16-309521-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309521
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309521
    reference: chr 16
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.308A>G
  hgvsp: ENSP00000397477.2:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.308A>G
  hgvsp: ENSP00000411394.2:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.308A>G
  hgvsp: ENSP00000398433.1:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.308A>G
  hgvsp: ENSP00000407669.1:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.308A>G
  hgvsp: ENSP00000399150.1:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.308A>G
  hgvsp: ENSP00000471331.1:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.308A>G
  hgvsp: ENSP00000402119.1:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.308A>G
  hgvsp: ENSP00000382814.3:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.308A>G
  hgvsp: ENSP00000301679.2:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.308A>G
  hgvsp: ENSP00000301678.3:p.Asp103Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.94A>G
  hgvsp: ENSP00000412581.1:p.Asp32Gly
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-447A>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48689
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp103Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-309524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309524
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309524
    reference: chr 16
allele count: 455
allele frequency: 3.767866311134666e-3
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.97G>A
  hgvsp: ENSP00000412581.1:p.Arg33Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.311G>A
  hgvsp: ENSP00000397477.2:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.311G>A
  hgvsp: ENSP00000301678.3:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.311G>A
  hgvsp: ENSP00000471331.1:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.311G>A
  hgvsp: ENSP00000301679.2:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-444G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.311G>A
  hgvsp: ENSP00000411394.2:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.311G>A
  hgvsp: ENSP00000399150.1:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.311G>A
  hgvsp: ENSP00000382814.3:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.311G>A
  hgvsp: ENSP00000407669.1:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.311G>A
  hgvsp: ENSP00000398433.1:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.311G>A
  hgvsp: ENSP00000402119.1:p.Arg104Lys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Arg104Lys
num of homozygotes: 5
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-309525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309525
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309525
    reference: chr 16
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-443G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.312G>A
  hgvsp: ENST00000450082.2:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.312G>A
  hgvsp: ENST00000420046.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.312G>A
  hgvsp: ENST00000453430.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.312G>A
  hgvsp: ENST00000600536.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.98G>A
  hgvsp: ENST00000421000.1:c.98G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.312G>A
  hgvsp: ENST00000301679.2:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.312G>A
  hgvsp: ENST00000438220.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.312G>A
  hgvsp: ENST00000442458.2:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.312G>A
  hgvsp: ENST00000301678.3:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.312G>A
  hgvsp: ENST00000399932.3:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.312G>A
  hgvsp: ENST00000449945.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg104Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

16-309530-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309530
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309530
    reference: chr 16
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.317A>G
  hgvsp: ENSP00000402119.1:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.317A>G
  hgvsp: ENSP00000471331.1:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.317A>G
  hgvsp: ENSP00000397477.2:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.317A>G
  hgvsp: ENSP00000398433.1:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.317A>G
  hgvsp: ENSP00000407669.1:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.317A>G
  hgvsp: ENSP00000301678.3:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.317A>G
  hgvsp: ENSP00000301679.2:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.317A>G
  hgvsp: ENSP00000399150.1:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.317A>G
  hgvsp: ENSP00000411394.2:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.103A>G
  hgvsp: ENSP00000412581.1:p.Gln35Arg
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-438A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.317A>G
  hgvsp: ENSP00000382814.3:p.Gln106Arg
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48662
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln106Arg
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

16-309531-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309531
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309531
    reference: chr 16
allele count: 3
allele frequency: 2.484348603796085e-5
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.318A>T
  hgvsp: ENSP00000301678.3:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.318A>T
  hgvsp: ENSP00000382814.3:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.318A>T
  hgvsp: ENSP00000407669.1:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.318A>T
  hgvsp: ENSP00000398433.1:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.318A>T
  hgvsp: ENSP00000397477.2:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.318A>T
  hgvsp: ENSP00000411394.2:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.104A>T
  hgvsp: ENSP00000412581.1:p.Gln35His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.318A>T
  hgvsp: ENSP00000402119.1:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-437A>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.318A>T
  hgvsp: ENSP00000399150.1:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.318A>T
  hgvsp: ENSP00000471331.1:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.318A>T
  hgvsp: ENSP00000301679.2:p.Gln106His
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48661
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln106His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-309534-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309534
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309534
    reference: chr 16
allele count: 2
allele frequency: 1.656177542232527e-5
allele num: 120760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.321T>C
  hgvsp: ENST00000420046.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.321T>C
  hgvsp: ENST00000301678.3:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.321T>C
  hgvsp: ENST00000453430.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.321T>C
  hgvsp: ENST00000449945.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.107T>C
  hgvsp: ENST00000421000.1:c.107T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.321T>C
  hgvsp: ENST00000399932.3:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.321T>C
  hgvsp: ENST00000600536.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.321T>C
  hgvsp: ENST00000450082.2:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-434T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.321T>C
  hgvsp: ENST00000301679.2:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.321T>C
  hgvsp: ENST00000442458.2:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.321T>C
  hgvsp: ENST00000438220.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48661
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp107Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

16-309550-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309550
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309550
    reference: chr 16
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.337A>G
  hgvsp: ENSP00000407669.1:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.337A>G
  hgvsp: ENSP00000471331.1:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.337A>G
  hgvsp: ENSP00000301679.2:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.337A>G
  hgvsp: ENSP00000397477.2:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.337A>G
  hgvsp: ENSP00000411394.2:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.123A>G
  hgvsp: ENSP00000412581.1:p.Lys42Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.337A>G
  hgvsp: ENSP00000398433.1:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.337A>G
  hgvsp: ENSP00000402119.1:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.337A>G
  hgvsp: ENSP00000382814.3:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.337A>G
  hgvsp: ENSP00000301678.3:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.337A>G
  hgvsp: ENSP00000399150.1:p.Lys113Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-418A>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys113Glu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

16-309552-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309552
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309552
    reference: chr 16
allele count: 22
allele frequency: 1.821855642783795e-4
allele num: 120756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.125A>G
  hgvsp: ENST00000421000.1:c.125A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.339A>G
  hgvsp: ENST00000301678.3:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.339A>G
  hgvsp: ENST00000399932.3:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.339A>G
  hgvsp: ENST00000420046.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-416A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.339A>G
  hgvsp: ENST00000450082.2:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.339A>G
  hgvsp: ENST00000442458.2:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.339A>G
  hgvsp: ENST00000301679.2:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.339A>G
  hgvsp: ENST00000453430.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.339A>G
  hgvsp: ENST00000600536.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.339A>G
  hgvsp: ENST00000438220.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.339A>G
  hgvsp: ENST00000449945.1:c.339A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48662
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys113Lys
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

16-309580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309580
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309580
    reference: chr 16
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.367C>T
  hgvsp: ENSP00000402119.1:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.367C>T
  hgvsp: ENSP00000397477.2:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.367C>T
  hgvsp: ENSP00000407669.1:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.367C>T
  hgvsp: ENSP00000382814.3:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.367C>T
  hgvsp: ENSP00000399150.1:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.367C>T
  hgvsp: ENSP00000471331.1:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.367C>T
  hgvsp: ENSP00000398433.1:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.367C>T
  hgvsp: ENSP00000411394.2:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.367C>T
  hgvsp: ENSP00000301678.3:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-388C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.153C>T
  hgvsp: ENSP00000412581.1:p.Arg52Ter
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.367C>T
  hgvsp: ENSP00000301679.2:p.Arg123Ter
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg123Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-309581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309581
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309581
    reference: chr 16
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.368G>A
  hgvsp: ENSP00000411394.2:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.368G>A
  hgvsp: ENSP00000301678.3:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.368G>A
  hgvsp: ENSP00000301679.2:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.368G>A
  hgvsp: ENSP00000382814.3:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.368G>A
  hgvsp: ENSP00000398433.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.368G>A
  hgvsp: ENSP00000399150.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.368G>A
  hgvsp: ENSP00000402119.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.154G>A
  hgvsp: ENSP00000412581.1:p.Arg52Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.368G>A
  hgvsp: ENSP00000397477.2:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.368G>A
  hgvsp: ENSP00000471331.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.368G>A
  hgvsp: ENSP00000407669.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-387G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg123Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-309584-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309584
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309584
    reference: chr 16
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.371C>G
  hgvsp: ENSP00000301678.3:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.371C>G
  hgvsp: ENSP00000411394.2:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.371C>G
  hgvsp: ENSP00000407669.1:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.371C>G
  hgvsp: ENSP00000398433.1:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.371C>G
  hgvsp: ENSP00000397477.2:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.371C>G
  hgvsp: ENSP00000471331.1:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.371C>G
  hgvsp: ENSP00000402119.1:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.371C>G
  hgvsp: ENSP00000399150.1:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-384C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.371C>G
  hgvsp: ENSP00000301679.2:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.157C>G
  hgvsp: ENSP00000412581.1:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.371C>G
  hgvsp: ENSP00000382814.3:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser124Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

16-309592-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309592
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309592
    reference: chr 16
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.379G>A
  hgvsp: ENSP00000301678.3:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.379G>A
  hgvsp: ENSP00000402119.1:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.379G>A
  hgvsp: ENSP00000407669.1:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.379G>A
  hgvsp: ENSP00000382814.3:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.379G>A
  hgvsp: ENSP00000411394.2:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.165G>A
  hgvsp: ENSP00000412581.1:p.Asp56Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.379G>A
  hgvsp: ENSP00000399150.1:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.379G>A
  hgvsp: ENSP00000398433.1:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-376G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.379G>A
  hgvsp: ENSP00000397477.2:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.379G>A
  hgvsp: ENSP00000471331.1:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.379G>A
  hgvsp: ENSP00000301679.2:p.Asp127Asn
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp127Asn
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

16-309594-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309594
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309594
    reference: chr 16
allele count: 2
allele frequency: 1.658759911090469e-5
allele num: 120572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.381C>T
  hgvsp: ENST00000420046.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-374C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.381C>T
  hgvsp: ENST00000301679.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.167C>T
  hgvsp: ENST00000421000.1:c.167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.381C>T
  hgvsp: ENST00000438220.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.381C>T
  hgvsp: ENST00000600536.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.381C>T
  hgvsp: ENST00000442458.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.381C>T
  hgvsp: ENST00000301678.3:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.381C>T
  hgvsp: ENST00000453430.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.381C>T
  hgvsp: ENST00000449945.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.381C>T
  hgvsp: ENST00000399932.3:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.381C>T
  hgvsp: ENST00000450082.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp127Asp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

16-309595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309595
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309595
    reference: chr 16
allele count: 3
allele frequency: 2.488593944421402e-5
allele num: 120550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.382G>A
  hgvsp: ENSP00000397477.2:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.382G>A
  hgvsp: ENSP00000407669.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.382G>A
  hgvsp: ENSP00000399150.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.382G>A
  hgvsp: ENSP00000301678.3:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.168G>A
  hgvsp: ENSP00000412581.1:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.382G>A
  hgvsp: ENSP00000301679.2:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.382G>A
  hgvsp: ENSP00000398433.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.382G>A
  hgvsp: ENSP00000382814.3:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.382G>A
  hgvsp: ENSP00000471331.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.382G>A
  hgvsp: ENSP00000402119.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-373G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.382G>A
  hgvsp: ENSP00000411394.2:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu128Lys
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

16-309603-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309603
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309603
    reference: chr 16
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-365T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+5T>C
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.385+5T>C
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

16-309606-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309606
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309606
    reference: chr 16
allele count: 1
allele frequency: 8.30937463646486e-6
allele num: 120346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-362C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+8C>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.385+8C>G
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

16-309607-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309607
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309607
    reference: chr 16
allele count: 2
allele frequency: 1.662316937347275e-5
allele num: 120314
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-361A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+9A>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

16-309608-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309608
    reference: chr 16
allele count: 3
allele frequency: 2.493475406020912e-5
allele num: 120314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-360T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+10T>C
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

16-309611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309611
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309611
    reference: chr 16
allele count: 1
allele frequency: 8.314763694415805e-6
allele num: 120268
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-357T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+13T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+13T>C
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-309624-C-CGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309624
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309626
    reference: chr 16
allele count: 1
allele frequency: 8.335695113615524e-6
allele num: 119966
alternate allele: CGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-343_269-342dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+27_171+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+27_385+28dupGG
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

16-309624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309624
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309624
    reference: chr 16
allele count: 26
allele frequency: 2.167280729540036e-4
allele num: 119966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-344C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+26C>T
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

16-309625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309625
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309625
    reference: chr 16
allele count: 6
allele frequency: 5.000083334722246e-5
allele num: 119998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-343G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+27G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

16-309635-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309635
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309635
    reference: chr 16
allele count: 1
allele frequency: 8.347106058329577e-6
allele num: 119802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-333G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+37G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-309645-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309645
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309645
    reference: chr 16
allele count: 1
allele frequency: 8.366520531441385e-6
allele num: 119524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-323G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+47G>T
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

16-309647-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309647
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309647
    reference: chr 16
allele count: 1
allele frequency: 8.370442294170824e-6
allele num: 119468
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-321A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+49A>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-309649-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309649
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309649
    reference: chr 16
allele count: 1
allele frequency: 8.38799510141086e-6
allele num: 119218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-319C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+51C>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-309649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309649
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309649
    reference: chr 16
allele count: 7
allele frequency: 5.871596570987603e-5
allele num: 119218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-319C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+51C>T
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48658
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-309650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309650
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309650
    reference: chr 16
allele count: 1
allele frequency: 8.411136344520145e-6
allele num: 118890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-318G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.171+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.385+52G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

16-309920-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309920
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309920
    reference: chr 16
allele count: 5
allele frequency: 4.310716441072506e-5
allele num: 115990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-75G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-75G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-48G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11937
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-309931-T-TGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309931
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309933
    reference: chr 16
allele count: 2
allele frequency: 1.716797143249554e-5
allele num: 116496
alternate allele: TGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-36_172-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-63_386-62insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-36_386-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-36_269-35insAG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-63_386-62insAG
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15372
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum

16-309935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309935
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309935
    reference: chr 16
allele count: 1
allele frequency: 8.575593859874796e-6
allele num: 116610
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-60G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-60G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-33G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

16-309935-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309935
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309935
    reference: chr 16
allele count: 1
allele frequency: 8.575593859874796e-6
allele num: 116610
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-60G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-33G>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-60G>C
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-309936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309936
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309936
    reference: chr 16
allele count: 3
allele frequency: 2.574930476877124e-5
allele num: 116508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-59C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-32C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-59C>T
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15904
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

16-309940-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309940
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309940
    reference: chr 16
allele count: 1
allele frequency: 8.554612647139337e-6
allele num: 116896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-55A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-28A>G
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-55A>G
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

16-309943-GAGGTGCCGGTGTCTCTCCCTACAGGCTTTTCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309943
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309910
    reference: chr 16
allele count: 1
allele frequency: 8.548762139242238e-6
allele num: 116976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: GAGGTGCCGGTGTCTCTCCCTACAGGCTTTTCCT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

16-309950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309950
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309950
    reference: chr 16
allele count: 5074
allele frequency: 4.312572244509418e-2
allele num: 117656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-45C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-45C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-18C>T
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 7.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 4.75e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 4.25e1
  variant carriers: 644
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 10415
  bin: 3.25e1
  variant carriers: 689
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 217
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.75e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 3.75e1
  variant carriers: 698
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 14269
  bin: 2.75e1
  variant carriers: 637
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 306
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
num of homozygotes: 222
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

16-309951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309951
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309951
    reference: chr 16
allele count: 1
allele frequency: 8.484066922319883e-6
allele num: 117868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-44G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-44G>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-17G>A
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum

16-309953-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309953
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309953
    reference: chr 16
allele count: 2
allele frequency: 1.693193362682018e-5
allele num: 118120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-42T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-42T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-15T>C
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-15T>C
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14874
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

16-309954-GTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309954
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309952
    reference: chr 16
allele count: 1
allele frequency: 8.459378066524549e-6
allele num: 118212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-36_386-35delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-9_269-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-36_386-35delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-9_386-8delTC
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-9_172-8delTC
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GTC
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

16-309965-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309965
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309965
    reference: chr 16
allele count: 2
allele frequency: 1.680559290131756e-5
allele num: 119008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.172-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-30C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.269-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-30C>T
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.386-3C>T
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18037
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.386-3C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-309987-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309987
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309987
    reference: chr 16
allele count: 2
allele frequency: 1.669031127430527e-5
allele num: 119830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.405C>A
  hgvsp: ENST00000301678.3:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.405C>A
  hgvsp: ENST00000301679.2:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.386-8C>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.288C>A
  hgvsp: ENST00000420500.1:c.288C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.386-8C>A
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.405C>A
  hgvsp: ENST00000450082.2:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.405C>A
  hgvsp: ENST00000453430.1:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.405C>A
  hgvsp: ENST00000442458.2:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.191C>A
  hgvsp: ENST00000421000.1:c.191C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.405C>A
  hgvsp: ENST00000600536.1:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.405C>A
  hgvsp: ENST00000420046.1:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.405C>A
  hgvsp: ENST00000399932.3:c.405C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.386-8C>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

16-309997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309997
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309997
    reference: chr 16
allele count: 1
allele frequency: 8.337502084375522e-6
allele num: 119940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.388G>A
  hgvsp: ENSP00000402119.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.298G>A
  hgvsp: ENSP00000409309.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.415G>A
  hgvsp: ENSP00000399150.1:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.201G>A
  hgvsp: ENSP00000412581.1:p.Ala68Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.415G>A
  hgvsp: ENSP00000411394.2:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.415G>A
  hgvsp: ENSP00000301679.2:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.415G>A
  hgvsp: ENSP00000398433.1:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.388G>A
  hgvsp: ENSP00000407669.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.415G>A
  hgvsp: ENSP00000382814.3:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.415G>A
  hgvsp: ENSP00000301678.3:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.415G>A
  hgvsp: ENSP00000471331.1:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.415G>A
  hgvsp: ENSP00000397477.2:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala139Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

16-309998-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309998
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309998
    reference: chr 16
allele count: 1261
allele frequency: 1.051271363067945e-2
allele num: 119950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.299C>T
  hgvsp: ENSP00000409309.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.202C>T
  hgvsp: ENSP00000412581.1:p.Ala68Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.416C>T
  hgvsp: ENSP00000301679.2:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.416C>T
  hgvsp: ENSP00000411394.2:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.416C>T
  hgvsp: ENSP00000398433.1:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.389C>T
  hgvsp: ENSP00000402119.1:p.Ala130Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.416C>T
  hgvsp: ENSP00000399150.1:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.416C>T
  hgvsp: ENSP00000471331.1:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.416C>T
  hgvsp: ENSP00000301678.3:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.416C>T
  hgvsp: ENSP00000382814.3:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.416C>T
  hgvsp: ENSP00000397477.2:p.Ala139Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.389C>T
  hgvsp: ENSP00000407669.1:p.Ala130Val
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 11241
  bin: 3.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 5.25e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 17322
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16364
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 3.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
hgvs: p.Ala139Val
num of homozygotes: 65
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

16-309999-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 309999
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 309999
    reference: chr 16
allele count: 2
allele frequency: 1.666916704172292e-5
allele num: 119982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.417T>C
  hgvsp: ENST00000453430.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.417T>C
  hgvsp: ENST00000600536.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.417T>C
  hgvsp: ENST00000450082.2:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.417T>C
  hgvsp: ENST00000301679.2:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.300T>C
  hgvsp: ENST00000420500.1:c.300T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.417T>C
  hgvsp: ENST00000442458.2:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.390T>C
  hgvsp: ENST00000438220.1:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.203T>C
  hgvsp: ENST00000421000.1:c.203T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.417T>C
  hgvsp: ENST00000399932.3:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.417T>C
  hgvsp: ENST00000420046.1:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.417T>C
  hgvsp: ENST00000301678.3:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.390T>C
  hgvsp: ENST00000449945.1:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala139Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

16-310002-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310002
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310002
    reference: chr 16
allele count: 2
allele frequency: 1.666750004166875e-5
allele num: 119994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.206G>A
  hgvsp: ENST00000421000.1:c.206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.420G>A
  hgvsp: ENST00000450082.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.420G>A
  hgvsp: ENST00000301679.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000402119
  ensembl transcript: ENST00000438220
  gene symbol: ITFG3
  hgvsc: ENST00000438220.1:c.393G>A
  hgvsp: ENST00000438220.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.420G>A
  hgvsp: ENST00000301678.3:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.420G>A
  hgvsp: ENST00000442458.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.303G>A
  hgvsp: ENST00000420500.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.420G>A
  hgvsp: ENST00000399932.3:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.420G>A
  hgvsp: ENST00000600536.1:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.420G>A
  hgvsp: ENST00000420046.1:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.420G>A
  hgvsp: ENST00000453430.1:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.393G>A
  hgvsp: ENST00000449945.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val140Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

16-310005-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310005
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310005
    reference: chr 16
allele count: 1023
allele frequency: 8.526421070178362e-3
allele num: 119980
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.423G>A
  hgvsp: ENST00000399932.3:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.423G>A
  hgvsp: ENST00000453430.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.423G>A
  hgvsp: ENST00000420046.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.423G>A
  hgvsp: ENST00000450082.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.423G>A
  hgvsp: ENST00000442458.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.209G>A
  hgvsp: ENST00000421000.1:c.209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.423G>A
  hgvsp: ENST00000301678.3:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.306G>A
  hgvsp: ENST00000420500.1:c.306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.423G>A
  hgvsp: ENST00000600536.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.423G>A
  hgvsp: ENST00000301679.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.396G>A
  hgvsp: ENST00000449945.1:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 3.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 16796
  bin: 2.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 4.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11466
  bin: 3.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 16325
  bin: 2.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
hgvs: p.Ser141Ser
num of homozygotes: 55
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

16-310005-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310005
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310005
    reference: chr 16
allele count: 1
allele frequency: 8.334722453742291e-6
allele num: 119980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.423G>C
  hgvsp: ENST00000442458.2:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.423G>C
  hgvsp: ENST00000301678.3:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.423G>C
  hgvsp: ENST00000420046.1:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.423G>C
  hgvsp: ENST00000453430.1:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.396G>C
  hgvsp: ENST00000449945.1:c.396G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.306G>C
  hgvsp: ENST00000420500.1:c.306G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.423G>C
  hgvsp: ENST00000301679.2:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.209G>C
  hgvsp: ENST00000421000.1:c.209G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.423G>C
  hgvsp: ENST00000450082.2:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.423G>C
  hgvsp: ENST00000600536.1:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.423G>C
  hgvsp: ENST00000399932.3:c.423G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser141Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-310007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310007
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310007
    reference: chr 16
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.398G>A
  hgvsp: ENSP00000407669.1:p.Gly133Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.425G>A
  hgvsp: ENSP00000471331.1:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.425G>A
  hgvsp: ENSP00000399150.1:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.425G>A
  hgvsp: ENSP00000398433.1:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.425G>A
  hgvsp: ENSP00000411394.2:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.211G>A
  hgvsp: ENSP00000412581.1:p.Gly71Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.425G>A
  hgvsp: ENSP00000301678.3:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.425G>A
  hgvsp: ENSP00000382814.3:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.425G>A
  hgvsp: ENSP00000397477.2:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  hgvsc: ENST00000420500.1:c.308G>A
  hgvsp: ENSP00000409309.1:p.Gly103Glu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.425G>A
  hgvsp: ENSP00000301679.2:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly142Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

16-310007-GGGCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310007
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310003
    reference: chr 16
allele count: 44
allele frequency: 3.665811310694171e-4
allele num: 120028
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.426_429delGGCC
  hgvsp: ENSP00000471331.1:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.426_429delGGCC
  hgvsp: ENSP00000397477.2:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.426_429delGGCC
  hgvsp: ENSP00000398433.1:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.426_429delGGCC
  hgvsp: ENSP00000399150.1:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000409309
  ensembl transcript: ENST00000420500
  gene symbol: ITFG3
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.426_429delGGCC
  hgvsp: ENSP00000301678.3:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.212_215delGGCC
  hgvsp: ENSP00000412581.1:p.Ala72ThrfsTer86
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.426_429delGGCC
  hgvsp: ENSP00000411394.2:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.399_402delGGCC
  hgvsp: ENSP00000407669.1:p.Ala134ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.426_429delGGCC
  hgvsp: ENSP00000301679.2:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.426_429delGGCC
  hgvsp: ENSP00000382814.3:p.Ala143ThrfsTer67
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16794
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16518
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Ala143ThrfsTer67
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: GGGCC
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

16-310012-AACG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310012
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310009
    reference: chr 16
allele count: 44
allele frequency: 3.667033370003667e-4
allele num: 119988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.217_219delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.404_406delACG
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.431_433delACG
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 16614
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11567
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16555
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3708
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn144_Gly145delinsSer
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AACG
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-310013-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310013
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310013
    reference: chr 16
allele count: 4
allele frequency: 3.336391692384686e-5
allele num: 119890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.431A>G
  hgvsp: ENSP00000411394.2:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.404A>G
  hgvsp: ENSP00000407669.1:p.Asn135Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.217A>G
  hgvsp: ENSP00000412581.1:p.Asn73Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.431A>G
  hgvsp: ENSP00000399150.1:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.431A>G
  hgvsp: ENSP00000397477.2:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.431A>G
  hgvsp: ENSP00000301679.2:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.431A>G
  hgvsp: ENSP00000471331.1:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.431A>G
  hgvsp: ENSP00000382814.3:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.431A>G
  hgvsp: ENSP00000301678.3:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.431A>G
  hgvsp: ENSP00000398433.1:p.Asn144Ser
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16587
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21775
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn144Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

16-310014-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310014
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310014
    reference: chr 16
allele count: 1
allele frequency: 8.341675008341675e-6
allele num: 119880
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.432C>T
  hgvsp: ENST00000399932.3:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.218C>T
  hgvsp: ENST00000421000.1:c.218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.432C>T
  hgvsp: ENST00000453430.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.432C>T
  hgvsp: ENST00000301678.3:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.432C>T
  hgvsp: ENST00000450082.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.432C>T
  hgvsp: ENST00000442458.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.432C>T
  hgvsp: ENST00000420046.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.405C>T
  hgvsp: ENST00000449945.1:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.432C>T
  hgvsp: ENST00000600536.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.432C>T
  hgvsp: ENST00000301679.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn144Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

16-310015-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310015
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310015
    reference: chr 16
allele count: 2
allele frequency: 1.668474180362059e-5
allele num: 119870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.433G>A
  hgvsp: ENSP00000411394.2:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.219G>A
  hgvsp: ENSP00000412581.1:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.433G>A
  hgvsp: ENSP00000398433.1:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.433G>A
  hgvsp: ENSP00000382814.3:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.433G>A
  hgvsp: ENSP00000399150.1:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.433G>A
  hgvsp: ENSP00000471331.1:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.433G>A
  hgvsp: ENSP00000397477.2:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.406G>A
  hgvsp: ENSP00000407669.1:p.Gly136Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.433G>A
  hgvsp: ENSP00000301678.3:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.433G>A
  hgvsp: ENSP00000301679.2:p.Gly145Ser
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly145Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-310018-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310018
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310018
    reference: chr 16
allele count: 44
allele frequency: 3.666911127408494e-4
allele num: 119992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.436A>T
  hgvsp: ENSP00000301678.3:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.436A>T
  hgvsp: ENSP00000398433.1:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.222A>T
  hgvsp: ENSP00000412581.1:p.Ser75Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.436A>T
  hgvsp: ENSP00000397477.2:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.436A>T
  hgvsp: ENSP00000399150.1:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.436A>T
  hgvsp: ENSP00000382814.3:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.409A>T
  hgvsp: ENSP00000407669.1:p.Ser137Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.436A>T
  hgvsp: ENSP00000411394.2:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.436A>T
  hgvsp: ENSP00000301679.2:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.436A>T
  hgvsp: ENSP00000471331.1:p.Ser146Cys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16589
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16606
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser146Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-310022-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310022
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310022
    reference: chr 16
allele count: 1
allele frequency: 8.333750020834376e-6
allele num: 119994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.440C>A
  hgvsp: ENSP00000411394.2:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.440C>A
  hgvsp: ENSP00000382814.3:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.440C>A
  hgvsp: ENSP00000398433.1:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.440C>A
  hgvsp: ENSP00000471331.1:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.440C>A
  hgvsp: ENSP00000399150.1:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.226C>A
  hgvsp: ENSP00000412581.1:p.Thr76Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.440C>A
  hgvsp: ENSP00000301679.2:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.413C>A
  hgvsp: ENSP00000407669.1:p.Thr138Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.440C>A
  hgvsp: ENSP00000301678.3:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.440C>A
  hgvsp: ENSP00000397477.2:p.Thr147Lys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr147Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-310022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310022
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310022
    reference: chr 16
allele count: 1
allele frequency: 8.333750020834376e-6
allele num: 119994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.413C>T
  hgvsp: ENSP00000407669.1:p.Thr138Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.440C>T
  hgvsp: ENSP00000398433.1:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.440C>T
  hgvsp: ENSP00000411394.2:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.440C>T
  hgvsp: ENSP00000471331.1:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.440C>T
  hgvsp: ENSP00000382814.3:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.440C>T
  hgvsp: ENSP00000397477.2:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.440C>T
  hgvsp: ENSP00000301679.2:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.440C>T
  hgvsp: ENSP00000399150.1:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.226C>T
  hgvsp: ENSP00000412581.1:p.Thr76Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.440C>T
  hgvsp: ENSP00000301678.3:p.Thr147Met
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr147Met
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-310023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310023
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310023
    reference: chr 16
allele count: 3
allele frequency: 2.500458417376519e-5
allele num: 119978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.441G>A
  hgvsp: ENST00000453430.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.441G>A
  hgvsp: ENST00000301679.2:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.441G>A
  hgvsp: ENST00000442458.2:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.441G>A
  hgvsp: ENST00000450082.2:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.441G>A
  hgvsp: ENST00000301678.3:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.414G>A
  hgvsp: ENST00000449945.1:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.441G>A
  hgvsp: ENST00000399932.3:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.441G>A
  hgvsp: ENST00000420046.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.441G>A
  hgvsp: ENST00000600536.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.227G>A
  hgvsp: ENST00000421000.1:c.227G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr147Thr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-310026-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310026
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310026
    reference: chr 16
allele count: 2
allele frequency: 1.666472244904761e-5
allele num: 120014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.444C>G
  hgvsp: ENST00000420046.1:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.444C>G
  hgvsp: ENST00000399932.3:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.230C>G
  hgvsp: ENST00000421000.1:c.230C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.444C>G
  hgvsp: ENST00000450082.2:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.417C>G
  hgvsp: ENST00000449945.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.444C>G
  hgvsp: ENST00000301679.2:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.444C>G
  hgvsp: ENST00000600536.1:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.444C>G
  hgvsp: ENST00000453430.1:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.444C>G
  hgvsp: ENST00000301678.3:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.444C>G
  hgvsp: ENST00000442458.2:c.444C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu148Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

16-310030-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310030
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310030
    reference: chr 16
allele count: 21
allele frequency: 1.749416861046318e-4
allele num: 120040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.448G>A
  hgvsp: ENSP00000397477.2:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.448G>A
  hgvsp: ENSP00000398433.1:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.448G>A
  hgvsp: ENSP00000399150.1:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.448G>A
  hgvsp: ENSP00000301679.2:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.234G>A
  hgvsp: ENSP00000412581.1:p.Glu79Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.448G>A
  hgvsp: ENSP00000301678.3:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.448G>A
  hgvsp: ENSP00000411394.2:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.448G>A
  hgvsp: ENSP00000382814.3:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.421G>A
  hgvsp: ENSP00000407669.1:p.Glu141Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.448G>A
  hgvsp: ENSP00000471331.1:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu150Lys
num of homozygotes: 1
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-310038-TGTGGCCCAAGAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310038
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310026
    reference: chr 16
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsp: ENSP00000411394.2:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsp: ENSP00000398433.1:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsp: ENSP00000301679.2:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsp: ENSP00000397477.2:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsp: ENSP00000301678.3:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsp: ENSP00000412581.1:p.Gln84_Ala87del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsp: ENSP00000407669.1:p.Gln146_Ala149del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsp: ENSP00000382814.3:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsp: ENSP00000471331.1:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsp: ENSP00000399150.1:p.Gln155_Ala158del
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22137
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln155_Ala158del
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: TGTGGCCCAAGAC
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

16-310043-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310043
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310043
    reference: chr 16
allele count: 1
allele frequency: 8.329723786359244e-6
allele num: 120052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.247C>T
  hgvsp: ENSP00000412581.1:p.Ala83Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.461C>T
  hgvsp: ENSP00000398433.1:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.461C>T
  hgvsp: ENSP00000411394.2:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.461C>T
  hgvsp: ENSP00000399150.1:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.461C>T
  hgvsp: ENSP00000382814.3:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.461C>T
  hgvsp: ENSP00000397477.2:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.461C>T
  hgvsp: ENSP00000301679.2:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.461C>T
  hgvsp: ENSP00000301678.3:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.434C>T
  hgvsp: ENSP00000407669.1:p.Ala145Val
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.461C>T
  hgvsp: ENSP00000471331.1:p.Ala154Val
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4281
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala154Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

16-310051-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310051
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310051
    reference: chr 16
allele count: 3
allele frequency: 2.498292833230626e-5
allele num: 120082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.469G>A
  hgvsp: ENSP00000411394.2:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.469G>A
  hgvsp: ENSP00000398433.1:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.469G>A
  hgvsp: ENSP00000399150.1:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.469G>A
  hgvsp: ENSP00000382814.3:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.469G>A
  hgvsp: ENSP00000301678.3:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.469G>A
  hgvsp: ENSP00000301679.2:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.442G>A
  hgvsp: ENSP00000407669.1:p.Val148Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.469G>A
  hgvsp: ENSP00000397477.2:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.255G>A
  hgvsp: ENSP00000412581.1:p.Val86Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.469G>A
  hgvsp: ENSP00000471331.1:p.Val157Met
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val157Met
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-310059-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310059
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310059
    reference: chr 16
allele count: 1
allele frequency: 8.324315325064513e-6
allele num: 120130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.477C>A
  hgvsp: ENST00000301678.3:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.477C>A
  hgvsp: ENST00000399932.3:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.450C>A
  hgvsp: ENST00000449945.1:c.450C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.477C>A
  hgvsp: ENST00000450082.2:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.477C>A
  hgvsp: ENST00000600536.1:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.477C>A
  hgvsp: ENST00000442458.2:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.477C>A
  hgvsp: ENST00000420046.1:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.477C>A
  hgvsp: ENST00000453430.1:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.477C>A
  hgvsp: ENST00000301679.2:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.263C>A
  hgvsp: ENST00000421000.1:c.263C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu159Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

16-310059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310059
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310059
    reference: chr 16
allele count: 2
allele frequency: 1.664863065012903e-5
allele num: 120130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.477C>T
  hgvsp: ENST00000442458.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.450C>T
  hgvsp: ENST00000449945.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.477C>T
  hgvsp: ENST00000399932.3:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.477C>T
  hgvsp: ENST00000301679.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.477C>T
  hgvsp: ENST00000301678.3:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.477C>T
  hgvsp: ENST00000420046.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.477C>T
  hgvsp: ENST00000453430.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.263C>T
  hgvsp: ENST00000421000.1:c.263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.477C>T
  hgvsp: ENST00000450082.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.477C>T
  hgvsp: ENST00000600536.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6535
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10117
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Leu159Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-310060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310060
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310060
    reference: chr 16
allele count: 3
allele frequency: 2.497211447217274e-5
allele num: 120134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.478G>A
  hgvsp: ENSP00000411394.2:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.451G>A
  hgvsp: ENSP00000407669.1:p.Val151Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.264G>A
  hgvsp: ENSP00000412581.1:p.Val89Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.478G>A
  hgvsp: ENSP00000471331.1:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.478G>A
  hgvsp: ENSP00000399150.1:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.478G>A
  hgvsp: ENSP00000398433.1:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.478G>A
  hgvsp: ENSP00000301679.2:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.478G>A
  hgvsp: ENSP00000382814.3:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.478G>A
  hgvsp: ENSP00000397477.2:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.478G>A
  hgvsp: ENSP00000301678.3:p.Val160Met
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val160Met
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-310060-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310060
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310060
    reference: chr 16
allele count: 1
allele frequency: 8.324038157390913e-6
allele num: 120134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.478G>T
  hgvsp: ENSP00000398433.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.478G>T
  hgvsp: ENSP00000411394.2:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.451G>T
  hgvsp: ENSP00000407669.1:p.Val151Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.478G>T
  hgvsp: ENSP00000399150.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.264G>T
  hgvsp: ENSP00000412581.1:p.Val89Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.478G>T
  hgvsp: ENSP00000301678.3:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.478G>T
  hgvsp: ENSP00000471331.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.478G>T
  hgvsp: ENSP00000301679.2:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.478G>T
  hgvsp: ENSP00000397477.2:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.478G>T
  hgvsp: ENSP00000382814.3:p.Val160Leu
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2265
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val160Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

16-310063-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310063
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310063
    reference: chr 16
allele count: 1
allele frequency: 8.321959988016378e-6
allele num: 120164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.481G>A
  hgvsp: ENSP00000471331.1:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.481G>A
  hgvsp: ENSP00000411394.2:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.481G>A
  hgvsp: ENSP00000301678.3:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.481G>A
  hgvsp: ENSP00000398433.1:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.481G>A
  hgvsp: ENSP00000399150.1:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.481G>A
  hgvsp: ENSP00000301679.2:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.454G>A
  hgvsp: ENSP00000407669.1:p.Glu152Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000382814
  ensembl transcript: ENST00000399932
  gene symbol: ITFG3
  hgvsc: ENST00000399932.3:c.481G>A
  hgvsp: ENSP00000382814.3:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.481G>A
  hgvsp: ENSP00000397477.2:p.Glu161Lys
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.267G>A
  hgvsp: ENSP00000412581.1:p.Glu90Lys
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu161Lys
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-310067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 310067
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 310067
    reference: chr 16
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000407669
  ensembl transcript: ENST00000449945
  gene symbol: ITFG3
  hgvsc: ENST00000449945.1:c.458G>A
  hgvsp: ENSP00000407669.1:p.Cys153Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000398433
  ensembl transcript: ENST00000420046
  gene symbol: ITFG3
  hgvsc: ENST00000420046.1:c.485G>A
  hgvsp: ENSP00000398433.1:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000411394
  ensembl transcript: ENST00000450082
  gene symbol: ITFG3
  hgvsc: ENST00000450082.2:c.485G>A
  hgvsp: ENSP00000411394.2:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000269881
  ensembl protein: ENSP00000471331
  ensembl transcript: ENST00000600536
  gene symbol: ITFG3
  hgvsc: ENST00000600536.1:c.485G>A
  hgvsp: ENSP00000471331.1:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000397477
  ensembl transcript: ENST00000442458
  gene symbol: ITFG3
  hgvsc: ENST00000442458.2:c.485G>A
  hgvsp: ENSP00000397477.2:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000412581
  ensembl transcript: ENST00000421000
  gene symbol: ITFG3
  hgvsc: ENST00000421000.1:c.271G>A
  hgvsp: ENSP00000412581.1:p.Cys91Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301678
  ensembl transcript: ENST00000301678
  gene symbol: ITFG3
  hgvsc: ENST00000301678.3:c.485G>A
  hgvsp: ENSP00000301678.3:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000399150
  ensembl transcript: ENST00000453430
  gene symbol: ITFG3
  hgvsc: ENST00000453430.1:c.485G>A
  hgvsp: ENSP00000399150.1:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167930
  ensembl protein: ENSP00000301679
  ensembl transcript: ENST00000301679
  gene symbol: ITFG3
  hgvsc: ENST00000301679.2:c.485G>A
  hgvsp: ENSP00000301679.2:p.Cys162Tyr
  variant of: http://identifiers.org/hgnc/14163
canonical: true
consequence: missense
filter: PASS
hgvs: p.Cys162Tyr
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 345
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6236
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52243
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

DP
type: SiteQuality
SIO_000300: 8.315213e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.862e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.544e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.79e-1

GenotypeDepth
all individuals: 378
bin: 8.25e1
variant carriers: 5

GenotypeDepth
all individuals: 48697
bin: 9.75e1
variant carriers: 375

GenotypeDepth
all individuals: 319
bin: 5.75e1
variant carriers: 10

GenotypeDepth
all individuals: 2623
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6208
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52310
bin: 9.75e1
variant carriers: 450

GenotypeQuality
all individuals: 263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 281
allele frequency: 4.210747145383163e-3
allele num: 66734
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 21
allele frequency: 3.175083156939824e-3
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.468555632342778e-3
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.040816326530612e-4
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.555555555555556e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 129
allele frequency: 7.814393021565301e-3
allele num: 16508
num of homozygotes: 4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.045e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

DP
type: SiteQuality
SIO_000300: 8.318081e6

QD
type: SiteQuality
SIO_000300: 1.541e1

GenotypeDepth
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 344
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48662
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.286551e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: -1.379e0

QD
type: SiteQuality
SIO_000300: 2.243e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-1

GenotypeDepth
all individuals: 474
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.298e1

MQ
type: SiteQuality
SIO_000300: 5.905e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.286407e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.39e-1

GenotypeDepth
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 292
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52223
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495594317568783e-5
allele num: 66732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.403e1

DP
type: SiteQuality
SIO_000300: 8.286345e6

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.461e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

GenotypeDepth
all individuals: 473
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 299
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52223
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318571759795966e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

DP
type: SiteQuality
SIO_000300: 8.286173e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeDepth
all individuals: 377
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

DP
type: SiteQuality
SIO_000300: 8.286017e6

VQSLOD
type: SiteQuality
SIO_000300: -2.221e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.377e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.895e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

GenotypeDepth
all individuals: 340
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3827
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 320
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52225
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 6273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 22
allele frequency: 2.244439910222404e-3
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

QD
type: SiteQuality
SIO_000300: 1.564e1

DP
type: SiteQuality
SIO_000300: 8.286106e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.26e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeDepth
all individuals: 320
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6223
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52220
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.284187e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: -2.097e0

FS
type: SiteQuality
SIO_000300: 1.3874e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

QD
type: SiteQuality
SIO_000300: 1.587e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeDepth
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48659
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52220
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 7.755e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: -6.96e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

DP
type: SiteQuality
SIO_000300: 8.283971e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.268e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.937e0

VQSLOD
type: SiteQuality
SIO_000300: -4.715e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 300
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52220
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.955e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

FS
type: SiteQuality
SIO_000300: 1.1965e1

QD
type: SiteQuality
SIO_000300: 7.02e0

DP
type: SiteQuality
SIO_000300: 8.283334e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeDepth
all individuals: 343
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 334
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52219
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.677e0

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.49e-1

QD
type: SiteQuality
SIO_000300: 1.336e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.2812e6

GenotypeDepth
all individuals: 345
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52218
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 207
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001110410852015e-5
allele num: 66642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.897e0

QD
type: SiteQuality
SIO_000300: 1.13e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.927e1

DP
type: SiteQuality
SIO_000300: 8.280874e6

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeDepth
all individuals: 2636
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48659
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 300
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52218
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502070952638214e-5
allele num: 66636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 2.47e0

QD
type: SiteQuality
SIO_000300: 1.28e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.61e-1

DP
type: SiteQuality
SIO_000300: 8.279989e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

GenotypeDepth
all individuals: 48659
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 834
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52218
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5591
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.274638e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.74e0

QD
type: SiteQuality
SIO_000300: 1.479e1

MQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.63e-1

GenotypeDepth
all individuals: 318
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 433
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023122570083896e-4
allele num: 9774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.615e-1

FS
type: SiteQuality
SIO_000300: 6.434e0

DP
type: SiteQuality
SIO_000300: 8.272975e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeDepth
all individuals: 801
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52217
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.046245140167792e-4
allele num: 9774
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.561e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 1.094e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.31e1

DP
type: SiteQuality
SIO_000300: 8.271051e6

GenotypeDepth
all individuals: 587
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52217
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592912705272256e-4
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.941e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.479e1

FS
type: SiteQuality
SIO_000300: 2.434e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 8.270952e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.555e0

GenotypeDepth
all individuals: 2363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 720
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.876e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

FS
type: SiteQuality
SIO_000300: 1.122e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.763e1

DP
type: SiteQuality
SIO_000300: 8.267991e6

GenotypeDepth
all individuals: 328
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52218
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16082
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

FS
type: SiteQuality
SIO_000300: 1.118e0

DP
type: SiteQuality
SIO_000300: 8.250525e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.22e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

GenotypeDepth
all individuals: 376
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52218
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 3.762906770221861e-4
allele num: 66438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16082
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

FS
type: SiteQuality
SIO_000300: 1.118e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 8.250525e6

GenotypeDepth
all individuals: 48658
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52215
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3227
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.025010250102501e-4
allele num: 9756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009691205682297e-5
allele num: 66452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.862891207153502e-4
allele num: 16104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

DP
type: SiteQuality
SIO_000300: 8.246367e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.264e1

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.97e-1

GenotypeDepth
all individuals: 310
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.316e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e0

DP
type: SiteQuality
SIO_000300: 8.235889e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.606e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeDepth
all individuals: 314
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507567991316408e-5
allele num: 66332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.09e-2

DP
type: SiteQuality
SIO_000300: 8.230227e6

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.32e-1

FS
type: SiteQuality
SIO_000300: 6.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.213e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeDepth
all individuals: 318
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507886245061673e-5
allele num: 66318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15750
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.904e1

MQRankSum
type: SiteQuality
SIO_000300: 2.47e0

QD
type: SiteQuality
SIO_000300: 1.08e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

FS
type: SiteQuality
SIO_000300: 7.425e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.933e0

DP
type: SiteQuality
SIO_000300: 8.229522e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

GenotypeDepth
all individuals: 406
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52215
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 685
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.136363636363636e-3
allele num: 880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

DP
type: SiteQuality
SIO_000300: 8.229122e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 1.218e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.235e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

GenotypeDepth
all individuals: 320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52215
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730103806228374e-4
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.028383381324558e-4
allele num: 9724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.037006852002777e-5
allele num: 66258
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.229122e6

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 1.218e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

QD
type: SiteQuality
SIO_000300: 1.235e1

GenotypeDepth
all individuals: 292
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52213
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5109391998066e-5
allele num: 66184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.311e0

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.042e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 8.228723e6

GenotypeDepth
all individuals: 100
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3751
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4481
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8868
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64694
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.396277679663089e-4
allele num: 14722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.353e0

DP
type: SiteQuality
SIO_000300: 1.600753e6

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeDepth
all individuals: 3034
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6921
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1927
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8907
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 924
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4703
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3873
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3571
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14922
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044713748432929e-4
allele num: 9572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540642139643804e-5
allele num: 64908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.319e0

QD
type: SiteQuality
SIO_000300: 2.364e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.635147e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

GenotypeDepth
all individuals: 5768
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2656
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8922
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 464
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3904
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4747
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.680919294494922e-5
allele num: 14968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

DP
type: SiteQuality
SIO_000300: 1.645714e6

FS
type: SiteQuality
SIO_000300: 5.127e0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

GenotypeDepth
all individuals: 1567
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4747
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2656
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8922
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2069
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3904
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539645881447267e-5
allele num: 64950
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14968
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.025e1

FS
type: SiteQuality
SIO_000300: 5.127e0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 1.645714e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

GenotypeDepth
all individuals: 3039
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8927
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2659
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3637
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17204
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3924
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4767
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.505491937368544e-4
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64916
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.251e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

DP
type: SiteQuality
SIO_000300: 1.649336e6

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

FS
type: SiteQuality
SIO_000300: 7.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 45
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3986
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3701
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8933
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7184
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537515375153751e-5
allele num: 65040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.63e-1

FS
type: SiteQuality
SIO_000300: 4.746e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.661465e6

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.147e1

GenotypeDepth
all individuals: 3304
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10174
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7255
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8945
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4007
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18884
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537042729787888e-5
allele num: 65060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.682e1

QD
type: SiteQuality
SIO_000300: 9.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.670235e6

FS
type: SiteQuality
SIO_000300: 8.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.559e0

GenotypeDepth
all individuals: 16721
bin: 2.25e1
variant carriers: 419

GenotypeQuality
all individuals: 719
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3756
bin: 8.25e1
variant carriers: 19

GenotypeQuality
all individuals: 707
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 973
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 361
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1745
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 18458
bin: 6.25e1
variant carriers: 12

GenotypeQuality
all individuals: 380
bin: 4.75e1
variant carriers: 14

GenotypeQuality
all individuals: 12963
bin: 9.75e1
variant carriers: 4714

GenotypeQuality
all individuals: 3504
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 380
bin: 5.25e1
variant carriers: 12

GenotypeQuality
all individuals: 141
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1975
bin: 8.75e1
variant carriers: 13

GenotypeQuality
all individuals: 57
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4590
bin: 7.75e1
variant carriers: 24

GenotypeQuality
all individuals: 325
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2517
bin: 9.25e1
variant carriers: 15

GenotypeQuality
all individuals: 6823
bin: 6.75e1
variant carriers: 20

East Asian
type: Population
allele count: 1418
allele frequency: 1.659644194756554e-1
allele num: 8544
num of homozygotes: 119

Latino
type: Population
allele count: 559
allele frequency: 4.889783065080476e-2
allele num: 11432
num of homozygotes: 20

African
type: Population
allele count: 342
allele frequency: 3.555832813474735e-2
allele num: 9618
num of homozygotes: 6

Other
type: Population
allele count: 40
allele frequency: 4.597701149425287e-2
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1660
allele frequency: 2.541179352152348e-2
allele num: 65324
num of homozygotes: 36

European (Finnish)
type: Population
allele count: 93
allele frequency: 1.470123300663927e-2
allele num: 6326
num of homozygotes: 0

South Asian
type: Population
allele count: 962
allele frequency: 6.1896795779179e-2
allele num: 15542
num of homozygotes: 41

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.49e-2

FS
type: SiteQuality
SIO_000300: 1.216e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

DP
type: SiteQuality
SIO_000300: 1.748202e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.389e1

GenotypeDepth
all individuals: 436
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2817
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4977
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9790
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1687
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19850
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529472943623627e-5
allele num: 65382
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 1.737142e6

QD
type: SiteQuality
SIO_000300: 9.73e0

FS
type: SiteQuality
SIO_000300: 1.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

GenotypeDepth
all individuals: 120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9799
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2827
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1576
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3835
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.733624454148471e-5
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527230520174715e-5
allele num: 65478
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.661e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.667e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.69e-1

DP
type: SiteQuality
SIO_000300: 1.741519e6

GenotypeDepth
all individuals: 120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4152
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9800
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.339546088500064e-5
allele num: 15774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

QD
type: SiteQuality
SIO_000300: 2.082e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.996e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

DP
type: SiteQuality
SIO_000300: 1.744088e6

GenotypeDepth
all individuals: 36
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 889
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9814
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2838
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3913
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5122
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7709
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.237317495669389e-4
allele num: 16164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.767151e6

VQSLOD
type: SiteQuality
SIO_000300: -1.543e-1

FS
type: SiteQuality
SIO_000300: 1.207e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.351e0

QD
type: SiteQuality
SIO_000300: 1.129e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeDepth
all individuals: 439
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1837
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22577
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9823
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7902
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3991
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022609116189094e-5
allele num: 66168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.788914e6

FS
type: SiteQuality
SIO_000300: 4.542e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 9.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.292e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.081e-1

GenotypeDepth
all individuals: 21
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 438
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4008
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9823
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2858
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5239
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510117789187557e-5
allele num: 66220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.893999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 2.615e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.173e0

QD
type: SiteQuality
SIO_000300: 8.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.791774e6

GenotypeDepth
all individuals: 146
bin: 7.25e1
variant carriers: 78

GenotypeDepth
all individuals: 223
bin: 6.75e1
variant carriers: 109

GenotypeDepth
all individuals: 45
bin: 8.75e1
variant carriers: 24

GenotypeDepth
all individuals: 3517
bin: 4.25e1
variant carriers: 102

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7743
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 563
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 22416
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10722
bin: 9.75e1
variant carriers: 1192

GenotypeQuality
all individuals: 4132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3926
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5101
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 1

African
type: Population
allele count: 2
allele frequency: 2.051702913418137e-4
allele num: 9748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 2.009273570324575e-3
allele num: 6470
num of homozygotes: 0

Latino
type: Population
allele count: 185
allele frequency: 1.604509973980919e-2
allele num: 11530
num of homozygotes: 1

South Asian
type: Population
allele count: 41
allele frequency: 2.486355366889023e-3
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.455893455742458e-4
allele num: 66226
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 7.882882882882882e-3
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 957
allele frequency: 1.113049546406141e-1
allele num: 8598
num of homozygotes: 64

VQSLOD
type: SiteQuality
SIO_000300: 6.17e0

DP
type: SiteQuality
SIO_000300: 1.823491e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.96e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.844e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

QD
type: SiteQuality
SIO_000300: 1.43e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeDepth
all individuals: 1892
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3615
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9996
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7881
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019597185735423e-5
allele num: 66234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

MQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.58e-1

FS
type: SiteQuality
SIO_000300: 2.3044e1

DP
type: SiteQuality
SIO_000300: 1.80115e6

VQSLOD
type: SiteQuality
SIO_000300: -3.511e0

GenotypeDepth
all individuals: 467
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 122
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 36
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22515
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9996
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 561
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7891
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509707418702255e-5
allele num: 66238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.864e0

VQSLOD
type: SiteQuality
SIO_000300: 9.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.311e1

FS
type: SiteQuality
SIO_000300: 7.66e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.801275e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeDepth
all individuals: 59
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 4187
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10749
bin: 9.75e1
variant carriers: 954

GenotypeQuality
all individuals: 556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7706
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 21976
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5111
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2209
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.567743104854545e-4
allele num: 66206
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 2.25420495925091e-3
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.424536307431204e-4
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 971
allele frequency: 9.948770491803278e-2
allele num: 9760
num of homozygotes: 55

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.643340857787811e-3
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.821807e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

FS
type: SiteQuality
SIO_000300: 5.23e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

GenotypeDepth
all individuals: 1949
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10749
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5111
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.128668171557562e-3
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.64e-2

DP
type: SiteQuality
SIO_000300: 1.821807e6

FS
type: SiteQuality
SIO_000300: 5.23e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.431e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

GenotypeDepth
all individuals: 3711
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7851
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10126
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2248
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.462e0

FS
type: SiteQuality
SIO_000300: 1.392e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 1.807995e6

MQ
type: SiteQuality
SIO_000300: 5.635e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -2.972e0

QD
type: SiteQuality
SIO_000300: 5.66e0

GenotypeDepth
all individuals: 506
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10126
bin: 9.75e1
variant carriers: 42

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7851
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5186
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.049600327936052e-4
allele num: 9758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.621072088724584e-4
allele num: 6492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.737234652897303e-4
allele num: 66234
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

FS
type: SiteQuality
SIO_000300: 1.392e0

QD
type: SiteQuality
SIO_000300: 5.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.972e0

DP
type: SiteQuality
SIO_000300: 1.807995e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.462e0

MQ
type: SiteQuality
SIO_000300: 5.635e1

GenotypeQuality
all individuals: 21987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10130
bin: 9.75e1
variant carriers: 42

GenotypeQuality
all individuals: 7799
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3943
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.050861361771944e-4
allele num: 9752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.7407015741608e-4
allele num: 66194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.613964933866503e-4
allele num: 6502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.806893e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

FS
type: SiteQuality
SIO_000300: 6.709e0

MQRankSum
type: SiteQuality
SIO_000300: -3.529e0

VQSLOD
type: SiteQuality
SIO_000300: 8.5e-1

MQ
type: SiteQuality
SIO_000300: 5.548e1

QD
type: SiteQuality
SIO_000300: 7.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.008e0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7793
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3942
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10090
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.050338818973863e-5
allele num: 66112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

DP
type: SiteQuality
SIO_000300: 1.804717e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.08e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

GenotypeQuality
all individuals: 569
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21773
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10093
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3933
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.025851456709069e-4
allele num: 9748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 1.878e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

QD
type: SiteQuality
SIO_000300: 1.481e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 1.80501e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

GenotypeQuality
all individuals: 577
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3934
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10094
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.025993282294913e-5
allele num: 66094
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

FS
type: SiteQuality
SIO_000300: 2.985e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 1.804949e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 8.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10131
bin: 9.75e1
variant carriers: 42

GenotypeQuality
all individuals: 199
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2886
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7807
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.051282051282051e-4
allele num: 9750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.611128189363664e-4
allele num: 6506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.740181268882175e-4
allele num: 66200
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

FS
type: SiteQuality
SIO_000300: 1.137e1

DP
type: SiteQuality
SIO_000300: 1.805841e6

MQ
type: SiteQuality
SIO_000300: 5.604e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.982e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 7.66e0

VQSLOD
type: SiteQuality
SIO_000300: -3.212e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.659e0

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21859
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10103
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7803
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510665296996797e-5
allele num: 66196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

QD
type: SiteQuality
SIO_000300: 1.355e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

VQSLOD
type: SiteQuality
SIO_000300: -2.792e-1

FS
type: SiteQuality
SIO_000300: 2.178e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.805649e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10103
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21859
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7803
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.178e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

DP
type: SiteQuality
SIO_000300: 1.805649e6

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.792e-1

QD
type: SiteQuality
SIO_000300: 1.355e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

GenotypeQuality
all individuals: 555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10103
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 246
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5202
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7822
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.027115858668858e-4
allele num: 9736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.534683855125844e-4
allele num: 6516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5109391998066e-5
allele num: 66184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.73e-1

FS
type: SiteQuality
SIO_000300: 2.86e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.805706e6

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7832
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10104
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510665296996797e-5
allele num: 66196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

FS
type: SiteQuality
SIO_000300: 9.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

QD
type: SiteQuality
SIO_000300: 1.325e1

MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

DP
type: SiteQuality
SIO_000300: 1.806266e6

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3965
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10117
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5216
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.151096570943899e-3
allele num: 16506
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020326799359691e-5
allele num: 66218
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e0

DP
type: SiteQuality
SIO_000300: 1.807967e6

QD
type: SiteQuality
SIO_000300: 1.405e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.039e0

GenotypeQuality
all individuals: 5213
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7872
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510619656182966e-5
allele num: 66198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.19e0

QD
type: SiteQuality
SIO_000300: 2.77e0

FS
type: SiteQuality
SIO_000300: 1.157e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.109e0

MQ
type: SiteQuality
SIO_000300: 5.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.80908e6

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5229
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7896
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.637e0

DP
type: SiteQuality
SIO_000300: 1.809887e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.69e0

QD
type: SiteQuality
SIO_000300: 6.73e0

GenotypeQuality
all individuals: 3983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7899
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10112
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21947
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5230
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509753004408479e-5
allele num: 66236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.128e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-2

DP
type: SiteQuality
SIO_000300: 1.812528e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.121e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

GenotypeQuality
all individuals: 5246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10117
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4287
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

FS
type: SiteQuality
SIO_000300: 2.936e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.814532e6

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 2900
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22323
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.024800163968026e-4
allele num: 9758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 2.936e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 1.814532e6

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeQuality
all individuals: 2265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22417
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10120
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5250
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509297271190534e-5
allele num: 66256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
SIO_000300: 1.181e1

DP
type: SiteQuality
SIO_000300: 1.815063e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5250
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22417
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10120
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.815063e6

QD
type: SiteQuality
SIO_000300: 1.181e1

MQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 4.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5252
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7992
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10119
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22545
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66276
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.156e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

DP
type: SiteQuality
SIO_000300: 1.816004e6

FS
type: SiteQuality
SIO_000300: 7.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.443e0

VQSLOD
type: SiteQuality
SIO_000300: 9.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3