17-674580-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674580
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674580
    reference: chr 17
allele count: 5
allele frequency: 4.133392854190433e-5
allele num: 120966
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1092C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.40C>G
  hgvsp: ENSP00000460423.1:p.Ala14Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.501C>G
  hgvsp: ENST00000536578.1:c.501C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*424C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.528C>G
  hgvsp: ENST00000301329.6:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.528C>G
  hgvsp: ENST00000576419.1:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.65C>G
  hgvsp: ENST00000573137.1:c.65C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.573C>G
  hgvsp: ENST00000301328.5:c.573C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*421C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*551C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*483C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.567C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala14Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

17-674585-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674585
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674585
    reference: chr 17
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*478C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.496C>T
  hgvsp: ENST00000536578.1:c.496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.523C>T
  hgvsp: ENST00000576419.1:c.523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*419C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*546C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.60C>T
  hgvsp: ENST00000573137.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.35C>T
  hgvsp: ENST00000575528.1:c.35C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.523C>T
  hgvsp: ENST00000301329.6:c.523C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*416C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.568C>T
  hgvsp: ENST00000301328.5:c.568C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1087C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.562C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu175Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

17-674592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674592
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674592
    reference: chr 17
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.53G>A
  hgvsp: ENST00000573137.1:c.53G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.516G>A
  hgvsp: ENST00000576419.1:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.516G>A
  hgvsp: ENST00000301329.6:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1080G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*412G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.561G>A
  hgvsp: ENST00000301328.5:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*409G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.555G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.28G>A
  hgvsp: ENSP00000460423.1:p.Gly10Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*471G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.489G>A
  hgvsp: ENST00000536578.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*539G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly10Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-674593-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674593
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674592
    reference: chr 17
allele count: 2
allele frequency: 1.650655310158133e-5
allele num: 121164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*469delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*410delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.514delA
  hgvsp: ENSP00000301329.6:p.Arg172GlyfsTer43
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.514delA
  hgvsp: ENSP00000460634.1:p.Arg172GlyfsTer?
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*407delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*537delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.487delA
  hgvsp: ENSP00000444315.1:p.Arg163GlyfsTer43
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.559delA
  hgvsp: ENSP00000301328.5:p.Arg187GlyfsTer43
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.26delA
  hgvsp: ENSP00000460423.1:p.Leu11PhefsTer6
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.553delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.51delA
  hgvsp: ENSP00000458849.1:p.Arg18GlyfsTer14
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1078delA
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg172GlyfsTer43
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: CT
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

17-674602-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674602
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674602
    reference: chr 17
allele count: 88
allele frequency: 7.258929307927081e-4
allele num: 121230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1070A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.18A>G
  hgvsp: ENSP00000460423.1:p.Lys7Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.43A>G
  hgvsp: ENSP00000458849.1:p.Glu15Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.506A>G
  hgvsp: ENSP00000460634.1:p.Glu169Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.551A>G
  hgvsp: ENSP00000301328.5:p.Glu184Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*461A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.506A>G
  hgvsp: ENSP00000301329.6:p.Glu169Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.479A>G
  hgvsp: ENSP00000444315.1:p.Glu160Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*402A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*399A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.545A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*529A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8033
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5000
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu169Gly
num of homozygotes: 1
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-674608-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674608
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674608
    reference: chr 17
allele count: 2
allele frequency: 1.649294102124291e-5
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*455A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.500A>T
  hgvsp: ENSP00000460634.1:p.Asp167Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*393A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.545A>T
  hgvsp: ENSP00000301328.5:p.Asp182Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.12A>T
  hgvsp: ENSP00000460423.1:p.Met5Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.37A>T
  hgvsp: ENSP00000458849.1:p.Asp13Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*396A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.473A>T
  hgvsp: ENSP00000444315.1:p.Asp158Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.500A>T
  hgvsp: ENSP00000301329.6:p.Asp167Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*523A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.539A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1064A>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp167Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

17-674608-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674608
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674608
    reference: chr 17
allele count: 2
allele frequency: 1.649294102124291e-5
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.12A>G
  hgvsp: ENSP00000460423.1:p.Met5Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.37A>G
  hgvsp: ENSP00000458849.1:p.Asp13Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*396A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.500A>G
  hgvsp: ENSP00000301329.6:p.Asp167Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*393A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*523A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.545A>G
  hgvsp: ENSP00000301328.5:p.Asp182Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.500A>G
  hgvsp: ENSP00000460634.1:p.Asp167Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1064A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.539A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.473A>G
  hgvsp: ENSP00000444315.1:p.Asp158Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*455A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp167Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-674609-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674609
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674608
    reference: chr 17
allele count: 2
allele frequency: 1.64923970049807e-5
allele num: 121268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.543delA
  hgvsp: ENSP00000301328.5:p.Asp182MetfsTer48
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1062delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.10delA
  hgvsp: ENSP00000460423.1:p.Lys4ArgfsTer2
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*453delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*394delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*391delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.471delA
  hgvsp: ENSP00000444315.1:p.Asp158MetfsTer48
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.498delA
  hgvsp: ENSP00000301329.6:p.Asp167MetfsTer48
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.537delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.35delA
  hgvsp: ENSP00000458849.1:p.Asp13MetfsTer19
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*521delA
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.498delA
  hgvsp: ENSP00000460634.1:p.Asp167MetfsTer?
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp167MetfsTer48
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: CT
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-674614-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674614
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674614
    reference: chr 17
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.494A>T
  hgvsp: ENSP00000301329.6:p.Glu165Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.494A>T
  hgvsp: ENSP00000460634.1:p.Glu165Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.6A>T
  hgvsp: ENSP00000460423.1:p.Lys3Ter
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*449A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.533A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*387A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1058A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.539A>T
  hgvsp: ENSP00000301328.5:p.Glu180Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*517A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.31A>T
  hgvsp: ENSP00000458849.1:p.Glu11Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.467A>T
  hgvsp: ENSP00000444315.1:p.Glu156Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*390A>T
  variant of: http://identifiers.org/hgnc/14111
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys3Ter
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-674619-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674619
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674619
    reference: chr 17
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460423
  ensembl transcript: ENST00000575528
  gene symbol: GLOD4
  hgvsc: ENST00000575528.1:c.1T>G
  hgvsp: ENST00000575528.1:c.1T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.489T>G
  hgvsp: ENSP00000301329.6:p.Ile163Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.26T>G
  hgvsp: ENSP00000458849.1:p.Ile9Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.462T>G
  hgvsp: ENSP00000444315.1:p.Ile154Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*385T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*444T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*512T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.489T>G
  hgvsp: ENSP00000460634.1:p.Ile163Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.528T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.534T>G
  hgvsp: ENSP00000301328.5:p.Ile178Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*382T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1053T>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile163Met
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

17-674626-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674626
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674626
    reference: chr 17
allele count: 3
allele frequency: 2.473410833539451e-5
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*378T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.482T>A
  hgvsp: ENSP00000460634.1:p.Met161Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*505T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1046T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*437T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.482T>A
  hgvsp: ENSP00000301329.6:p.Met161Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.19T>A
  hgvsp: ENSP00000458849.1:p.Met7Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.527T>A
  hgvsp: ENSP00000301328.5:p.Met176Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.521T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.455T>A
  hgvsp: ENSP00000444315.1:p.Met152Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*375T>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met161Lys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-674629-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674629
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674629
    reference: chr 17
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*372G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*502G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.479G>C
  hgvsp: ENSP00000460634.1:p.Gly160Ala
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.524G>C
  hgvsp: ENSP00000301328.5:p.Gly175Ala
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*375G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.452G>C
  hgvsp: ENSP00000444315.1:p.Gly151Ala
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*434G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.16G>C
  hgvsp: ENSP00000458849.1:p.Gly6Ala
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1043G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.518G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.479G>C
  hgvsp: ENSP00000301329.6:p.Gly160Ala
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly160Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

17-674629-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674629
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674629
    reference: chr 17
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1043G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*434G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458849
  ensembl transcript: ENST00000573137
  gene symbol: GLOD4
  hgvsc: ENST00000573137.1:c.16G>A
  hgvsp: ENSP00000458849.1:p.Gly6Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*375G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.479G>A
  hgvsp: ENSP00000301329.6:p.Gly160Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.479G>A
  hgvsp: ENSP00000460634.1:p.Gly160Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.524G>A
  hgvsp: ENSP00000301328.5:p.Gly175Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.452G>A
  hgvsp: ENSP00000444315.1:p.Gly151Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*372G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.518G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*502G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly160Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

17-674649-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674649
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674649
    reference: chr 17
allele count: 2
allele frequency: 1.649892756970797e-5
allele num: 121220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*482C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.459C>G
  hgvsp: ENSP00000301329.6:p.Asn153Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.504C>G
  hgvsp: ENSP00000301328.5:p.Asn168Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*414C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1023C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.498C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.459C>G
  hgvsp: ENSP00000460634.1:p.Asn153Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.432C>G
  hgvsp: ENSP00000444315.1:p.Asn144Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*355C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*352C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11702
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn153Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

17-674661-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674661
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674661
    reference: chr 17
allele count: 3
allele frequency: 2.476269087907552e-5
allele num: 121150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*340A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.486A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.492A>G
  hgvsp: ENST00000301328.5:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.1011A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*470A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.447A>G
  hgvsp: ENST00000576419.1:c.447A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.447A>G
  hgvsp: ENST00000301329.6:c.447A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*402A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.420A>G
  hgvsp: ENST00000536578.1:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*343A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln149Gln
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/17-674673-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674673
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674673
    reference: chr 17
allele count: 1
allele frequency: 8.276227364518158e-6
allele num: 120828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*458G>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.480G>T
  hgvsp: ENST00000301328.5:c.480G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.474G>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.408G>T
  hgvsp: ENST00000536578.1:c.408G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*390G>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.435G>T
  hgvsp: ENST00000301329.6:c.435G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.999G>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.435G>T
  hgvsp: ENST00000576419.1:c.435G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*331G>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*328G>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val145Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

17-674676-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674676
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674676
    reference: chr 17
allele count: 2
allele frequency: 1.656534199148542e-5
allele num: 120734
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.432A>C
  hgvsp: ENST00000301329.6:c.432A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.405A>C
  hgvsp: ENST00000536578.1:c.405A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*325A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.996A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.471A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.432A>C
  hgvsp: ENST00000576419.1:c.432A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*455A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*387A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*328A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.477A>C
  hgvsp: ENST00000301328.5:c.477A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala144Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

17-674679-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674679
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674679
    reference: chr 17
allele count: 2
allele frequency: 1.658622348277521e-5
allele num: 120582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.468A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*325A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*322A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.429A>G
  hgvsp: ENST00000576419.1:c.429A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.429A>G
  hgvsp: ENST00000301329.6:c.429A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.474A>G
  hgvsp: ENST00000301328.5:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.402A>G
  hgvsp: ENST00000536578.1:c.402A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*384A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*452A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.993A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu143Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

17-674696-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674696
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674696
    reference: chr 17
allele count: 13
allele frequency: 1.086738447134354e-4
allele num: 119624
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.412G>C
  hgvsp: ENSP00000301329.6:p.Val138Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.457G>C
  hgvsp: ENSP00000301328.5:p.Val153Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.385G>C
  hgvsp: ENSP00000444315.1:p.Val129Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*435G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*367G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.412G>C
  hgvsp: ENSP00000460634.1:p.Val138Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.976G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*305G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*291G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*308G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.451G>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7924
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val138Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

17-674696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674696
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674696
    reference: chr 17
allele count: 2
allele frequency: 1.671905303283622e-5
allele num: 119624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*308G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*367G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*435G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.457G>A
  hgvsp: ENSP00000301328.5:p.Val153Ile
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.976G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.451G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.412G>A
  hgvsp: ENSP00000460634.1:p.Val138Ile
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.385G>A
  hgvsp: ENSP00000444315.1:p.Val129Ile
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*291G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*305G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.412G>A
  hgvsp: ENSP00000301329.6:p.Val138Ile
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val138Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

17-674707-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674707
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674707
    reference: chr 17
allele count: 2
allele frequency: 1.683076664142052e-5
allele num: 118830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-6C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-6C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.407-6C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

17-674708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674708
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674708
    reference: chr 17
allele count: 1
allele frequency: 8.415100055539661e-6
allele num: 118834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-7C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-7C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.407-7C>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-674712-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674712
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674712
    reference: chr 17
allele count: 1
allele frequency: 8.435259384226064e-6
allele num: 118550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-11T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-11T>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

17-674714-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674714
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674714
    reference: chr 17
allele count: 3
allele frequency: 2.531944702327701e-5
allele num: 118486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-13T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-13T>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

17-674724-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674724
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674724
    reference: chr 17
allele count: 1
allele frequency: 8.490982576503753e-6
allele num: 117772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-23A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-23A>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

17-674724-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674724
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674724
    reference: chr 17
allele count: 3
allele frequency: 2.547294772951126e-5
allele num: 117772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-23A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-23A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

17-674724-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674724
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674724
    reference: chr 17
allele count: 3
allele frequency: 2.547294772951126e-5
allele num: 117772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-23A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-23A>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

17-674727-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674727
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674727
    reference: chr 17
allele count: 2
allele frequency: 1.701229989282251e-5
allele num: 117562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-26T>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-26T>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-674727-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674727
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674726
    reference: chr 17
allele count: 1
allele frequency: 8.506149946411256e-6
allele num: 117562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-27delG
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-27delG
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: AC
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

17-674728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674728
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674728
    reference: chr 17
allele count: 1
allele frequency: 8.524422470377632e-6
allele num: 117310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-27G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-27G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

17-674732-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674732
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674732
    reference: chr 17
allele count: 3
allele frequency: 2.560906902497738e-5
allele num: 117146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-31A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-31A>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

17-674732-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674732
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674732
    reference: chr 17
allele count: 1
allele frequency: 8.536356341659126e-6
allele num: 117146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-31A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-31A>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

17-674741-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674741
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674741
    reference: chr 17
allele count: 2
allele frequency: 1.732681844959629e-5
allele num: 115428
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-40A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-40A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6918
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4992
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

17-674743-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674743
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674743
    reference: chr 17
allele count: 77
allele frequency: 6.669091790954286e-4
allele num: 115458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-42C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-42C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4990
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
num of homozygotes: 3
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

17-674751-TAGAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 674751
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 674747
    reference: chr 17
allele count: 1
allele frequency: 8.701554097561825e-6
allele num: 114922
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*362-54_*362-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.452-54_452-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.446-54_446-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.380-54_380-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.407-54_407-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*303-54_*303-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*300-54_*300-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.407-54_407-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*430-54_*430-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.971-54_971-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*286-54_*286-51delTTCT
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: TAGAA
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-678971-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678971
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678971
    reference: chr 17
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+44T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+44T>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

17-678972-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678972
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678972
    reference: chr 17
allele count: 1
allele frequency: 8.319605983460623e-6
allele num: 120198
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+43C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+43C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

17-678973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678973
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678973
    reference: chr 17
allele count: 1
allele frequency: 8.318360284820657e-6
allele num: 120216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+42T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+42T>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

17-678974-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678974
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678974
    reference: chr 17
allele count: 2
allele frequency: 1.663422991832593e-5
allele num: 120234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+41A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+41A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

17-678976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678976
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678976
    reference: chr 17
allele count: 1
allele frequency: 8.323345318950592e-6
allele num: 120144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+39G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+39G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

17-678981-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678981
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678981
    reference: chr 17
allele count: 1
allele frequency: 8.313934153641504e-6
allele num: 120280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+34T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+34T>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS

17-678986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678986
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678986
    reference: chr 17
allele count: 4
allele frequency: 3.32242470555011e-5
allele num: 120394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+29C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+29C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS

17-678986-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678986
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678986
    reference: chr 17
allele count: 1
allele frequency: 8.306061763875276e-6
allele num: 120394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+29C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+29C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

17-678993-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678993
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678993
    reference: chr 17
allele count: 148
allele frequency: 1.227747084100675e-3
allele num: 120546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+22A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+22A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8547
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

17-678997-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 678997
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 678997
    reference: chr 17
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+18A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+18A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

17-679006-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679006
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679006
    reference: chr 17
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+9A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+9A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

17-679011-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679011
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679011
    reference: chr 17
allele count: 1
allele frequency: 8.261868173631421e-6
allele num: 121038
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+4A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+4A>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.406+4A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-679011-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679011
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679011
    reference: chr 17
allele count: 2
allele frequency: 1.652373634726284e-5
allele num: 121038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+4A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+4A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.406+4A>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-679012-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679012
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679012
    reference: chr 17
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.451+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.406+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.379+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.406+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*361+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*302+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*299+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.445+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.970+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*285+3A>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*429+3A>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.406+3A>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

17-679016-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679016
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679016
    reference: chr 17
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*298A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.969A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*284A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.405A>G
  hgvsp: ENST00000301329.6:c.405A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.405A>G
  hgvsp: ENST00000576419.1:c.405A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*428A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.444A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.378A>G
  hgvsp: ENST00000536578.1:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*360A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.450A>G
  hgvsp: ENST00000301328.5:c.450A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*301A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.405A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

17-679024-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679024
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679024
    reference: chr 17
allele count: 4
allele frequency: 3.298479400996141e-5
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.397C>T
  hgvsp: ENSP00000460634.1:p.Pro133Ser
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*420C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.442C>T
  hgvsp: ENSP00000301328.5:p.Pro148Ser
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.397C>T
  hgvsp: ENSP00000301329.6:p.Pro133Ser
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.961C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*352C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*276C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*293C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.370C>T
  hgvsp: ENSP00000444315.1:p.Pro124Ser
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*290C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.436C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro133Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-679026-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679026
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679026
    reference: chr 17
allele count: 4
allele frequency: 3.297663605335619e-5
allele num: 121298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.395T>C
  hgvsp: ENSP00000460634.1:p.Leu132Pro
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*418T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*291T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*274T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.959T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.368T>C
  hgvsp: ENSP00000444315.1:p.Leu123Pro
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.440T>C
  hgvsp: ENSP00000301328.5:p.Leu147Pro
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*350T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.395T>C
  hgvsp: ENSP00000301329.6:p.Leu132Pro
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*288T>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.434T>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu132Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

17-679033-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679033
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679033
    reference: chr 17
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.388C>T
  hgvsp: ENSP00000460634.1:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.427C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*411C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*267C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*284C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*343C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.361C>T
  hgvsp: ENSP00000444315.1:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.433C>T
  hgvsp: ENSP00000301328.5:p.Arg145Cys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*281C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.388C>T
  hgvsp: ENSP00000301329.6:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.952C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6421
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg130Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

17-679040-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679040
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679040
    reference: chr 17
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*274G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.945G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.420G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.426G>C
  hgvsp: ENSP00000301328.5:p.Leu142Phe
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*404G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.381G>C
  hgvsp: ENSP00000460634.1:p.Leu127Phe
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.354G>C
  hgvsp: ENSP00000444315.1:p.Leu118Phe
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*336G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*277G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*260G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.381G>C
  hgvsp: ENSP00000301329.6:p.Leu127Phe
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu127Phe
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

17-679046-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679046
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679046
    reference: chr 17
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.414C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.375C>G
  hgvsp: ENSP00000460634.1:p.Phe125Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.420C>G
  hgvsp: ENSP00000301328.5:p.Phe140Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*271C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.939C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*330C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.375C>G
  hgvsp: ENSP00000301329.6:p.Phe125Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.348C>G
  hgvsp: ENSP00000444315.1:p.Phe116Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*268C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*254C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*398C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe125Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/17-679048-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679048
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679048
    reference: chr 17
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*266T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*269T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.412T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.373T>G
  hgvsp: ENSP00000460634.1:p.Phe125Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.418T>G
  hgvsp: ENSP00000301328.5:p.Phe140Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*328T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*396T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.937T>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.373T>G
  hgvsp: ENSP00000301329.6:p.Phe125Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.346T>G
  hgvsp: ENSP00000444315.1:p.Phe116Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*252T>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe125Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-679050-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679050
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679050
    reference: chr 17
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.344A>G
  hgvsp: ENSP00000444315.1:p.Lys115Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.371A>G
  hgvsp: ENSP00000301329.6:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.416A>G
  hgvsp: ENSP00000301328.5:p.Lys139Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*250A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*326A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.371A>G
  hgvsp: ENSP00000460634.1:p.Lys124Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*267A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*394A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*264A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.410A>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.935A>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys124Arg
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

17-679057-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679057
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679057
    reference: chr 17
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.928G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.364G>C
  hgvsp: ENSP00000301329.6:p.Gly122Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*257G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.337G>C
  hgvsp: ENSP00000444315.1:p.Gly113Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*243G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.409G>C
  hgvsp: ENSP00000301328.5:p.Gly137Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*319G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*387G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.364G>C
  hgvsp: ENSP00000460634.1:p.Gly122Arg
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.403G>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*260G>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly122Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS

17-679059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679059
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679059
    reference: chr 17
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*317G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.362G>A
  hgvsp: ENSP00000301329.6:p.Gly121Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*385G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.407G>A
  hgvsp: ENSP00000301328.5:p.Gly136Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.335G>A
  hgvsp: ENSP00000444315.1:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*241G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.362G>A
  hgvsp: ENSP00000460634.1:p.Gly121Glu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.401G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*258G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*255G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.926G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly121Glu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-679062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679062
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679062
    reference: chr 17
allele count: 6
allele frequency: 4.942176534545814e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*314C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*382C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*238C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.359C>T
  hgvsp: ENSP00000301329.6:p.Pro120Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.332C>T
  hgvsp: ENSP00000444315.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*255C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*252C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.359C>T
  hgvsp: ENSP00000460634.1:p.Pro120Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.404C>T
  hgvsp: ENSP00000301328.5:p.Pro135Leu
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.923C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.398C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro120Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

17-679065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679065
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679065
    reference: chr 17
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*311C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.356C>T
  hgvsp: ENSP00000460634.1:p.Ala119Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.401C>T
  hgvsp: ENSP00000301328.5:p.Ala134Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.920C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*235C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.329C>T
  hgvsp: ENSP00000444315.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*379C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.356C>T
  hgvsp: ENSP00000301329.6:p.Ala119Val
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*252C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.395C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*249C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala119Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

17-679069-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679069
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679069
    reference: chr 17
allele count: 5
allele frequency: 4.11834475487612e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.391G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.352G>A
  hgvsp: ENSP00000460634.1:p.Glu118Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*245G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.916G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*375G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.325G>A
  hgvsp: ENSP00000444315.1:p.Glu109Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*307G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*231G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.397G>A
  hgvsp: ENSP00000301328.5:p.Glu133Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.352G>A
  hgvsp: ENSP00000301329.6:p.Glu118Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*248G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Glu118Lys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

17-679070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679070
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679070
    reference: chr 17
allele count: 14
allele frequency: 1.153117535623095e-4
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.915C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.396C>T
  hgvsp: ENST00000301328.5:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.324C>T
  hgvsp: ENST00000536578.1:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*247C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*374C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*306C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.390C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.351C>T
  hgvsp: ENST00000301329.6:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*230C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*244C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.351C>T
  hgvsp: ENST00000576419.1:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr117Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-679085-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679085
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679085
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*291A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.381A>C
  hgvsp: ENSP00000301328.5:p.Glu127Asp
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.375A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.336A>C
  hgvsp: ENSP00000460634.1:p.Glu112Asp
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*229A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.336A>C
  hgvsp: ENSP00000301329.6:p.Glu112Asp
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.309A>C
  hgvsp: ENSP00000444315.1:p.Glu103Asp
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*359A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.900A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*232A>C
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*215A>C
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu112Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

17-679089-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679089
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679089
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*228C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.332C>G
  hgvsp: ENSP00000301329.6:p.Ala111Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*211C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*355C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*287C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.377C>G
  hgvsp: ENSP00000301328.5:p.Ala126Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.371C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.305C>G
  hgvsp: ENSP00000444315.1:p.Ala102Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.332C>G
  hgvsp: ENSP00000460634.1:p.Ala111Gly
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*225C>G
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.896C>G
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala111Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-679096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679096
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679096
    reference: chr 17
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*280G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.370G>A
  hgvsp: ENSP00000301328.5:p.Glu124Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.298G>A
  hgvsp: ENSP00000444315.1:p.Glu100Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.325G>A
  hgvsp: ENSP00000301329.6:p.Glu109Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.325G>A
  hgvsp: ENSP00000460634.1:p.Glu109Lys
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*218G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*348G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.364G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*221G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.889G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*204G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu109Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-679097-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679097
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679097
    reference: chr 17
allele count: 8
allele frequency: 6.589568712727751e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*279G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*203G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*347G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*220G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*217G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.369G>A
  hgvsp: ENST00000301328.5:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.297G>A
  hgvsp: ENST00000536578.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.324G>A
  hgvsp: ENST00000301329.6:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.324G>A
  hgvsp: ENST00000576419.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.888G>A
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.363G>A
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr108Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

17-679098-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 679098
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 679098
    reference: chr 17
allele count: 14
allele frequency: 1.15315552773339e-4
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461837
  ensembl transcript: ENST00000572220
  gene symbol: GLOD4
  hgvsc: ENST00000572220.1:c.*202C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301329
  ensembl transcript: ENST00000301329
  gene symbol: GLOD4
  hgvsc: ENST00000301329.6:c.323C>T
  hgvsp: ENSP00000301329.6:p.Thr108Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000460634
  ensembl transcript: ENST00000576419
  gene symbol: GLOD4
  hgvsc: ENST00000576419.1:c.323C>T
  hgvsp: ENSP00000460634.1:p.Thr108Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459446
  ensembl transcript: ENST00000574554
  gene symbol: GLOD4
  hgvsc: ENST00000574554.1:c.*346C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000576239
  gene symbol: GLOD4
  hgvsc: ENST00000576239.1:n.362C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000301328
  ensembl transcript: ENST00000301328
  gene symbol: GLOD4
  hgvsc: ENST00000301328.5:c.368C>T
  hgvsp: ENSP00000301328.5:p.Thr123Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000167699
  ensembl transcript: ENST00000571073
  gene symbol: GLOD4
  hgvsc: ENST00000571073.1:n.887C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000461829
  ensembl transcript: ENST00000575851
  gene symbol: GLOD4
  hgvsc: ENST00000575851.1:c.*278C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000444315
  ensembl transcript: ENST00000536578
  gene symbol: GLOD4
  hgvsc: ENST00000536578.1:c.296C>T
  hgvsp: ENSP00000444315.1:p.Thr99Met
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000459557
  ensembl transcript: ENST00000574581
  gene symbol: GLOD4
  hgvsc: ENST00000574581.1:c.*219C>T
  variant of: http://identifiers.org/hgnc/14111
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167699
  ensembl protein: ENSP00000458796
  ensembl transcript: ENST00000575790
  gene symbol: GLOD4
  hgvsc: ENST00000575790.1:c.*216C>T
  variant of: http://identifiers.org/hgnc/14111
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.75e1
  variant carriers: 1
hgvs: p.Thr108Met
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 355
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7191
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3126
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 7592
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30794
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11180
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.005284650492433e-5
allele num: 66608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.212e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.372e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.01e-1

DP
type: SiteQuality
SIO_000300: 2.891684e6

GenotypeDepth
all individuals: 898
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7192
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1168
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4883
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30792
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.341e0

DP
type: SiteQuality
SIO_000300: 2.892324e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.056e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.174e0

VQSLOD
type: SiteQuality
SIO_000300: 4.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeDepth
all individuals: 356
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 8027
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3120
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30791
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.016e1

VQSLOD
type: SiteQuality
SIO_000300: -2.083e0

DP
type: SiteQuality
SIO_000300: 2.893714e6

MQ
type: SiteQuality
SIO_000300: 5.827e1

FS
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.044e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.94e-1

GenotypeDepth
all individuals: 3655
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3121
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1884
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 898
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30790
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4325
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000210014701029e-5
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.893917e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.99e-1

VQSLOD
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FS
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SIO_000300: 7.476e0

MQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 52

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.199160167966407e-4
allele num: 66680
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Other
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South Asian
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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DP
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VQSLOD
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QD
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BaseQRankSum
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MQ
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SIO_000300: 5.971e1

ReadPosRankSum
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SIO_000300: 4.78e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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South Asian
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African
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Other
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European (Non-Finnish)
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European (Finnish)
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FS
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MQ
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SIO_000300: 5.962e1

ReadPosRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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Other
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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QD
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele num: 11576
num of homozygotes: 0

East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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ClippingRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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East Asian
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Other
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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African
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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South Asian
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East Asian
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allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.892028e6

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.419999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 1.101e0

QD
type: SiteQuality
SIO_000300: 1.315e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
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GenotypeQuality
all individuals: 3333
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30766
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11729
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.775e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.891902e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.912e0

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

GenotypeDepth
all individuals: 8052
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1962
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.891902e6

QD
type: SiteQuality
SIO_000300: 1.192e1

FS
type: SiteQuality
SIO_000300: 1.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.912e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 3272
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 4325
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30764
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 3359
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.891139e6

FS
type: SiteQuality
SIO_000300: 9.419999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

GenotypeQuality
all individuals: 201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 11614
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 3355
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 30762
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 4313
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1805
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variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218472036066772e-4
allele num: 16414
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 2.889818e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 1.183e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.69e0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e-1

QD
type: SiteQuality
SIO_000300: 1.641e1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 11254
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30756
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.187e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

FS
type: SiteQuality
SIO_000300: 4.513e0

VQSLOD
type: SiteQuality
SIO_000300: 8.129999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.883992e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11119
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730403183941858e-4
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

FS
type: SiteQuality
SIO_000300: 1.973e0

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 2.88178e6

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.324500232450023e-4
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.45e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 1.396e0

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e-1

DP
type: SiteQuality
SIO_000300: 2.878719e6

QD
type: SiteQuality
SIO_000300: 1.403e1

GenotypeDepth
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 13

Latino
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allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 13
allele frequency: 1.27826941986234e-3
allele num: 10170
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.02e0

DP
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ClippingRankSum
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SIO_000300: 9.6e-2

MQ
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VQSLOD
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MQRankSum
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SIO_000300: 2.92e-1

FS
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
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SIO_000300: 4.48e-1

QD
type: SiteQuality
SIO_000300: 1.425e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15656
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.021148036253776e-5
allele num: 66200
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

QD
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InbreedingCoeff
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SIO_000300: 8.0e-4

ClippingRankSum
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FS
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MQ
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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SIO_000300: 4.48e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65974
num of homozygotes: 0

East Asian
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allele num: 8562
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Latino
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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BaseQRankSum
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SIO_000300: -6.051e0

InbreedingCoeff
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SIO_000300: 3.4e-3

VQSLOD
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ClippingRankSum
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FS
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MQRankSum
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DP
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.68e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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East Asian
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allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65970
num of homozygotes: 0

South Asian
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.74e-1

DP
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ClippingRankSum
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SIO_000300: 9.23e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.169043722235212e-4
allele num: 8554
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European (Non-Finnish)
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South Asian
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African
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Latino
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MQ
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
type: Population
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
type: Population
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Latino
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African
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 65628
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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FS
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MQ
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ClippingRankSum
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DP
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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African
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allele frequency: 0.0e0
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East Asian
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Latino
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allele num: 11480
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European (Finnish)
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VQSLOD
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BaseQRankSum
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DP
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MQ
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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Latino
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East Asian
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65556
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East Asian
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European (Finnish)
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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MQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11468
num of homozygotes: 0

Other
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African
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European (Non-Finnish)
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allele num: 65450
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South Asian
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European (Finnish)
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East Asian
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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allele num: 65380
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European (Finnish)
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Other
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African
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Latino
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FS
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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Other
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Latino
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele num: 64826
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.639e1

DP
type: SiteQuality
SIO_000300: 2.750253e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

GenotypeQuality
all individuals: 2986
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 675
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GenotypeQuality
all individuals: 3313
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3131
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1778
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30769
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 563
bin: 5.25e1
variant carriers: 2

Other
type: Population
allele count: 1
allele frequency: 1.182033096926714e-3
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.751969193068441e-5
allele num: 11426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

South Asian
type: Population
allele count: 75
allele frequency: 5.496116077971566e-3
allele num: 13646
num of homozygotes: 3

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 2.748856e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

QD
type: SiteQuality
SIO_000300: 1.42e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.122e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

GenotypeQuality
all individuals: 2971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 897
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variant carriers: 0

GenotypeQuality
all individuals: 3232
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variant carriers: 0

GenotypeQuality
all individuals: 3312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
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GenotypeQuality
all individuals: 1376
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variant carriers: 0

GenotypeQuality
all individuals: 932
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GenotypeQuality
all individuals: 1106
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variant carriers: 0

GenotypeQuality
all individuals: 643
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1543
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variant carriers: 0

GenotypeQuality
all individuals: 1181
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variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30722
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64684
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.034554107179805e-4
allele num: 9666
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

QD
type: SiteQuality
SIO_000300: 1.519e1

MQ
type: SiteQuality
SIO_000300: 5.478e1

MQRankSum
type: SiteQuality
SIO_000300: -1.787e0

DP
type: SiteQuality
SIO_000300: 2.740148e6

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.222e0

GenotypeQuality
all individuals: 599
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 33008
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variant carriers: 1

GenotypeQuality
all individuals: 736
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 3796
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 439
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variant carriers: 0

GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
all individuals: 5477
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 800
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variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
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variant carriers: 0

GenotypeQuality
all individuals: 1775
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variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2116
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

QD
type: SiteQuality
SIO_000300: 1.351e1

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.664966e6

GenotypeQuality
all individuals: 33009
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 793
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 3590
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 1777
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variant carriers: 0

GenotypeQuality
all individuals: 709
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variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 3274
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variant carriers: 0

GenotypeQuality
all individuals: 417
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variant carriers: 0

GenotypeQuality
all individuals: 3795
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variant carriers: 0

GenotypeQuality
all individuals: 122
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variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.985e0

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.338e0

DP
type: SiteQuality
SIO_000300: 2.665789e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e-1

QD
type: SiteQuality
SIO_000300: 1.699e1

FS
type: SiteQuality
SIO_000300: 1.887e0

MQ
type: SiteQuality
SIO_000300: 5.826e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

GenotypeQuality
all individuals: 3283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 513
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 3795
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 715
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variant carriers: 0

GenotypeQuality
all individuals: 447
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variant carriers: 0

GenotypeQuality
all individuals: 3334
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variant carriers: 0

GenotypeQuality
all individuals: 717
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variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33009
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5829
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.92e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

FS
type: SiteQuality
SIO_000300: 1.141e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

DP
type: SiteQuality
SIO_000300: 2.666461e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.95e-1

GenotypeQuality
all individuals: 719
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3593
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 3291
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33009
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5967
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GenotypeQuality
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GenotypeQuality
all individuals: 702
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GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.26806999746386e-4
allele num: 15772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.667185e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQRankSum
type: SiteQuality
SIO_000300: -8.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.881e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.51e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

GenotypeQuality
all individuals: 688
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3796
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6150
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.06e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 2.669179e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33012
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.125e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.067e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.83e-1

QD
type: SiteQuality
SIO_000300: 2.745e1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.674103e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.463e0

FS
type: SiteQuality
SIO_000300: 2.441e0

GenotypeQuality
all individuals: 338
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3798
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33015
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.891287586738628e-4
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505661286437003e-5
allele num: 66416
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.427e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

DP
type: SiteQuality
SIO_000300: 2.6796e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

FS
type: SiteQuality
SIO_000300: 3.564e0

GenotypeQuality
all individuals: 436
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 3340
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
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variant carriers: 0

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 3798
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variant carriers: 0

GenotypeQuality
all individuals: 33015
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 515
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variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.301991429291656e-5
allele num: 15868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

FS
type: SiteQuality
SIO_000300: 3.564e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 1.427e1

DP
type: SiteQuality
SIO_000300: 2.6796e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7806
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3597
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33056
bin: 9.75e1
variant carriers: 147

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 34
allele frequency: 2.127659574468085e-3
allele num: 15980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 111
allele frequency: 1.670378619153675e-3
allele num: 66452
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

DP
type: SiteQuality
SIO_000300: 2.690069e6

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

QD
type: SiteQuality
SIO_000300: 1.357e1

FS
type: SiteQuality
SIO_000300: 6.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32995
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3417
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 87
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variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3799
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8196
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.171e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.48e-2

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.388e0

QD
type: SiteQuality
SIO_000300: 9.9e-1

DP
type: SiteQuality
SIO_000300: 2.6911e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

FS
type: SiteQuality
SIO_000300: 3.342e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 284
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 8700
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3799
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variant carriers: 0

GenotypeQuality
all individuals: 1804
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3601
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.162188809465122e-5
allele num: 16228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.85e0

QD
type: SiteQuality
SIO_000300: 1.616e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.072e0

VQSLOD
type: SiteQuality
SIO_000300: -9.34e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.697916e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

GenotypeDepth
all individuals: 979
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8560
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32994
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1809
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.700655e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

QD
type: SiteQuality
SIO_000300: 1.326e1

MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
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SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: 8.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

GenotypeDepth
all individuals: 1635
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 655
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variant carriers: 0

GenotypeDepth
all individuals: 4294
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32994
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1809
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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Latino
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African
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European (Finnish)
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 3.00336376741951e-5
allele num: 66592
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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MQ
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FS
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DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10394
num of homozygotes: 0

East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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South Asian
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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African
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Other
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East Asian
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Latino
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Other
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African
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South Asian
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European (Finnish)
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East Asian
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MQ
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BaseQRankSum
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QD
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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European (Non-Finnish)
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Other
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Latino
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South Asian
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East Asian
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11578
num of homozygotes: 0

African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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South Asian
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VQSLOD
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BaseQRankSum
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FS
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele num: 11578
num of homozygotes: 0

African
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South Asian
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ReadPosRankSum
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SIO_000300: -5.6e-2

ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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MQ
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SIO_000300: 5.93e1

QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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allele num: 16508
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European (Finnish)
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Other
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Latino
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East Asian
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FS
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MQRankSum
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DP
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VQSLOD
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66728
num of homozygotes: 0

African
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Other
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South Asian
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East Asian
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European (Finnish)
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MQRankSum
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SIO_000300: 1.01e0

InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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QD
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ClippingRankSum
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MQ
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FS
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66734
num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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Other
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQ
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16510
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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Other
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European (Non-Finnish)
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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Other
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African
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South Asian
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European (Finnish)
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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MQ
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SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e0

DP
type: SiteQuality
SIO_000300: 2.708268e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

GenotypeDepth
all individuals: 8559
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32990
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9406
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198681450404555e-4
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

QD
type: SiteQuality
SIO_000300: 1.348e1

DP
type: SiteQuality
SIO_000300: 2.708749e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

GenotypeDepth
all individuals: 316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9413
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32984
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.458e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.128e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 2.707987e6

GenotypeDepth
all individuals: 651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9413
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3601
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.855e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
SIO_000300: 2.707983e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.426e1

GenotypeDepth
all individuals: 214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1815
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9407
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.249e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.01e1

DP
type: SiteQuality
SIO_000300: 2.707906e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

GenotypeDepth
all individuals: 1074
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 9409
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32984
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3381
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.883506343713956e-4
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

QD
type: SiteQuality
SIO_000300: 1.335e1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.70842e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

GenotypeDepth
all individuals: 214
bin: 9.25e1
variant carriers: 0