11-71155138-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155138
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155138
    reference: chr 11
allele count: 5
allele frequency: 4.346087651895764e-5
allele num: 115046
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.222C>G
  hgvsp: ENSP00000347717.3:p.Asp74Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.222C>G
  hgvsp: ENSP00000435668.1:p.Asp74Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.162C>G
  hgvsp: ENSP00000435058.1:p.Asp54Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.126C>G
  hgvsp: ENSP00000435047.1:p.Asp42Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.222C>G
  hgvsp: ENSP00000435707.1:p.Asp74Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.222C>G
  hgvsp: ENSP00000436007.1:p.Asp74Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.222C>G
  hgvsp: ENSP00000432589.1:p.Asp74Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.222C>G
  hgvsp: ENSP00000384739.2:p.Asp74Glu
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2903
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2386
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Asp74Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

11-71155140-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155140
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155140
    reference: chr 11
allele count: 4
allele frequency: 3.473186996387885e-5
allele num: 115168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.220G>A
  hgvsp: ENSP00000436007.1:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.220G>A
  hgvsp: ENSP00000435668.1:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.220G>A
  hgvsp: ENSP00000347717.3:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.220G>A
  hgvsp: ENSP00000435707.1:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.160G>A
  hgvsp: ENSP00000435058.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.220G>A
  hgvsp: ENSP00000432589.1:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.220G>A
  hgvsp: ENSP00000384739.2:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.124G>A
  hgvsp: ENSP00000435047.1:p.Asp42Asn
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6162
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24706
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10509
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2385
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp74Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

11-71155150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155150
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155150
    reference: chr 11
allele count: 1
allele frequency: 8.740953113527499e-6
allele num: 114404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.114C>T
  hgvsp: ENST00000527316.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.210C>T
  hgvsp: ENST00000526780.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.210C>T
  hgvsp: ENST00000407721.2:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.210C>T
  hgvsp: ENST00000525346.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.210C>T
  hgvsp: ENST00000527452.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.210C>T
  hgvsp: ENST00000531364.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.210C>T
  hgvsp: ENST00000355527.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.150C>T
  hgvsp: ENST00000529990.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4942
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly70Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-71155152-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155152
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155152
    reference: chr 11
allele count: 1
allele frequency: 8.744316194473592e-6
allele num: 114360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.208G>C
  hgvsp: ENSP00000384739.2:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.208G>C
  hgvsp: ENSP00000435668.1:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.148G>C
  hgvsp: ENSP00000435058.1:p.Gly50Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.208G>C
  hgvsp: ENSP00000347717.3:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.208G>C
  hgvsp: ENSP00000436007.1:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.208G>C
  hgvsp: ENSP00000435707.1:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.112G>C
  hgvsp: ENSP00000435047.1:p.Gly38Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.208G>C
  hgvsp: ENSP00000432589.1:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22524
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly70Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

11-71155152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155152
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155152
    reference: chr 11
allele count: 50
allele frequency: 4.372158097236796e-4
allele num: 114360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.208G>A
  hgvsp: ENSP00000435707.1:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.208G>A
  hgvsp: ENSP00000436007.1:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.148G>A
  hgvsp: ENSP00000435058.1:p.Gly50Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.208G>A
  hgvsp: ENSP00000432589.1:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.208G>A
  hgvsp: ENSP00000435668.1:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.208G>A
  hgvsp: ENSP00000384739.2:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.112G>A
  hgvsp: ENSP00000435047.1:p.Gly38Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.208G>A
  hgvsp: ENSP00000347717.3:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9976
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22524
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4896
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly70Ser
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

11-71155153-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155153
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155153
    reference: chr 11
allele count: 102314
allele frequency: 8.754963033953997e-1
allele num: 116864
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.111T>C
  hgvsp: ENST00000527316.1:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.207T>C
  hgvsp: ENST00000355527.3:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.147T>C
  hgvsp: ENST00000529990.1:c.147T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.207T>C
  hgvsp: ENST00000526780.1:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.207T>C
  hgvsp: ENST00000527452.1:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.207T>C
  hgvsp: ENST00000531364.1:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.207T>C
  hgvsp: ENST00000525346.1:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.207T>C
  hgvsp: ENST00000407721.2:c.207T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.25e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 2.25e1
  variant carriers: 11865
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 992
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 7.5e0
  variant carriers: 1294
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.25e1
  variant carriers: 1942
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 2.75e1
  variant carriers: 9310
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 820
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 1.25e1
  variant carriers: 5802
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.25e1
  variant carriers: 5616
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.25e1
  variant carriers: 687
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 1118
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.75e1
  variant carriers: 1373
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 600
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 6.25e1
  variant carriers: 845
genotype depth: GenotypeDepth
  all individuals: 10662
  bin: 1.75e1
  variant carriers: 10475
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 488
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 3.75e1
  variant carriers: 3145
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 9.75e1
  variant carriers: 1607
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 8.25e1
  variant carriers: 491
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 7.75e1
  variant carriers: 3322
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 3.25e1
  variant carriers: 1477
genotype quality: GenotypeQuality
  all individuals: 3813
  bin: 6.75e1
  variant carriers: 3713
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 9.25e1
  variant carriers: 2096
hgvs: p.Thr69Thr
num of homozygotes: 45276
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-71155161-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155161
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155161
    reference: chr 11
allele count: 76
allele frequency: 6.836622708382059e-4
allele num: 111166
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.199G>A
  hgvsp: ENSP00000435668.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.199G>A
  hgvsp: ENSP00000435707.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.199G>A
  hgvsp: ENSP00000384739.2:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.103G>A
  hgvsp: ENSP00000435047.1:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.199G>A
  hgvsp: ENSP00000432589.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.199G>A
  hgvsp: ENSP00000347717.3:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.199G>A
  hgvsp: ENSP00000436007.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.139G>A
  hgvsp: ENSP00000435058.1:p.Ala47Thr
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12633
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 9106
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10576
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4463
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala67Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ

11-71155162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155162
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155162
    reference: chr 11
allele count: 3
allele frequency: 2.703189763921427e-5
allele num: 110980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.102C>T
  hgvsp: ENST00000527316.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.198C>T
  hgvsp: ENST00000525346.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.138C>T
  hgvsp: ENST00000529990.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.198C>T
  hgvsp: ENST00000531364.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.198C>T
  hgvsp: ENST00000527452.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.198C>T
  hgvsp: ENST00000355527.3:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.198C>T
  hgvsp: ENST00000526780.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.198C>T
  hgvsp: ENST00000407721.2:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12501
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys66Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

11-71155171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155171
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155171
    reference: chr 11
allele count: 62638
allele frequency: 5.71848524685948e-1
allele num: 109536
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.129G>A
  hgvsp: ENST00000529990.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.189G>A
  hgvsp: ENST00000525346.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-6G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.189G>A
  hgvsp: ENST00000526780.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.189G>A
  hgvsp: ENST00000355527.3:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.189G>A
  hgvsp: ENST00000531364.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.189G>A
  hgvsp: ENST00000527452.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.189G>A
  hgvsp: ENST00000407721.2:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9209
  bin: 1.25e1
  variant carriers: 6983
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 3.25e1
  variant carriers: 3123
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 2.25e1
  variant carriers: 9453
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 7.5e0
  variant carriers: 1927
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 601
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 895
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 835
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 3.75e1
  variant carriers: 1615
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 708
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 1.75e1
  variant carriers: 10500
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.75e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.25e1
  variant carriers: 408
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 522
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 2.75e1
  variant carriers: 5833
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 350
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 4.25e1
  variant carriers: 1077
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 178
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 9.25e1
  variant carriers: 822
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 2.75e1
  variant carriers: 482
genotype quality: GenotypeQuality
  all individuals: 3991
  bin: 2.25e1
  variant carriers: 620
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 7.5e0
  variant carriers: 193
hgvs: c.99-6G>A
num of homozygotes: 19162
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

11-71155174-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155174
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155174
    reference: chr 11
allele count: 1
allele frequency: 1.038658883649432e-5
allele num: 96278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-9C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.186C>T
  hgvsp: ENST00000525346.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.186C>T
  hgvsp: ENST00000526780.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.186C>T
  hgvsp: ENST00000527452.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.126C>T
  hgvsp: ENST00000529990.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.186C>T
  hgvsp: ENST00000407721.2:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.186C>T
  hgvsp: ENST00000531364.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.186C>T
  hgvsp: ENST00000355527.3:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp62Asp
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-71155175-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155175
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155175
    reference: chr 11
allele count: 1
allele frequency: 1.046331561545222e-5
allele num: 95572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.185A>T
  hgvsp: ENSP00000432589.1:p.Asp62Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.185A>T
  hgvsp: ENSP00000435707.1:p.Asp62Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.185A>T
  hgvsp: ENSP00000435668.1:p.Asp62Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.185A>T
  hgvsp: ENSP00000347717.3:p.Asp62Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.125A>T
  hgvsp: ENSP00000435058.1:p.Asp42Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.185A>T
  hgvsp: ENSP00000436007.1:p.Asp62Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.185A>T
  hgvsp: ENSP00000384739.2:p.Asp62Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-10A>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10814
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp62Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-71155178-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155178
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155178
    reference: chr 11
allele count: 26
allele frequency: 2.878207540903757e-4
allele num: 90334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.182G>T
  hgvsp: ENSP00000435707.1:p.Cys61Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.182G>T
  hgvsp: ENSP00000435668.1:p.Cys61Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.182G>T
  hgvsp: ENSP00000436007.1:p.Cys61Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.182G>T
  hgvsp: ENSP00000347717.3:p.Cys61Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.122G>T
  hgvsp: ENSP00000435058.1:p.Cys41Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.182G>T
  hgvsp: ENSP00000384739.2:p.Cys61Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-13G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.182G>T
  hgvsp: ENSP00000432589.1:p.Cys61Phe
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11018
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13744
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12171
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6468
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 10874
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2385
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2134
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys61Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-71155188-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155188
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155188
    reference: chr 11
allele count: 1
allele frequency: 1.088020890001088e-5
allele num: 91910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.172A>T
  hgvsp: ENSP00000432589.1:p.Ile58Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.172A>T
  hgvsp: ENSP00000347717.3:p.Ile58Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.172A>T
  hgvsp: ENSP00000384739.2:p.Ile58Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-23A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.112A>T
  hgvsp: ENSP00000435058.1:p.Ile38Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.172A>T
  hgvsp: ENSP00000436007.1:p.Ile58Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.172A>T
  hgvsp: ENSP00000435707.1:p.Ile58Phe
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.172A>T
  hgvsp: ENSP00000435668.1:p.Ile58Phe
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11245
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile58Phe
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-71155195-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155195
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155195
    reference: chr 11
allele count: 1
allele frequency: 1.124454639499843e-5
allele num: 88932
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.165C>G
  hgvsp: ENSP00000347717.3:p.Tyr55Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.165C>G
  hgvsp: ENSP00000435707.1:p.Tyr55Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.165C>G
  hgvsp: ENSP00000436007.1:p.Tyr55Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.165C>G
  hgvsp: ENSP00000384739.2:p.Tyr55Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.165C>G
  hgvsp: ENSP00000432589.1:p.Tyr55Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.105C>G
  hgvsp: ENSP00000435058.1:p.Tyr35Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.165C>G
  hgvsp: ENSP00000435668.1:p.Tyr55Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-30C>G
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20915
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Tyr55Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

11-71155198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155198
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155198
    reference: chr 11
allele count: 5
allele frequency: 5.724360588922218e-5
allele num: 87346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.162C>T
  hgvsp: ENST00000526780.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-33C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.162C>T
  hgvsp: ENST00000407721.2:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.162C>T
  hgvsp: ENST00000525346.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.162C>T
  hgvsp: ENST00000355527.3:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.102C>T
  hgvsp: ENST00000529990.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.162C>T
  hgvsp: ENST00000531364.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.162C>T
  hgvsp: ENST00000527452.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10186
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val54Val
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

11-71155200-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155200
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155200
    reference: chr 11
allele count: 2
allele frequency: 2.310375898158631e-5
allele num: 86566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.100G>A
  hgvsp: ENSP00000435058.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.160G>A
  hgvsp: ENSP00000347717.3:p.Val54Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.160G>A
  hgvsp: ENSP00000436007.1:p.Val54Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.160G>A
  hgvsp: ENSP00000435707.1:p.Val54Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.160G>A
  hgvsp: ENSP00000384739.2:p.Val54Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.160G>A
  hgvsp: ENSP00000432589.1:p.Val54Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-35G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.160G>A
  hgvsp: ENSP00000435668.1:p.Val54Ile
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12584
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25032
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val54Ile
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

11-71155201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155201
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155201
    reference: chr 11
allele count: 6
allele frequency: 7.048044167743451e-5
allele num: 85130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.159C>T
  hgvsp: ENST00000527452.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.159C>T
  hgvsp: ENST00000355527.3:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.159C>T
  hgvsp: ENST00000525346.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-36C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.159C>T
  hgvsp: ENST00000526780.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.159C>T
  hgvsp: ENST00000407721.2:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.99C>T
  hgvsp: ENST00000529990.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.159C>T
  hgvsp: ENST00000531364.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13067
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25820
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile53Ile
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

11-71155204-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155204
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155204
    reference: chr 11
allele count: 1
allele frequency: 1.203977943124082e-5
allele num: 83058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.156C>G
  hgvsp: ENSP00000432589.1:p.Phe52Leu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.156C>G
  hgvsp: ENSP00000435668.1:p.Phe52Leu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-39C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.156C>G
  hgvsp: ENSP00000347717.3:p.Phe52Leu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.156C>G
  hgvsp: ENSP00000436007.1:p.Phe52Leu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.156C>G
  hgvsp: ENSP00000435707.1:p.Phe52Leu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.96C>G
  hgvsp: ENSP00000435058.1:p.Phe32Leu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.156C>G
  hgvsp: ENSP00000384739.2:p.Phe52Leu
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27112
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe52Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

11-71155207-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155207
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155207
    reference: chr 11
allele count: 1
allele frequency: 1.217967455909578e-5
allele num: 82104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.93C>T
  hgvsp: ENST00000529990.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.153C>T
  hgvsp: ENST00000531364.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.153C>T
  hgvsp: ENST00000407721.2:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.153C>T
  hgvsp: ENST00000527452.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.153C>T
  hgvsp: ENST00000525346.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.153C>T
  hgvsp: ENST00000355527.3:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-42C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.153C>T
  hgvsp: ENST00000526780.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13835
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17407
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro51Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

11-71155212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155212
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155212
    reference: chr 11
allele count: 4
allele frequency: 5.083884087442806e-5
allele num: 78680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.148G>A
  hgvsp: ENSP00000384739.2:p.Ala50Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.148G>A
  hgvsp: ENSP00000435668.1:p.Ala50Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.148G>A
  hgvsp: ENSP00000347717.3:p.Ala50Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-47G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.148G>A
  hgvsp: ENSP00000432589.1:p.Ala50Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.88G>A
  hgvsp: ENSP00000435058.1:p.Ala30Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.148G>A
  hgvsp: ENSP00000435707.1:p.Ala50Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.148G>A
  hgvsp: ENSP00000436007.1:p.Ala50Thr
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19436
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14486
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala50Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

11-71155213-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155213
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155213
    reference: chr 11
allele count: 2
allele frequency: 2.568515141396759e-5
allele num: 77866
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.147C>T
  hgvsp: ENST00000355527.3:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.147C>T
  hgvsp: ENST00000527452.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.87C>T
  hgvsp: ENST00000529990.1:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.147C>T
  hgvsp: ENST00000407721.2:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.147C>T
  hgvsp: ENST00000526780.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.147C>T
  hgvsp: ENST00000531364.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.147C>T
  hgvsp: ENST00000525346.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-48C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14688
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe49Phe
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

11-71155221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155221
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155221
    reference: chr 11
allele count: 10
allele frequency: 1.371102640743686e-4
allele num: 72934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.139C>T
  hgvsp: ENST00000527452.1:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.79C>T
  hgvsp: ENST00000529990.1:c.79C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.139C>T
  hgvsp: ENST00000355527.3:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.139C>T
  hgvsp: ENST00000525346.1:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.139C>T
  hgvsp: ENST00000526780.1:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.139C>T
  hgvsp: ENST00000407721.2:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.139C>T
  hgvsp: ENST00000531364.1:c.139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-56C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16054
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu47Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-71155223-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155223
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155223
    reference: chr 11
allele count: 2
allele frequency: 2.771618625277162e-5
allele num: 72160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.137T>G
  hgvsp: ENSP00000435707.1:p.Leu46Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.137T>G
  hgvsp: ENSP00000436007.1:p.Leu46Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.137T>G
  hgvsp: ENSP00000432589.1:p.Leu46Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.137T>G
  hgvsp: ENSP00000384739.2:p.Leu46Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-58T>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.137T>G
  hgvsp: ENSP00000347717.3:p.Leu46Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.137T>G
  hgvsp: ENSP00000435668.1:p.Leu46Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.77T>G
  hgvsp: ENSP00000435058.1:p.Leu26Arg
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16168
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu46Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

11-71155229-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155229
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155229
    reference: chr 11
allele count: 4
allele frequency: 5.953798523457966e-5
allele num: 67184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.131T>C
  hgvsp: ENSP00000384739.2:p.Ile44Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.131T>C
  hgvsp: ENSP00000436007.1:p.Ile44Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.131T>C
  hgvsp: ENSP00000435707.1:p.Ile44Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.131T>C
  hgvsp: ENSP00000435668.1:p.Ile44Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.131T>C
  hgvsp: ENSP00000432589.1:p.Ile44Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.71T>C
  hgvsp: ENSP00000435058.1:p.Ile24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-64T>C
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.131T>C
  hgvsp: ENSP00000347717.3:p.Ile44Thr
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22725
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16675
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9088
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33766
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile44Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

11-71155233-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155233
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155233
    reference: chr 11
allele count: 13
allele frequency: 2.045697740290804e-4
allele num: 63548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.127G>A
  hgvsp: ENSP00000384739.2:p.Val43Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.127G>A
  hgvsp: ENSP00000435707.1:p.Val43Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.127G>A
  hgvsp: ENSP00000435668.1:p.Val43Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.67G>A
  hgvsp: ENSP00000435058.1:p.Val23Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.127G>A
  hgvsp: ENSP00000436007.1:p.Val43Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.127G>A
  hgvsp: ENSP00000347717.3:p.Val43Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-68G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.127G>A
  hgvsp: ENSP00000432589.1:p.Val43Ile
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16528
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23248
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val43Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

11-71155234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155234
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155234
    reference: chr 11
allele count: 203
allele frequency: 3.273348813209494e-3
allele num: 62016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.126C>T
  hgvsp: ENST00000531364.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-69C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.126C>T
  hgvsp: ENST00000407721.2:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.126C>T
  hgvsp: ENST00000525346.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.126C>T
  hgvsp: ENST00000526780.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.66C>T
  hgvsp: ENST00000529990.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.126C>T
  hgvsp: ENST00000355527.3:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.126C>T
  hgvsp: ENST00000527452.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23551
  bin: 7.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16342
  bin: 1.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser42Ser
num of homozygotes: 2
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/11-71155237-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155237
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155237
    reference: chr 11
allele count: 2
allele frequency: 3.307643965203585e-5
allele num: 60466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.123G>T
  hgvsp: ENST00000527452.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.123G>T
  hgvsp: ENST00000526780.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.123G>T
  hgvsp: ENST00000525346.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.123G>T
  hgvsp: ENST00000531364.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-72G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.123G>T
  hgvsp: ENST00000407721.2:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.123G>T
  hgvsp: ENST00000355527.3:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.63G>T
  hgvsp: ENST00000529990.1:c.63G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7432
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala41Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-71155237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155237
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155237
    reference: chr 11
allele count: 5
allele frequency: 8.269109913008963e-5
allele num: 60466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.123G>A
  hgvsp: ENST00000407721.2:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.63G>A
  hgvsp: ENST00000529990.1:c.63G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.123G>A
  hgvsp: ENST00000525346.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.123G>A
  hgvsp: ENST00000526780.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.123G>A
  hgvsp: ENST00000355527.3:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.123G>A
  hgvsp: ENST00000531364.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.123G>A
  hgvsp: ENST00000527452.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-72G>A
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16035
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23944
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33944
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala41Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-71155238-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155238
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155238
    reference: chr 11
allele count: 4
allele frequency: 6.736955569778018e-5
allele num: 59374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.122C>T
  hgvsp: ENSP00000384739.2:p.Ala41Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.62C>T
  hgvsp: ENSP00000435058.1:p.Ala21Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-73C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.122C>T
  hgvsp: ENSP00000435707.1:p.Ala41Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.122C>T
  hgvsp: ENSP00000347717.3:p.Ala41Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.122C>T
  hgvsp: ENSP00000435668.1:p.Ala41Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.122C>T
  hgvsp: ENSP00000436007.1:p.Ala41Val
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.122C>T
  hgvsp: ENSP00000432589.1:p.Ala41Val
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24096
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15947
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6542
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala41Val
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

11-71155242-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155242
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155242
    reference: chr 11
allele count: 2
allele frequency: 3.593244699964068e-5
allele num: 55660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.118C>T
  hgvsp: ENST00000527452.1:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.118C>T
  hgvsp: ENST00000525346.1:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.118C>T
  hgvsp: ENST00000355527.3:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.118C>T
  hgvsp: ENST00000407721.2:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.58C>T
  hgvsp: ENST00000529990.1:c.58C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.118C>T
  hgvsp: ENST00000526780.1:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-77C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.118C>T
  hgvsp: ENST00000531364.1:c.118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu40Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

11-71155249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155249
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155249
    reference: chr 11
allele count: 3
allele frequency: 5.678161789756596e-5
allele num: 52834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-84G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.111G>A
  hgvsp: ENSP00000432589.1:p.Trp37Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.51G>A
  hgvsp: ENSP00000435058.1:p.Trp17Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.111G>A
  hgvsp: ENSP00000384739.2:p.Trp37Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.111G>A
  hgvsp: ENSP00000436007.1:p.Trp37Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.111G>A
  hgvsp: ENSP00000347717.3:p.Trp37Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.111G>A
  hgvsp: ENSP00000435707.1:p.Trp37Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.111G>A
  hgvsp: ENSP00000435668.1:p.Trp37Ter
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14307
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32926
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Trp37Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

11-71155265-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155265
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155265
    reference: chr 11
allele count: 628
allele frequency: 1.696471986601113e-2
allele num: 37018
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-4G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-4G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-4G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-4G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-4G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-100G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-4G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.35G>A
  hgvsp: ENSP00000435058.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21381
  bin: 7.5e0
  variant carriers: 432
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 19456
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8758
  bin: 1.25e1
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 7
hgvs: p.Arg12His
num of homozygotes: 8
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

11-71155266-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155266
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155266
    reference: chr 11
allele count: 12
allele frequency: 3.479067609880552e-4
allele num: 34492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.34C>T
  hgvsp: ENSP00000435058.1:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-5C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-5C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-5C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-101C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-5C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-5C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-5C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20693
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21674
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.75e1
  variant carriers: 1
hgvs: p.Arg12Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ

11-71155271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155271
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155271
    reference: chr 11
allele count: 72
allele frequency: 2.371385284236875e-3
allele num: 30362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-10G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.29G>A
  hgvsp: ENSP00000435058.1:p.Arg10His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-106G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-10G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-10G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-10G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-10G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-10G>A
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19337
  bin: 7.5e0
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24267
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 9.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 24632
  bin: 7.5e0
  variant carriers: 1
hgvs: p.Arg10His
num of homozygotes: 1
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

11-71155272-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155272
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155272
    reference: chr 11
allele count: 2
allele frequency: 6.637461834594451e-5
allele num: 30132
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-11C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-107C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.28C>T
  hgvsp: ENSP00000435058.1:p.Arg10Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-11C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-11C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-11C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-11C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-11C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19363
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19014
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg10Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

11-71155272-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155272
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155272
    reference: chr 11
allele count: 1
allele frequency: 3.318730917297226e-5
allele num: 30132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-11C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.28C>G
  hgvsp: ENSP00000435058.1:p.Arg10Gly
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-11C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-11C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-11C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-107C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-11C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-11C>G
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4647
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19014
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg10Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

11-71155273-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155273
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155273
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 28964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-12C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-12C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-108C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-12C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-12C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-12C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.27C>T
  hgvsp: ENST00000529990.1:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-12C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18775
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2609
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17748
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25803
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile9Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/11-71155296-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155296
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155296
    reference: chr 11
allele count: 6
allele frequency: 2.820874471086037e-4
allele num: 21270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-35G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-131G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-35G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.4G>T
  hgvsp: ENSP00000435058.1:p.Gly2Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-35G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-35G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-35G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-35G>T
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly2Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

11-71155306-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155306
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155306
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 19624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.1-7A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-45A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-45A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-141A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-45A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-45A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-45A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-45A>G
  variant of: http://identifiers.org/hgnc/2860
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8700
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34851
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1-7A>G
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

11-71155329-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155329
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155329
    reference: chr 11
allele count: 7
allele frequency: 4.022063893357849e-4
allele num: 17404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-68C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-68C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-68C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-68C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-68C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.1-30C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-164C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-68C>A
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27831
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

11-71155338-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155338
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155338
    reference: chr 11
allele count: 1
allele frequency: 5.875440658049354e-5
allele num: 17020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-77A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-77A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-77A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-173A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-77A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.1-39A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-77A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-77A>G
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7682
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

11-71155348-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155348
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155348
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 16600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.99-87C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.99-87C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.1-49C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.99-87C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.99-87C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.99-87C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.99-183C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.99-87C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31999
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11116
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21272
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

11-71155850-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155850
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155850
    reference: chr 11
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+51G>A
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

11-71155858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155858
    reference: chr 11
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+43G>A
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

11-71155863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155863
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155863
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+38G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+38G>A
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

11-71155873-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155873
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155873
    reference: chr 11
allele count: 11
allele frequency: 9.060507717905211e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+28A>G
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

11-71155877-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155877
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155877
    reference: chr 11
allele count: 10
allele frequency: 8.236825198095645e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+24A>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

11-71155880-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155880
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155880
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+21C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+21C>G
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39016
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3003
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-71155882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155882
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155882
    reference: chr 11
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+19C>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-71155887-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155887
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155887
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+14C>G
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3004
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-71155889-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155889
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155889
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+12G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+12G>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3004
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-71155894-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155894
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155894
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-1+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.98+7A>T
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.98+7A>T
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

11-71155907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155907
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155907
    reference: chr 11
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.92G>A
  hgvsp: ENSP00000432589.1:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.92G>A
  hgvsp: ENSP00000347717.3:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.92G>A
  hgvsp: ENSP00000436007.1:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.92G>A
  hgvsp: ENSP00000435047.1:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.92G>A
  hgvsp: ENSP00000384739.2:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.92G>A
  hgvsp: ENSP00000435707.1:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.92G>A
  hgvsp: ENSP00000435668.1:p.Arg31His
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5905
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg31His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-71155908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155908
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155908
    reference: chr 11
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.91C>T
  hgvsp: ENSP00000436007.1:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.91C>T
  hgvsp: ENSP00000432589.1:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.91C>T
  hgvsp: ENSP00000384739.2:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-8C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.91C>T
  hgvsp: ENSP00000435707.1:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.91C>T
  hgvsp: ENSP00000435047.1:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.91C>T
  hgvsp: ENSP00000347717.3:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.91C>T
  hgvsp: ENSP00000435668.1:p.Arg31Cys
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg31Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

11-71155908-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155908
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155908
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.91C>A
  hgvsp: ENSP00000436007.1:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-8C>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.91C>A
  hgvsp: ENSP00000435707.1:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.91C>A
  hgvsp: ENSP00000435668.1:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.91C>A
  hgvsp: ENSP00000347717.3:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.91C>A
  hgvsp: ENSP00000435047.1:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.91C>A
  hgvsp: ENSP00000432589.1:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.91C>A
  hgvsp: ENSP00000384739.2:p.Arg31Ser
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg31Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

11-71155910-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155910
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155910
    reference: chr 11
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.89G>C
  hgvsp: ENSP00000432589.1:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.89G>C
  hgvsp: ENSP00000435707.1:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.89G>C
  hgvsp: ENSP00000435668.1:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.89G>C
  hgvsp: ENSP00000436007.1:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.89G>C
  hgvsp: ENSP00000384739.2:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.89G>C
  hgvsp: ENSP00000435047.1:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.89G>C
  hgvsp: ENSP00000347717.3:p.Gly30Ala
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-10G>C
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly30Ala
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-71155915-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155915
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155915
    reference: chr 11
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.84G>A
  hgvsp: ENST00000407721.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-15G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.84G>A
  hgvsp: ENST00000526780.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.84G>A
  hgvsp: ENST00000531364.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.84G>A
  hgvsp: ENST00000527452.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.84G>A
  hgvsp: ENST00000355527.3:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.84G>A
  hgvsp: ENST00000527316.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.84G>A
  hgvsp: ENST00000525346.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln28Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-71155917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155917
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155917
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.82C>T
  hgvsp: ENSP00000436007.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.82C>T
  hgvsp: ENSP00000435668.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.82C>T
  hgvsp: ENSP00000435047.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.82C>T
  hgvsp: ENSP00000384739.2:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-17C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.82C>T
  hgvsp: ENSP00000435707.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.82C>T
  hgvsp: ENSP00000347717.3:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.82C>T
  hgvsp: ENSP00000432589.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln28Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

11-71155920-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155920
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155920
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.79G>A
  hgvsp: ENSP00000435707.1:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.79G>A
  hgvsp: ENSP00000436007.1:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.79G>A
  hgvsp: ENSP00000432589.1:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.79G>A
  hgvsp: ENSP00000435668.1:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.79G>A
  hgvsp: ENSP00000347717.3:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.79G>A
  hgvsp: ENSP00000384739.2:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.79G>A
  hgvsp: ENSP00000435047.1:p.Gly27Arg
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly27Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

11-71155928-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155928
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155928
    reference: chr 11
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.71C>A
  hgvsp: ENSP00000435668.1:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.71C>A
  hgvsp: ENSP00000435707.1:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.71C>A
  hgvsp: ENSP00000347717.3:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.71C>A
  hgvsp: ENSP00000432589.1:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.71C>A
  hgvsp: ENSP00000436007.1:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.71C>A
  hgvsp: ENSP00000435047.1:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.71C>A
  hgvsp: ENSP00000384739.2:p.Ala24Glu
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-28C>A
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39005
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala24Glu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/11-71155929-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155929
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155929
    reference: chr 11
allele count: 90
allele frequency: 7.412776331828814e-4
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.70G>T
  hgvsp: ENSP00000347717.3:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.70G>T
  hgvsp: ENSP00000435668.1:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.70G>T
  hgvsp: ENSP00000435047.1:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.70G>T
  hgvsp: ENSP00000384739.2:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.70G>T
  hgvsp: ENSP00000435707.1:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.70G>T
  hgvsp: ENSP00000436007.1:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-29G>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.70G>T
  hgvsp: ENSP00000432589.1:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 9.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3391
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala24Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-71155929-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155929
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155929
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-29G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.70G>A
  hgvsp: ENSP00000435047.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.70G>A
  hgvsp: ENSP00000435707.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.70G>A
  hgvsp: ENSP00000347717.3:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.70G>A
  hgvsp: ENSP00000384739.2:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.70G>A
  hgvsp: ENSP00000432589.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.70G>A
  hgvsp: ENSP00000436007.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.70G>A
  hgvsp: ENSP00000435668.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala24Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-71155930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155930
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155930
    reference: chr 11
allele count: 9
allele frequency: 7.412776331828814e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.69C>T
  hgvsp: ENST00000527452.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.69C>T
  hgvsp: ENST00000526780.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.69C>T
  hgvsp: ENST00000531364.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.69C>T
  hgvsp: ENST00000407721.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.69C>T
  hgvsp: ENST00000355527.3:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.69C>T
  hgvsp: ENST00000525346.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.69C>T
  hgvsp: ENST00000527316.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr23Thr
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

11-71155938-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155938
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155939
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.60_61insA
  hgvsp: ENSP00000436007.1:p.Asp21ArgfsTer42
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.60_61insA
  hgvsp: ENSP00000435047.1:p.Asp21ArgfsTer64
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.60_61insA
  hgvsp: ENSP00000435707.1:p.Asp21ArgfsTer42
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.60_61insA
  hgvsp: ENSP00000347717.3:p.Asp21ArgfsTer42
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.60_61insA
  hgvsp: ENSP00000384739.2:p.Asp21ArgfsTer42
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.60_61insA
  hgvsp: ENSP00000432589.1:p.Asp21ArgfsTer42
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.60_61insA
  hgvsp: ENSP00000435668.1:p.Asp21ArgfsTer42
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-39_-38insA
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp21ArgfsTer42
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-71155939-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155939
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155939
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.60T>A
  hgvsp: ENSP00000384739.2:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.60T>A
  hgvsp: ENSP00000436007.1:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.60T>A
  hgvsp: ENSP00000435047.1:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.60T>A
  hgvsp: ENSP00000347717.3:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.60T>A
  hgvsp: ENSP00000435707.1:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.60T>A
  hgvsp: ENSP00000432589.1:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.60T>A
  hgvsp: ENSP00000435668.1:p.Asn20Lys
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn20Lys
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

11-71155941-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155941
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155941
    reference: chr 11
allele count: 9
allele frequency: 7.412776331828814e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.58A>G
  hgvsp: ENSP00000432589.1:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.58A>G
  hgvsp: ENSP00000347717.3:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.58A>G
  hgvsp: ENSP00000384739.2:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.58A>G
  hgvsp: ENSP00000435668.1:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.58A>G
  hgvsp: ENSP00000435707.1:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.58A>G
  hgvsp: ENSP00000435047.1:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.58A>G
  hgvsp: ENSP00000436007.1:p.Asn20Asp
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn20Asp
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

11-71155945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155945
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155945
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.54C>T
  hgvsp: ENST00000527316.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.54C>T
  hgvsp: ENST00000531364.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.54C>T
  hgvsp: ENST00000527452.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-45C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.54C>T
  hgvsp: ENST00000355527.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.54C>T
  hgvsp: ENST00000407721.2:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.54C>T
  hgvsp: ENST00000526780.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.54C>T
  hgvsp: ENST00000525346.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3176
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val18Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-71155947-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155947
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155947
    reference: chr 11
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-47G>A
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.52G>A
  hgvsp: ENSP00000384739.2:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.52G>A
  hgvsp: ENSP00000435047.1:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.52G>A
  hgvsp: ENSP00000347717.3:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.52G>A
  hgvsp: ENSP00000435707.1:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.52G>A
  hgvsp: ENSP00000432589.1:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.52G>A
  hgvsp: ENSP00000436007.1:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.52G>A
  hgvsp: ENSP00000435668.1:p.Val18Ile
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val18Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

11-71155948-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155948
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155948
    reference: chr 11
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.51C>T
  hgvsp: ENST00000527452.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.51C>T
  hgvsp: ENST00000407721.2:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.51C>T
  hgvsp: ENST00000527316.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.51C>T
  hgvsp: ENST00000355527.3:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.51C>T
  hgvsp: ENST00000525346.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.51C>T
  hgvsp: ENST00000531364.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.51C>T
  hgvsp: ENST00000526780.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly17Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

11-71155954-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155954
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155954
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.45A>G
  hgvsp: ENST00000355527.3:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.45A>G
  hgvsp: ENST00000526780.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.45A>G
  hgvsp: ENST00000525346.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.45A>G
  hgvsp: ENST00000527316.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.45A>G
  hgvsp: ENST00000527452.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.45A>G
  hgvsp: ENST00000407721.2:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-54A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.45A>G
  hgvsp: ENST00000531364.1:c.45A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3175
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu15Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-71155961-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71155961
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 71155961
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000384739
  ensembl transcript: ENST00000407721
  gene symbol: DHCR7
  hgvsc: ENST00000407721.2:c.38A>G
  hgvsp: ENSP00000384739.2:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435707
  ensembl transcript: ENST00000525346
  gene symbol: DHCR7
  hgvsc: ENST00000525346.1:c.38A>G
  hgvsp: ENSP00000435707.1:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000436007
  ensembl transcript: ENST00000527452
  gene symbol: DHCR7
  hgvsc: ENST00000527452.1:c.38A>G
  hgvsp: ENSP00000436007.1:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435668
  ensembl transcript: ENST00000526780
  gene symbol: DHCR7
  hgvsc: ENST00000526780.1:c.38A>G
  hgvsp: ENSP00000435668.1:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000432589
  ensembl transcript: ENST00000531364
  gene symbol: DHCR7
  hgvsc: ENST00000531364.1:c.38A>G
  hgvsp: ENSP00000432589.1:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000347717
  ensembl transcript: ENST00000355527
  gene symbol: DHCR7
  hgvsc: ENST00000355527.3:c.38A>G
  hgvsp: ENSP00000347717.3:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435058
  ensembl transcript: ENST00000529990
  gene symbol: DHCR7
  hgvsc: ENST00000529990.1:c.-61A>G
  variant of: http://identifiers.org/hgnc/2860
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172893
  ensembl protein: ENSP00000435047
  ensembl transcript: ENST00000527316
  gene symbol: DHCR7
  hgvsc: ENST00000527316.1:c.38A>G
  hgvsp: ENSP00000435047.1:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/2860
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys13Arg
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 816
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2684
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9626
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.986590038314176e-4
allele num: 8352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.446e0

QD
type: SiteQuality
SIO_000300: 1.016e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

DP
type: SiteQuality
SIO_000300: 1.380323e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

GenotypeQuality
all individuals: 1571
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2742
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6382
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4390
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.579646588417387e-4
allele num: 15506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.159e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.797e0

QD
type: SiteQuality
SIO_000300: 8.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 6.425e0

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

DP
type: SiteQuality
SIO_000300: 1.37888e6

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

GenotypeQuality
all individuals: 1336
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5855
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3575
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18233
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5279
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568086307470363e-5
allele num: 63772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10714
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.37e-1

DP
type: SiteQuality
SIO_000300: 1.385488e6

VQSLOD
type: SiteQuality
SIO_000300: -3.219e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.209e1

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.74e-1

GenotypeQuality
all individuals: 2845
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4918
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4896
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2433
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63750
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.210653753026634e-3
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5780
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.792e1

QD
type: SiteQuality
SIO_000300: 1.435e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.921999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

DP
type: SiteQuality
SIO_000300: 1.389006e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

GenotypeQuality
all individuals: 325
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5242
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 633
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5834
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 503
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4918
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2433
bin: 9.75e1
variant carriers: 46

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.705882352941177e-5
allele num: 63750
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 4.708097928436911e-3
allele num: 9558
num of homozygotes: 1

Latino
type: Population
allele count: 2
allele frequency: 1.870557426112982e-4
allele num: 10692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15442
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

FS
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 1.389006e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.921999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQ
type: SiteQuality
SIO_000300: 5.792e1

GenotypeQuality
all individuals: 24611
bin: 9.75e1
variant carriers: 24607

GenotypeQuality
all individuals: 194
bin: 7.5e0
variant carriers: 173

GenotypeQuality
all individuals: 2170
bin: 3.75e1
variant carriers: 2109

GenotypeQuality
all individuals: 224
bin: 2.5e0
variant carriers: 105

GenotypeQuality
all individuals: 4559
bin: 6.25e1
variant carriers: 3849

GenotypeQuality
all individuals: 345
bin: 1.75e1
variant carriers: 321

GenotypeQuality
all individuals: 641
bin: 2.75e1
variant carriers: 571

GenotypeQuality
all individuals: 995
bin: 2.25e1
variant carriers: 644

GenotypeQuality
all individuals: 1955
bin: 5.75e1
variant carriers: 1937

GenotypeQuality
all individuals: 2879
bin: 8.25e1
variant carriers: 2868

GenotypeQuality
all individuals: 3072
bin: 4.75e1
variant carriers: 3030

GenotypeQuality
all individuals: 1412
bin: 4.25e1
variant carriers: 1375

GenotypeQuality
all individuals: 1324
bin: 8.75e1
variant carriers: 1322

GenotypeQuality
all individuals: 3479
bin: 5.25e1
variant carriers: 3439

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 188

GenotypeQuality
all individuals: 1809
bin: 7.25e1
variant carriers: 1780

European (Finnish)
type: Population
allele count: 5775
allele frequency: 9.461009174311926e-1
allele num: 6104
num of homozygotes: 2731

Latino
type: Population
allele count: 8156
allele frequency: 7.542075087849085e-1
allele num: 10814
num of homozygotes: 3044

European (Non-Finnish)
type: Population
allele count: 61266
allele frequency: 9.431051999630553e-1
allele num: 64962
num of homozygotes: 28900

South Asian
type: Population
allele count: 10949
allele frequency: 6.87405826217981e-1
allele num: 15928
num of homozygotes: 3769

East Asian
type: Population
allele count: 7120
allele frequency: 8.51063829787234e-1
allele num: 8366
num of homozygotes: 3022

African
type: Population
allele count: 8277
allele frequency: 8.428716904276986e-1
allele num: 9820
num of homozygotes: 3465

Other
type: Population
allele count: 771
allele frequency: 8.862068965517241e-1
allele num: 870
num of homozygotes: 345

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.28e0

DP
type: SiteQuality
SIO_000300: 1.887926e6

FS
type: SiteQuality
SIO_000300: 1.101e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.008e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

QD
type: SiteQuality
SIO_000300: 3.02e1

GenotypeQuality
all individuals: 1733
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 449
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 729
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3493
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 2.5e0
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GenotypeQuality
all individuals: 5197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5501
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6979
bin: 9.75e1
variant carriers: 73

GenotypeQuality
all individuals: 2834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.833516685001834e-4
allele num: 5454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.098659635245001e-4
allele num: 9102
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.2531328320802e-4
allele num: 7980
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.154068090017311e-3
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 9.742230172165969e-4
allele num: 62614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

QD
type: SiteQuality
SIO_000300: 1.381e1

DP
type: SiteQuality
SIO_000300: 1.502419e6

VQSLOD
type: SiteQuality
SIO_000300: -4.675e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

GenotypeQuality
all individuals: 2918
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
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variant carriers: 0

GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 6911
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5188
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5508
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variant carriers: 1

GenotypeQuality
all individuals: 4459
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variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59877214299418e-5
allele num: 62548
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.350074254083974e-4
allele num: 14814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

DP
type: SiteQuality
SIO_000300: 1.501307e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.67e-1

FS
type: SiteQuality
SIO_000300: 7.548e0

QD
type: SiteQuality
SIO_000300: 9.42e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

VQSLOD
type: SiteQuality
SIO_000300: -1.766e0

MQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

GenotypeQuality
all individuals: 1762
bin: 3.25e1
variant carriers: 1151

GenotypeQuality
all individuals: 801
bin: 2.5e0
variant carriers: 157

GenotypeQuality
all individuals: 28118
bin: 9.75e1
variant carriers: 27590

GenotypeQuality
all individuals: 6276
bin: 6.25e1
variant carriers: 1784

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 601

GenotypeQuality
all individuals: 2623
bin: 6.75e1
variant carriers: 1693

GenotypeQuality
all individuals: 2196
bin: 5.25e1
variant carriers: 1915

GenotypeQuality
all individuals: 1615
bin: 7.75e1
variant carriers: 1261

GenotypeQuality
all individuals: 577
bin: 1.75e1
variant carriers: 360

GenotypeQuality
all individuals: 399
bin: 1.25e1
variant carriers: 239

GenotypeQuality
all individuals: 2264
bin: 4.75e1
variant carriers: 1889

GenotypeQuality
all individuals: 1116
bin: 7.25e1
variant carriers: 817

GenotypeQuality
all individuals: 1967
bin: 3.75e1
variant carriers: 1440

GenotypeQuality
all individuals: 1226
bin: 4.25e1
variant carriers: 951

GenotypeQuality
all individuals: 1408
bin: 8.25e1
variant carriers: 1122

GenotypeQuality
all individuals: 1191
bin: 5.75e1
variant carriers: 1037

Latino
type: Population
allele count: 5541
allele frequency: 5.515628110690822e-1
allele num: 10046
num of homozygotes: 1446

European (Finnish)
type: Population
allele count: 3188
allele frequency: 6.017365043412608e-1
allele num: 5298
num of homozygotes: 905

African
type: Population
allele count: 3743
allele frequency: 4.148747506096209e-1
allele num: 9022
num of homozygotes: 756

Other
type: Population
allele count: 449
allele frequency: 5.77120822622108e-1
allele num: 778
num of homozygotes: 129

South Asian
type: Population
allele count: 3240
allele frequency: 2.208588957055215e-1
allele num: 14670
num of homozygotes: 387

European (Non-Finnish)
type: Population
allele count: 43432
allele frequency: 7.015118232329758e-1
allele num: 61912
num of homozygotes: 15003

East Asian
type: Population
allele count: 3045
allele frequency: 3.898847631241997e-1
allele num: 7810
num of homozygotes: 536

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.328e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.477e0

DP
type: SiteQuality
SIO_000300: 1.560459e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.292e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.96e0

FS
type: SiteQuality
SIO_000300: 1.092e0

GenotypeQuality
all individuals: 2799
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

GenotypeQuality
all individuals: 382
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variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2385
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19308
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.873501199040767e-5
allele num: 53376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13914
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.75e1

MQRankSum
type: SiteQuality
SIO_000300: -1.351e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.768e0

FS
type: SiteQuality
SIO_000300: 1.669e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.034e1

DP
type: SiteQuality
SIO_000300: 1.164272e6

GenotypeQuality
all individuals: 593
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3538
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18377
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variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
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variant carriers: 0

GenotypeQuality
all individuals: 988
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variant carriers: 0

GenotypeQuality
all individuals: 377
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variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2800
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.888930865130336e-5
allele num: 52940
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.158239e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 17549
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 853
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 992
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1104
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2491
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 939
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 2207
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 632
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1344
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 17354
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 858
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 3.923620193565263e-4
allele num: 7646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.784298176050753e-4
allele num: 50440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 1.144819690898683e-3
allele num: 3494
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.571355104139882e-4
allele num: 7778
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.416310908287944e-4
allele num: 13586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.958579881656805e-4
allele num: 6760
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.41204e2

VQSLOD
type: SiteQuality
SIO_000300: -9.281999999999999e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.284e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.157286e6

QD
type: SiteQuality
SIO_000300: 2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.99e-1

GenotypeQuality
all individuals: 1864
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
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variant carriers: 0

GenotypeQuality
all individuals: 624
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variant carriers: 0

GenotypeQuality
all individuals: 496
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variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 348
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22522
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
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variant carriers: 0

GenotypeQuality
all individuals: 21476
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.2465719272002e-4
allele num: 8022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50724
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

FS
type: SiteQuality
SIO_000300: 4.832e0

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

DP
type: SiteQuality
SIO_000300: 1.133733e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

QD
type: SiteQuality
SIO_000300: 1.417e1

GenotypeQuality
all individuals: 1901
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 7.5e0
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GenotypeQuality
all individuals: 23481
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
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GenotypeQuality
all individuals: 1085
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 611
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.042400228748826e-5
allele num: 48962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13290
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 7.43e0

VQSLOD
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

FS
type: SiteQuality
SIO_000300: 1.146e0

DP
type: SiteQuality
SIO_000300: 1.101779e6

GenotypeQuality
all individuals: 600
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47996
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.80112513303938e-4
allele num: 13154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e0

FS
type: SiteQuality
SIO_000300: 6.386e0

DP
type: SiteQuality
SIO_000300: 1.082951e6

QD
type: SiteQuality
SIO_000300: 1.295e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.632422530911312e-5
allele num: 13102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103757310556654e-5
allele num: 47534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
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SIO_000300: -5.445e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 1.087e0

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 1.076637e6

QD
type: SiteQuality
SIO_000300: 7.97e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7576
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.309113300492611e-4
allele num: 12992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46720
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 4.175946547884187e-4
allele num: 7184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3664
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

DP
type: SiteQuality
SIO_000300: 1.05937e6

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 5.128e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3538
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.347345728914039e-4
allele num: 7422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45454
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

FS
type: SiteQuality
SIO_000300: 1.193e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.048e0

DP
type: SiteQuality
SIO_000300: 1.03251e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

QD
type: SiteQuality
SIO_000300: 1.785e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.48e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.639344262295082e-4
allele num: 6100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44918
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-2

QD
type: SiteQuality
SIO_000300: 1.621e1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.128e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

DP
type: SiteQuality
SIO_000300: 1.023945e6

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-2

FS
type: SiteQuality
SIO_000300: 2.163e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3224
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.538935056940597e-4
allele num: 6498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.975770822675906e-5
allele num: 43006
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.57e0

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2

DP
type: SiteQuality
SIO_000300: 9.88286e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.11e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7018
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5720
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.555209953343701e-4
allele num: 6430
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.348961758902565e-5
allele num: 42572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.189e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.79763e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.520034272466106e-5
allele num: 39682
num of homozygotes: 0

African
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allele frequency: 1.349325337331334e-3
allele num: 6670
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 11994
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2810
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.62844702467344e-4
allele num: 2756
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.549069589599796e-5
allele num: 39230
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.78e-1

QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 9.06034e5

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

GenotypeQuality
all individuals: 4269
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.883239171374765e-4
allele num: 5310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36336
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 4.824702476680605e-4
allele num: 6218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 8.52005e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 4.81e0

GenotypeQuality
all individuals: 5247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1825
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1073
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 263
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 325
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.916642361313656e-4
allele num: 34286
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.555944055944056e-4
allele num: 4576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

FS
type: SiteQuality
SIO_000300: 3.045e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

DP
type: SiteQuality
SIO_000300: 8.24762e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeQuality
all individuals: 5715
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7426
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1159
bin: 9.75e1
variant carriers: 197

GenotypeQuality
all individuals: 1682
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 287
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 33427
bin: 2.25e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.718213058419244e-4
allele num: 5820
num of homozygotes: 0

South Asian
type: Population
allele count: 174
allele frequency: 1.570964247020585e-2
allele num: 11076
num of homozygotes: 2

Latino
type: Population
allele count: 4
allele frequency: 8.417508417508417e-4
allele num: 4752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 6.29156929714183e-4
allele num: 33378
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 6.787330316742082e-3
allele num: 442
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.57e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

DP
type: SiteQuality
SIO_000300: 8.12077e5

QD
type: SiteQuality
SIO_000300: 1.241e1

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6249
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33944
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.830831197363603e-4
allele num: 10924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4268
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 7.95616e5

QD
type: SiteQuality
SIO_000300: 1.141e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

GenotypeQuality
all individuals: 736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 979
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.228501228501228e-4
allele num: 32560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1998
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.154155986818015e-5
allele num: 10924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4268
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

DP
type: SiteQuality
SIO_000300: 7.95616e5

FS
type: SiteQuality
SIO_000300: 9.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 476
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34012
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 326
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.852194850898315e-4
allele num: 10798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.258213905751299e-5
allele num: 31958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

DP
type: SiteQuality
SIO_000300: 7.89161e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.013e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

QD
type: SiteQuality
SIO_000300: 9.59e0

GenotypeQuality
all individuals: 1796
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8068
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 543
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5326
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.908032818164472e-4
allele num: 10482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.58913e5

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 8.141999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.72e-2

QD
type: SiteQuality
SIO_000300: 1.323e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

MQ
type: SiteQuality
SIO_000300: 6.013e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9927
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 522
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.060595347521742e-4
allele num: 28286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.246e0

DP
type: SiteQuality
SIO_000300: 7.33462e5

GenotypeQuality
all individuals: 23032
bin: 2.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1436
bin: 1.25e1
variant carriers: 22

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 44

GenotypeQuality
all individuals: 1410
bin: 6.75e1
variant carriers: 12

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 20

GenotypeQuality
all individuals: 2144
bin: 1.75e1
variant carriers: 23

GenotypeQuality
all individuals: 20077
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 519
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1079
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 65

GenotypeQuality
all individuals: 1510
bin: 9.75e1
variant carriers: 621

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 40

GenotypeQuality
all individuals: 4869
bin: 6.25e1
variant carriers: 21

GenotypeQuality
all individuals: 573
bin: 8.25e1
variant carriers: 63

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 18

GenotypeQuality
all individuals: 868
bin: 2.75e1
variant carriers: 5

South Asian
type: Population
allele count: 56
allele frequency: 6.196061075459172e-3
allele num: 9038
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 41
allele frequency: 5.203045685279188e-2
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 2.739043824701195e-3
allele num: 4016
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 2.362948960302457e-3
allele num: 2116
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 5.511022044088177e-3
allele num: 1996
num of homozygotes: 1

Other
type: Population
allele count: 4
allele frequency: 1.449275362318841e-2
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 500
allele frequency: 2.661273153076432e-2
allele num: 18788
num of homozygotes: 6

QD
type: SiteQuality
SIO_000300: 1.382e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 6.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.73e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 6.1996e5

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 492
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1534
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 4809
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 7.00770847932726e-4
allele num: 17124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.97621e5

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

QD
type: SiteQuality
SIO_000300: 1.372e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1240
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 675
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variant carriers: 1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 70
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variant carriers: 6

GenotypeQuality
all individuals: 487
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GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 18515
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variant carriers: 1

GenotypeQuality
all individuals: 2753
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 4574
bin: 6.25e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14660
num of homozygotes: 0

African
type: Population
allele count: 72
allele frequency: 2.032749858836815e-2
allele num: 3542
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1282
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.398e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.62e-2

DP
type: SiteQuality
SIO_000300: 5.6624e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 4647
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variant carriers: 0

GenotypeQuality
all individuals: 24845
bin: 7.5e0
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GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 314
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GenotypeQuality
all individuals: 671
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variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.326663564448581e-4
allele num: 8596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.68e-2

QD
type: SiteQuality
SIO_000300: 1.033e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 1.486e0

DP
type: SiteQuality
SIO_000300: 5.63353e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
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variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 24845
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 399
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.693440428380187e-4
allele num: 1494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.68e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

DP
type: SiteQuality
SIO_000300: 5.63353e5

FS
type: SiteQuality
SIO_000300: 1.486e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.033e1

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13800
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 5.5235e5

FS
type: SiteQuality
SIO_000300: 3.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.179e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.83e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.343e1

VQSLOD
type: SiteQuality
SIO_000300: -6.106e-1

GenotypeQuality
all individuals: 1343
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 33073
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GenotypeQuality
all individuals: 231
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variant carriers: 0

GenotypeQuality
all individuals: 9770
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 3629
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
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GenotypeQuality
all individuals: 500
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variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.21483942414175e-4
allele num: 9030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.982561036372695e-4
allele num: 8028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1859e1

VQSLOD
type: SiteQuality
SIO_000300: -3.993e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.510000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 4.48042e5

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.941e0

GenotypeQuality
all individuals: 498
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
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variant carriers: 0

GenotypeQuality
all individuals: 33578
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 5.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7067
bin: 2.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.431e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 4.10783e5

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.01e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 2199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 3134
bin: 2.25e1
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GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
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variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
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GenotypeQuality
all individuals: 848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.967460927491673e-4
allele num: 7806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.974e0

DP
type: SiteQuality
SIO_000300: 3.46063e5

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 1.1595e1

QD
type: SiteQuality
SIO_000300: 1.221e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.95e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25095
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.284356537374775e-4
allele num: 7786
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
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MQRankSum
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FS
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: -3.018e0

MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.32e-1

VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1602
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6290
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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MQ
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QD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

South Asian
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MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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InbreedingCoeff
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QD
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SIO_000300: 1.186e1

BaseQRankSum
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SIO_000300: -5.695e0

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 6.661821705426356e-4
allele num: 16512
num of homozygotes: 0

African
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
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QD
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DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8652
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African
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Latino
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European (Finnish)
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South Asian
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Other
type: Population
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66738
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East Asian
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South Asian
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European (Finnish)
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African
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Other
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ClippingRankSum
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BaseQRankSum
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QD
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FS
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VQSLOD
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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South Asian
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Other
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66738
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East Asian
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European (Finnish)
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Latino
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Other
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African
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South Asian
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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SIO_000300: 5.36e-1

DP
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SIO_000300: 3.198942e6

MQ
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SIO_000300: 5.95e1

QD
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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DP
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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SIO_000300: 2.19e0

MQ
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SIO_000300: 5.972e1

ClippingRankSum
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SIO_000300: 7.07e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10406
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

FS
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SIO_000300: 1.286e0

VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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SIO_000300: 5.8e-1

QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

Latino
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South Asian
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allele num: 16512
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FS
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DP
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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Other
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South Asian
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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European (Finnish)
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DP
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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Other
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African
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South Asian
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European (Non-Finnish)
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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QD
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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Other
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East Asian
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Other
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East Asian
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South Asian
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European (Non-Finnish)
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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VQSLOD
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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VQSLOD
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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South Asian
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MQRankSum
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DP
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QD
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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DP
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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European (Finnish)
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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DP
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MQ
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MQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3177
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38971
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.193e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 1.094e0

MQRankSum
type: SiteQuality
SIO_000300: 8.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.19892e6

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38969
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3177
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: -8.987000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.283e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 8.38e-1

DP
type: SiteQuality
SIO_000300: 3.198509e6

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5940
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38969
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

DP
type: SiteQuality
SIO_000300: 3.198681e6

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.488e1

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.82e-1