
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17749
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6902
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 5280
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9575
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4523
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

11-47353388-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353388
    reference: chr 11
allele count: 1
allele frequency: 1.196945395351064e-5
allele num: 83546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*26+8C>T
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*26+8C>T
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*26+8C>T
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10274
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 929
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genotype quality: GenotypeQuality
  all individuals: 5278
  bin: 2.75e1
  variant carriers: 0
hgvs: c.*26+8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

11-47353398-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47353398
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 47353398
    reference: chr 11
allele count: 2
allele frequency: 2.349734480003759e-5
allele num: 85116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000382193
  ensembl transcript: ENST00000399249
  gene symbol: MYBPC3
  hgvsc: ENST00000399249.2:c.*24C>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000442795
  ensembl transcript: ENST00000545968
  gene symbol: MYBPC3
  hgvsc: ENST00000545968.1:c.*24C>A
  variant of: http://identifiers.org/hgnc/7551
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134571
  ensembl protein: ENSP00000256993
  ensembl transcript: ENST00000256993
  gene symbol: MYBPC3
  hgvsc: ENST00000256993.4:c.*24C>A
  variant of: http://identifiers.org/hgnc/7551
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5644
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17658
  bin: 2.25e1
  variant carriers: 0
hgvs: c.*24C>A
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 7512
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8341
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32386
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2288
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.429e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

DP
type: SiteQuality
SIO_000300: 1.806e6

MQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 9.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e0

GenotypeQuality
all individuals: 547
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8340
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7219
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017046311660884e-5
allele num: 66290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 9.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.24e-1

FS
type: SiteQuality
SIO_000300: 2.27e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
type: SiteQuality
SIO_000300: 1.781815e6

GenotypeQuality
all individuals: 596
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1576
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8337
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3025
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509433962264151e-5
allele num: 66250
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1969e1

DP
type: SiteQuality
SIO_000300: 1.779701e6

VQSLOD
type: SiteQuality
SIO_000300: -6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.183e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.716e0

MQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

GenotypeQuality
all individuals: 487
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7162
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8338
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 519
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.568e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.84e-2

FS
type: SiteQuality
SIO_000300: 4.564e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.375e1

DP
type: SiteQuality
SIO_000300: 1.778292e6

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-3

GenotypeQuality
all individuals: 25547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8342
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1039
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509206157561123e-5
allele num: 66260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.765771e6

VQSLOD
type: SiteQuality
SIO_000300: -1.557e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.778e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.513e0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24100
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6879
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.416261439487753e-4
allele num: 66218
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.118453255017132e-5
allele num: 16344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e-1

QD
type: SiteQuality
SIO_000300: 1.583e1

DP
type: SiteQuality
SIO_000300: 1.759019e6

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8493
bin: 9.75e1
variant carriers: 214

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6148
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.942879347192539e-4
allele num: 10294
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.048951048951049e-3
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513454611496201e-5
allele num: 66074
num of homozygotes: 0

South Asian
type: Population
allele count: 207
allele frequency: 1.267916207276736e-2
allele num: 16326
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.36e1

DP
type: SiteQuality
SIO_000300: 1.748822e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 3243
bin: 6.75e1
variant carriers: 564

GenotypeQuality
all individuals: 1661
bin: 3.75e1
variant carriers: 189

GenotypeQuality
all individuals: 616
bin: 8.75e1
variant carriers: 269

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 486

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 53

GenotypeQuality
all individuals: 161
bin: 1.25e1
variant carriers: 67

GenotypeQuality
all individuals: 860
bin: 4.25e1
variant carriers: 181

GenotypeQuality
all individuals: 784
bin: 5.75e1
variant carriers: 268

GenotypeQuality
all individuals: 1008
bin: 4.75e1
variant carriers: 293

GenotypeQuality
all individuals: 1866
bin: 2.25e1
variant carriers: 91

GenotypeQuality
all individuals: 175
bin: 1.75e1
variant carriers: 54

GenotypeQuality
all individuals: 1336
bin: 8.25e1
variant carriers: 524

GenotypeQuality
all individuals: 1287
bin: 7.25e1
variant carriers: 312

GenotypeQuality
all individuals: 10280
bin: 6.25e1
variant carriers: 509

GenotypeQuality
all individuals: 30291
bin: 9.75e1
variant carriers: 27485

GenotypeQuality
all individuals: 1910
bin: 3.25e1
variant carriers: 131

African
type: Population
allele count: 4707
allele frequency: 4.601173020527859e-1
allele num: 10230
num of homozygotes: 1084

European (Non-Finnish)
type: Population
allele count: 16033
allele frequency: 2.443012128969342e-1
allele num: 65628
num of homozygotes: 1972

European (Finnish)
type: Population
allele count: 2213
allele frequency: 3.422517785338695e-1
allele num: 6466
num of homozygotes: 368

Latino
type: Population
allele count: 5004
allele frequency: 4.468655116985176e-1
allele num: 11198
num of homozygotes: 1130

South Asian
type: Population
allele count: 5914
allele frequency: 3.621999020088192e-1
allele num: 16328
num of homozygotes: 1084

East Asian
type: Population
allele count: 5502
allele frequency: 6.471418489767113e-1
allele num: 8502
num of homozygotes: 1735

Other
type: Population
allele count: 241
allele frequency: 2.701793721973094e-1
allele num: 892
num of homozygotes: 36

VQSLOD
type: SiteQuality
SIO_000300: 5.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.58e-2

DP
type: SiteQuality
SIO_000300: 1.902397e6

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

QD
type: SiteQuality
SIO_000300: 1.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

GenotypeQuality
all individuals: 6716
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1095
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 4587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
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variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18949
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5698
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.154603643525357e-5
allele num: 16248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.568991775814804e-5
allele num: 65660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

FS
type: SiteQuality
SIO_000300: 2.047e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.151e1

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.646178e6

GenotypeQuality
all individuals: 1166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19473
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4067
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 774
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variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.233806292412091e-4
allele num: 16210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.093e0

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

DP
type: SiteQuality
SIO_000300: 1.645197e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.98e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.925e0

GenotypeQuality
all individuals: 239
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
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variant carriers: 0

GenotypeQuality
all individuals: 5251
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 1161
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1781
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variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4822
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65376
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.928571428571429e-5
allele num: 11200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

FS
type: SiteQuality
SIO_000300: 2.372e0

QD
type: SiteQuality
SIO_000300: 3.097e1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

DP
type: SiteQuality
SIO_000300: 1.608405e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -1.738e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.589e0

GenotypeQuality
all individuals: 773
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
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variant carriers: 0

GenotypeQuality
all individuals: 183
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variant carriers: 0

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 366
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 4362
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variant carriers: 0

GenotypeQuality
all individuals: 1159
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GenotypeQuality
all individuals: 2849
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variant carriers: 0

GenotypeQuality
all individuals: 235
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variant carriers: 0

GenotypeQuality
all individuals: 4779
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variant carriers: 0

GenotypeQuality
all individuals: 5305
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variant carriers: 0

GenotypeQuality
all individuals: 2270
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GenotypeQuality
all individuals: 3034
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variant carriers: 0

GenotypeQuality
all individuals: 6706
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variant carriers: 1

GenotypeQuality
all individuals: 1763
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530409231428484e-5
allele num: 65342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 4.179e0

QD
type: SiteQuality
SIO_000300: 1.219e1

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.951e0

DP
type: SiteQuality
SIO_000300: 1.607863e6

GenotypeQuality
all individuals: 6707
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3763
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GenotypeQuality
all individuals: 3337
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6007
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GenotypeQuality
all individuals: 7917
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variant carriers: 0

GenotypeQuality
all individuals: 5696
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GenotypeQuality
all individuals: 780
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variant carriers: 0

GenotypeQuality
all individuals: 5486
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 298
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GenotypeQuality
all individuals: 1156
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GenotypeQuality
all individuals: 2187
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variant carriers: 0

GenotypeQuality
all individuals: 2879
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variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546312045770837e-5
allele num: 64670
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

QD
type: SiteQuality
SIO_000300: 1.645e1

DP
type: SiteQuality
SIO_000300: 1.587726e6

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
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variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 1899
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variant carriers: 0

GenotypeQuality
all individuals: 165
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GenotypeQuality
all individuals: 2193
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 1221
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GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 127
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GenotypeQuality
all individuals: 2092
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variant carriers: 0

GenotypeQuality
all individuals: 45918
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.28e1

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.42157e6

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.943e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 9

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 12

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 1433
bin: 9.25e1
variant carriers: 166

GenotypeQuality
all individuals: 1390
bin: 6.75e1
variant carriers: 115

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 27

GenotypeQuality
all individuals: 871
bin: 8.75e1
variant carriers: 113

GenotypeQuality
all individuals: 1302
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variant carriers: 114

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 56

GenotypeQuality
all individuals: 55
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variant carriers: 7

GenotypeQuality
all individuals: 99
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variant carriers: 15

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 816
bin: 7.25e1
variant carriers: 81

GenotypeQuality
all individuals: 2427
bin: 6.25e1
variant carriers: 91

GenotypeQuality
all individuals: 50269
bin: 9.75e1
variant carriers: 36976

GenotypeQuality
all individuals: 1396
bin: 8.25e1
variant carriers: 144

South Asian
type: Population
allele count: 7654
allele frequency: 4.645545035202719e-1
allele num: 16476
num of homozygotes: 1818

European (Finnish)
type: Population
allele count: 2824
allele frequency: 4.274901604601877e-1
allele num: 6606
num of homozygotes: 598

African
type: Population
allele count: 6185
allele frequency: 5.949403616775683e-1
allele num: 10396
num of homozygotes: 1835

European (Non-Finnish)
type: Population
allele count: 20593
allele frequency: 3.092042042042042e-1
allele num: 66600
num of homozygotes: 3204

Other
type: Population
allele count: 284
allele frequency: 3.127753303964758e-1
allele num: 908
num of homozygotes: 48

Latino
type: Population
allele count: 5250
allele frequency: 4.543094496365525e-1
allele num: 11556
num of homozygotes: 1264

East Asian
type: Population
allele count: 6060
allele frequency: 7.022016222479722e-1
allele num: 8630
num of homozygotes: 2112

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 3.674091e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.240000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

QD
type: SiteQuality
SIO_000300: 2.175e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
all individuals: 871
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50269
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variant carriers: 8

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2427
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.507507507507507e-5
allele num: 66600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.541326067211626e-4
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.240000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.175e1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

DP
type: SiteQuality
SIO_000300: 3.674091e6

GenotypeQuality
all individuals: 36123
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.367e0

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

QD
type: SiteQuality
SIO_000300: 9.2e-1

FS
type: SiteQuality
SIO_000300: 8.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.418e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.842968e6

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3426
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.805e0

MQRankSum
type: SiteQuality
SIO_000300: 9.99e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.798e-1

QD
type: SiteQuality
SIO_000300: 1.1e1

DP
type: SiteQuality
SIO_000300: 2.843715e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.876e0

GenotypeQuality
all individuals: 3289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36120
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

DP
type: SiteQuality
SIO_000300: 2.844667e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

QD
type: SiteQuality
SIO_000300: 1.441e1

FS
type: SiteQuality
SIO_000300: 8.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3187
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36120
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

DP
type: SiteQuality
SIO_000300: 2.845374e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.002e0

FS
type: SiteQuality
SIO_000300: 4.149e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.04e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3194
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36119
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.845534e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.31e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 8.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.447e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

GenotypeQuality
all individuals: 3645
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6807
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36117
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.276e1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

DP
type: SiteQuality
SIO_000300: 2.846879e6

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

FS
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.939e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
all individuals: 3426
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36117
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

DP
type: SiteQuality
SIO_000300: 2.846911e6

QD
type: SiteQuality
SIO_000300: 1.485e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

FS
type: SiteQuality
SIO_000300: 3.005e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 9
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.496701451361401e-5
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.847534e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

FS
type: SiteQuality
SIO_000300: 2.359e0

QD
type: SiteQuality
SIO_000300: 1.524e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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DP
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BaseQRankSum
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SIO_000300: -2.578e0

VQSLOD
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SIO_000300: 3.55e0

QD
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SIO_000300: 1.247e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 44
allele frequency: 4.228329809725159e-3
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: 9.9e-2

FS
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 2.48e-1

BaseQRankSum
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SIO_000300: -4.572e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997961386257345e-5
allele num: 66712
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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BaseQRankSum
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SIO_000300: -1.493e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.855e0

MQRankSum
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SIO_000300: -2.377e0

MQ
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DP
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BaseQRankSum
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SIO_000300: 3.32e-1

ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
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SIO_000300: -1.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

South Asian
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MQ
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DP
type: SiteQuality
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele count: 0
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allele num: 6614
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East Asian
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allele frequency: 9.244280101687081e-4
allele num: 8654
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele num: 16512
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ClippingRankSum
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FS
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MQ
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele num: 6614
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
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FS
type: SiteQuality
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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ReadPosRankSum
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.846178e6

QD
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36150
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.122819139747797e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.858954e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.22e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 36150
bin: 9.75e1
variant carriers: 125

GenotypeQuality
all individuals: 6964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3186
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3278
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.846868444710818e-4
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 95
allele frequency: 5.753391472868217e-3
allele num: 16512
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.506607929515419e-3
allele num: 908
num of homozygotes: 1

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 2.858954e6

QD
type: SiteQuality
SIO_000300: 1.22e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.22e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.38e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

GenotypeQuality
all individuals: 36053
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7001
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3289
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498351813005694e-4
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

DP
type: SiteQuality
SIO_000300: 2.846316e6

QD
type: SiteQuality
SIO_000300: 1.255e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36047
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7001
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 2.845104e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.132e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

FS
type: SiteQuality
SIO_000300: 3.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36046
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.611687812379854e-4
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.352e1

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

DP
type: SiteQuality
SIO_000300: 2.845584e6

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3194
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7001
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 2.844441e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36039
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3292
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

QD
type: SiteQuality
SIO_000300: 1.51e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 4.627e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

DP
type: SiteQuality
SIO_000300: 2.844131e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35999
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6963
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3661
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.550970873786408e-4
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

Other
type: Population
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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ClippingRankSum
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FS
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QD
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MQ
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SIO_000300: 5.966e1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66730
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African
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allele num: 10400
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Latino
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DP
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FS
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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allele num: 11578
num of homozygotes: 0

South Asian
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African
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Other
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European (Finnish)
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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FS
type: SiteQuality
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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SIO_000300: 1.78e-1

BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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South Asian
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Other
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MQ
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SIO_000300: 5.957e1

FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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East Asian
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VQSLOD
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ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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QD
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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Latino
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Other
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South Asian
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InbreedingCoeff
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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QD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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SIO_000300: -8.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.31e-1

MQ
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SIO_000300: 6.062e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.48e0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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QD
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ReadPosRankSum
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SIO_000300: -1.108e0

InbreedingCoeff
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SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 9.82e-1

BaseQRankSum
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SIO_000300: -2.409e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

BaseQRankSum
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DP
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FS
type: SiteQuality
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MQ
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QD
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -9.95e-1

VQSLOD
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SIO_000300: -7.829e-1

InbreedingCoeff
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SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.359e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.399e0

QD
type: SiteQuality
SIO_000300: 1.688e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.840981e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.159e0

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

DP
type: SiteQuality
SIO_000300: 2.836603e6

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 9.4e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 2.886836027713626e-4
allele num: 10392
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.23e-1

BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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East Asian
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InbreedingCoeff
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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FS
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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African
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Other
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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VQSLOD
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FS
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3147
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

DP
type: SiteQuality
SIO_000300: 2.825392e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.689e0

GenotypeQuality
all individuals: 306
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
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GenotypeQuality
all individuals: 1893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
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GenotypeQuality
all individuals: 3298
bin: 6.75e1
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GenotypeQuality
all individuals: 3398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 5.25e1
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GenotypeQuality
all individuals: 5446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.009550123130518e-5
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.430724355858046e-4
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.817971e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.384e1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.141e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

GenotypeQuality
all individuals: 491
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
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GenotypeQuality
all individuals: 311
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 1873
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GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 2028
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35969
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.301e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.155e0

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.36e1

DP
type: SiteQuality
SIO_000300: 2.813984e6

GenotypeQuality
all individuals: 299
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
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variant carriers: 0

GenotypeQuality
all individuals: 429
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GenotypeQuality
all individuals: 35967
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 130
bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 233
bin: 2.75e1
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GenotypeQuality
all individuals: 2023
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variant carriers: 0

GenotypeQuality
all individuals: 3235
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variant carriers: 0

GenotypeQuality
all individuals: 5097
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.417e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.425e0

FS
type: SiteQuality
SIO_000300: 4.075e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

DP
type: SiteQuality
SIO_000300: 2.810116e6

QD
type: SiteQuality
SIO_000300: 1.746e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2326
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.192982456140351e-5
allele num: 45600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.377790024800221e-4
allele num: 7258
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.018475e6

VQSLOD
type: SiteQuality
SIO_000300: -7.897999999999999e-1

QD
type: SiteQuality
SIO_000300: 5.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeQuality
all individuals: 390
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.379434177104318e-5
allele num: 45668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 5.747e0

QD
type: SiteQuality
SIO_000300: 1.467e1

VQSLOD
type: SiteQuality
SIO_000300: 8.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.020122e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

GenotypeQuality
all individuals: 1301
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.17732102421181e-5
allele num: 45928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 2.339e0

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

DP
type: SiteQuality
SIO_000300: 1.034676e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

GenotypeQuality
all individuals: 7341
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3486
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 4.096122337520481e-4
allele num: 7324
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.76678445229682e-3
allele num: 566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 6.314230970214248e-4
allele num: 45928
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.339e0

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

DP
type: SiteQuality
SIO_000300: 1.034676e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 639
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7318
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.578053955744165e-4
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.182357819388067e-5
allele num: 45822
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 2.768e0

MQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

DP
type: SiteQuality
SIO_000300: 1.04236e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

QD
type: SiteQuality
SIO_000300: 1.24e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
all individuals: 4404
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3502
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 12374
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.53765690376569e-5
allele num: 45888
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 7.669e0

QD
type: SiteQuality
SIO_000300: 1.116e1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.84e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

DP
type: SiteQuality
SIO_000300: 1.050392e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

GenotypeQuality
all individuals: 1393
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3502
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 8.081461128171973e-5
allele num: 12374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7320
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.027550711474417e-4
allele num: 6606
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.84e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.050392e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

GenotypeQuality
all individuals: 5063
bin: 3.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.179218967921897e-5
allele num: 45888
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12374
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.618646811265782e-4
allele num: 6178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

FS
type: SiteQuality
SIO_000300: 7.669e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 1.050392e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.84e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 972
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.150537634408602e-5
allele num: 46500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7390
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.590836780146357e-4
allele num: 6286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.5e0

VQSLOD
type: SiteQuality
SIO_000300: -2.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.226e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.479e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

DP
type: SiteQuality
SIO_000300: 1.070115e6

GenotypeQuality
all individuals: 1311
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.148689299527288e-5
allele num: 46540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.839e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.875e0

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 1.073225e6

QD
type: SiteQuality
SIO_000300: 1.215e1