12-28336693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28336693
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28336693
    reference: chr 12
allele count: 1
allele frequency: 9.373828271466067e-5
allele num: 10668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-94C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-86+37590C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000247934
  ensembl transcript: ENST00000473753
  gene symbol: RP11-967K21.1
  hgvsc: ENST00000473753.2:n.420+6187G>A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.-38C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-94C>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

12-28336698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28336698
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28336698
    reference: chr 12
allele count: 1
allele frequency: 9.375585974123383e-5
allele num: 10666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.-33G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-89G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000247934
  ensembl transcript: ENST00000473753
  gene symbol: RP11-967K21.1
  hgvsc: ENST00000473753.2:n.420+6182C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-86+37595G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-89G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

12-28336713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28336713
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28336713
    reference: chr 12
allele count: 2442
allele frequency: 2.292957746478873e-1
allele num: 10650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-74C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.-18C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-74C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000247934
  ensembl transcript: ENST00000473753
  gene symbol: RP11-967K21.1
  hgvsc: ENST00000473753.2:n.420+6167G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-86+37610C>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 283
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.25e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 2.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.25e1
  variant carriers: 314
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 2.5e0
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 292
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 7.5e0
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 9.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 3
num of homozygotes: 293
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

12-28336729-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28336729
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28336729
    reference: chr 12
allele count: 1
allele frequency: 9.458948164964057e-5
allele num: 10572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-86+37626C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-58C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-58C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000247934
  ensembl transcript: ENST00000473753
  gene symbol: RP11-967K21.1
  hgvsc: ENST00000473753.2:n.420+6151G>A
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

12-28336757-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28336757
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28336757
    reference: chr 12
allele count: 9
allele frequency: 8.599273839098032e-4
allele num: 10466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-86+37654C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000247934
  ensembl transcript: ENST00000473753
  gene symbol: RP11-967K21.1
  hgvsc: ENST00000473753.2:n.420+6123G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.27C>T
  hgvsp: ENST00000540794.1:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro9Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

12-28410101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410101
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410101
    reference: chr 12
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31307G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73329G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-48G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48481G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-34G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46430
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

12-28410101-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410101
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410101
    reference: chr 12
allele count: 4
allele frequency: 3.296413502109704e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48481G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-48G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73329G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31307G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-34G>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46430
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-28410103-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410103
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410103
    reference: chr 12
allele count: 264
allele frequency: 2.175704631613648e-3
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48479G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-46G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73331G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31309G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-32G>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46434
  bin: 9.75e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 2
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

12-28410104-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410104
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410104
    reference: chr 12
allele count: 54
allele frequency: 4.453534787055059e-4
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73332C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-45C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31310C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48478C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-31C>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46422
  bin: 9.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP

12-28410105-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410105
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410105
    reference: chr 12
allele count: 1577
allele frequency: 1.299611023206751e-2
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48477G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73333G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-30G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31311G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46436
  bin: 9.75e1
  variant carriers: 1427
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 94
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

12-28410106-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410106
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410106
    reference: chr 12
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31312G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-29G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48476G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73334G>T
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46349
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

12-28410107-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410107
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410107
    reference: chr 12
allele count: 64
allele frequency: 5.274087747634902e-4
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73335G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-42G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31313G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-28G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48475G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46349
  bin: 9.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 2
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/12-28410116-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410116
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410116
    reference: chr 12
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73344A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31322A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-19A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-33A>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48466A>C
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

12-28410117-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410117
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410117
    reference: chr 12
allele count: 8
allele frequency: 6.592392379194409e-5
allele num: 121352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31323A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73345A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-32A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48465A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-18A>G
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

12-28410121-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410121
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410119
    reference: chr 12
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48460_199-48459delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73350_42+73351delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-27_-26delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31328_-19+31329delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-13_-14-12delTT
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: CTT
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

12-28410123-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410123
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410123
    reference: chr 12
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-26T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14-12T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73351T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31329T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48459T>C
  variant of: http://identifiers.org/hgnc/24855
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

12-28410135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410135
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410135
    reference: chr 12
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48447G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73363G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31341G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-14G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-14G>A
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

12-28410137-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410137
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410137
    reference: chr 12
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48445G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73365G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31343G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-12G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-12G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

12-28410146-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410146
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410146
    reference: chr 12
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48436A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31352A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73374A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

12-28410153-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410153
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410153
    reference: chr 12
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.5A>G
  hgvsp: ENSP00000370658.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73381A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.5A>G
  hgvsp: ENSP00000442544.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48429A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.5A>G
  hgvsp: ENSP00000370655.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.5A>G
  hgvsp: ENSP00000438558.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.5A>G
  hgvsp: ENSP00000441651.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31359A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.5A>G
  hgvsp: ENSP00000445660.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.5A>G
  hgvsp: ENSP00000440194.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.5A>G
  hgvsp: ENSP00000438040.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.5A>G
  hgvsp: ENSP00000440513.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.5A>G
  hgvsp: ENSP00000446045.1:p.Asp2Gly
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp2Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

12-28410193-T-TTATGTCAAAATACTCTCCAACTTAAATGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410193
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410223
    reference: chr 12
allele count: 2
allele frequency: 1.647989452867502e-5
allele num: 121360
alternate allele: TTATGTCAAAATACTCTCCAACTTAAATGTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

12-28410194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410194
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410194
    reference: chr 12
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31400T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48388T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.30+16T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73422T>C
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46345
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

12-28410195-A-ATGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410195
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410198
    reference: chr 12
allele count: 7
allele frequency: 5.767772980455489e-5
allele num: 121364
alternate allele: ATGT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48387_199-48386insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73423_42+73424insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31401_-19+31402insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.30+17_30+18insTGT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

12-28410195-A-ATGTCAAAATACTCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410195
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410209
    reference: chr 12
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: ATGTCAAAATACTCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

12-28410195-A-ATGTCAAAATACTCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410195
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410210
    reference: chr 12
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: ATGTCAAAATACTCTC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/12-28410196-C-CAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410196
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410199
    reference: chr 12
allele count: 2
allele frequency: 1.649974425396406e-5
allele num: 121214
alternate allele: CAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73425_42+73426insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48385_199-48384insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31403_-19+31404insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.30+19_30+20insAAA
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

12-28410196-C-CAAAATACTCTCCAACTTAAATGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410196
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410219
    reference: chr 12
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: CAAAATACTCTCCAACTTAAATGT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

12-28410196-C-CAAAATACTCTCCAACTTAAATGTATACAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410196
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410225
    reference: chr 12
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: CAAAATACTCTCCAACTTAAATGTATACAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

12-28410196-C-CAAAATACTCTCCAACTTAAATGTATACATATTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410196
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410229
    reference: chr 12
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: CAAAATACTCTCCAACTTAAATGTATACATATTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46354
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

12-28410196-C-CAAAATACTCTCCAACTTAAATGTATACATATTTATTTGTAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410196
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410237
    reference: chr 12
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: CAAAATACTCTCCAACTTAAATGTATACATATTTATTTGTAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

12-28410198-T-TACTCTCCAACTTAAATGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410198
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410217
    reference: chr 12
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: TACTCTCCAACTTAAATGTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46352
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

12-28410220-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410220
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410220
    reference: chr 12
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48362G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31426G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.30+42G>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73448G>C
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46338
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

12-28410227-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28410227
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28410227
    reference: chr 12
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+31433A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+73455A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-48355A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.30+49A>G
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

12-28412249-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412249
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412249
    reference: chr 12
allele count: 4
allele frequency: 3.332888948140248e-5
allele num: 120016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75477A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33455A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46333A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.31-48A>G
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11201
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

12-28412254-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412254
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412254
    reference: chr 12
allele count: 1
allele frequency: 8.328613785521537e-6
allele num: 120068
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46328T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33460T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75482T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.31-43T>G
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11294
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

12-28412264-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412264
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412264
    reference: chr 12
allele count: 1
allele frequency: 8.3166999334664e-6
allele num: 120240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33470A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75492A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.31-33A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46318A>T
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11720
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

12-28412267-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412267
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412267
    reference: chr 12
allele count: 1
allele frequency: 8.31282835672009e-6
allele num: 120296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46315T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33473T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.31-30T>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75495T>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

12-28412290-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412290
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412290
    reference: chr 12
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33496C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46292C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.31-7C>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75518C>G
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.31-7C>G
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

12-28412290-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412290
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412290
    reference: chr 12
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75518C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33496C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46292C>T
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.31-7C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP

12-28412302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412302
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412302
    reference: chr 12
allele count: 19
allele frequency: 1.572274999172487e-4
allele num: 120844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33508G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.36G>A
  hgvsp: ENST00000543534.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.36G>A
  hgvsp: ENST00000381256.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.36G>A
  hgvsp: ENST00000536442.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.36G>A
  hgvsp: ENST00000535520.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.36G>A
  hgvsp: ENST00000538586.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46280G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.36G>A
  hgvsp: ENST00000545336.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.36G>A
  hgvsp: ENST00000381259.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.36G>A
  hgvsp: ENST00000545737.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.36G>A
  hgvsp: ENST00000543809.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.36G>A
  hgvsp: ENST00000539107.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75530G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala12Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-28412313-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412313
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412313
    reference: chr 12
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33519A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.47A>G
  hgvsp: ENSP00000445660.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.47A>G
  hgvsp: ENSP00000441651.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.47A>G
  hgvsp: ENSP00000438040.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.47A>G
  hgvsp: ENSP00000440194.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.47A>G
  hgvsp: ENSP00000370655.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.47A>G
  hgvsp: ENSP00000440513.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.47A>G
  hgvsp: ENSP00000370658.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.47A>G
  hgvsp: ENSP00000442544.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.47A>G
  hgvsp: ENSP00000446045.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46269A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75541A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.47A>G
  hgvsp: ENSP00000438558.1:p.Asp16Gly
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp16Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-28412315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412315
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412315
    reference: chr 12
allele count: 2
allele frequency: 1.653986106516705e-5
allele num: 120920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.49G>A
  hgvsp: ENSP00000445660.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.49G>A
  hgvsp: ENSP00000438558.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.49G>A
  hgvsp: ENSP00000370655.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.49G>A
  hgvsp: ENSP00000441651.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.49G>A
  hgvsp: ENSP00000440194.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46267G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75543G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.49G>A
  hgvsp: ENSP00000440513.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.49G>A
  hgvsp: ENSP00000438040.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.49G>A
  hgvsp: ENSP00000370658.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.49G>A
  hgvsp: ENSP00000442544.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.49G>A
  hgvsp: ENSP00000446045.1:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33521G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly17Ser
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

12-28412323-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412323
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412323
    reference: chr 12
allele count: 1
allele frequency: 8.266512358435975e-6
allele num: 120970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.57T>C
  hgvsp: ENST00000536442.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.57T>C
  hgvsp: ENST00000545737.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.57T>C
  hgvsp: ENST00000543809.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.57T>C
  hgvsp: ENST00000545336.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.57T>C
  hgvsp: ENST00000538586.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46259T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.57T>C
  hgvsp: ENST00000381259.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.57T>C
  hgvsp: ENST00000535520.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.57T>C
  hgvsp: ENST00000543534.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.57T>C
  hgvsp: ENST00000539107.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75551T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.57T>C
  hgvsp: ENST00000381256.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33529T>C
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser19Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

12-28412332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412332
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412332
    reference: chr 12
allele count: 5
allele frequency: 4.132436319156322e-5
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75560C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33538C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.66C>T
  hgvsp: ENST00000545737.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46250C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.66C>T
  hgvsp: ENST00000543534.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.66C>T
  hgvsp: ENST00000539107.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.66C>T
  hgvsp: ENST00000381259.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.66C>T
  hgvsp: ENST00000536442.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.66C>T
  hgvsp: ENST00000545336.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.66C>T
  hgvsp: ENST00000381256.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.66C>T
  hgvsp: ENST00000538586.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.66C>T
  hgvsp: ENST00000535520.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.66C>T
  hgvsp: ENST00000543809.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr22Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

12-28412341-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412341
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412341
    reference: chr 12
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.75A>G
  hgvsp: ENST00000539107.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.75A>G
  hgvsp: ENST00000543809.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.75A>G
  hgvsp: ENST00000381259.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.75A>G
  hgvsp: ENST00000543534.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.75A>G
  hgvsp: ENST00000538586.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.75A>G
  hgvsp: ENST00000545336.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46241A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.75A>G
  hgvsp: ENST00000535520.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75569A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.75A>G
  hgvsp: ENST00000545737.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.75A>G
  hgvsp: ENST00000536442.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33547A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.75A>G
  hgvsp: ENST00000381256.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr25Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

12-28412346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412346
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412346
    reference: chr 12
allele count: 2
allele frequency: 1.652974527662529e-5
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.80C>T
  hgvsp: ENSP00000440194.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46236C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.80C>T
  hgvsp: ENSP00000442544.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.80C>T
  hgvsp: ENSP00000446045.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.80C>T
  hgvsp: ENSP00000445660.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33552C>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.80C>T
  hgvsp: ENSP00000440513.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.80C>T
  hgvsp: ENSP00000370655.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.80C>T
  hgvsp: ENSP00000438040.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.80C>T
  hgvsp: ENSP00000441651.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.80C>T
  hgvsp: ENSP00000438558.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.80C>T
  hgvsp: ENSP00000370658.1:p.Pro27Leu
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75574C>T
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro27Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

12-28412347-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412347
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412347
    reference: chr 12
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.81T>C
  hgvsp: ENST00000536442.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.81T>C
  hgvsp: ENST00000381256.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.81T>C
  hgvsp: ENST00000543809.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46235T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.81T>C
  hgvsp: ENST00000545336.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.81T>C
  hgvsp: ENST00000538586.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.81T>C
  hgvsp: ENST00000535520.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75575T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.81T>C
  hgvsp: ENST00000545737.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.81T>C
  hgvsp: ENST00000381259.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.81T>C
  hgvsp: ENST00000543534.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33553T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.81T>C
  hgvsp: ENST00000539107.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro27Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

12-28412351-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412351
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412351
    reference: chr 12
allele count: 1
allele frequency: 8.26541913940456e-6
allele num: 120986
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.85A>G
  hgvsp: ENSP00000440194.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.85A>G
  hgvsp: ENSP00000438040.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.85A>G
  hgvsp: ENSP00000370655.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.85A>G
  hgvsp: ENSP00000446045.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.85A>G
  hgvsp: ENSP00000438558.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46231A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33557A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.85A>G
  hgvsp: ENSP00000441651.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.85A>G
  hgvsp: ENSP00000370658.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.85A>G
  hgvsp: ENSP00000442544.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.85A>G
  hgvsp: ENSP00000445660.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75579A>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.85A>G
  hgvsp: ENSP00000440513.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile29Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-28412361-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412361
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412361
    reference: chr 12
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.95C>A
  hgvsp: ENSP00000446045.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.95C>A
  hgvsp: ENSP00000370658.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.95C>A
  hgvsp: ENSP00000438558.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.95C>A
  hgvsp: ENSP00000442544.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.95C>A
  hgvsp: ENSP00000445660.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.95C>A
  hgvsp: ENSP00000440194.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.95C>A
  hgvsp: ENSP00000438040.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46221C>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.95C>A
  hgvsp: ENSP00000370655.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.95C>A
  hgvsp: ENSP00000440513.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75589C>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.95C>A
  hgvsp: ENSP00000441651.1:p.Ala32Asp
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33567C>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala32Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-28412372-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412372
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412372
    reference: chr 12
allele count: 27081
allele frequency: 2.240395115655713e-1
allele num: 120876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.106G>A
  hgvsp: ENSP00000441651.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.106G>A
  hgvsp: ENSP00000370658.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.106G>A
  hgvsp: ENSP00000370655.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.106G>A
  hgvsp: ENSP00000442544.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.106G>A
  hgvsp: ENSP00000438558.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.106G>A
  hgvsp: ENSP00000446045.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33578G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46210G>A
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.106G>A
  hgvsp: ENSP00000440194.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.106G>A
  hgvsp: ENSP00000438040.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.106G>A
  hgvsp: ENSP00000445660.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.106G>A
  hgvsp: ENSP00000440513.1:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75600G>A
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 8.25e1
  variant carriers: 772
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 5.75e1
  variant carriers: 2412
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 2.75e1
  variant carriers: 440
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 3.25e1
  variant carriers: 825
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 6.25e1
  variant carriers: 2222
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 3.75e1
  variant carriers: 1366
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 4.25e1
  variant carriers: 1927
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 6.75e1
  variant carriers: 1805
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 5.25e1
  variant carriers: 2465
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7167
  bin: 2.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 8.75e1
  variant carriers: 599
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 30
genotype quality: GenotypeQuality
hgvs: p.Ala36Thr
num of homozygotes: 3609
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

12-28412379-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412379
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412379
    reference: chr 12
allele count: 3
allele frequency: 2.482251898922703e-5
allele num: 120858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33585T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46203T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75607T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+4T>C
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10156
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.109+4T>C
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

12-28412383-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412383
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412383
    reference: chr 12
allele count: 1
allele frequency: 8.295175525914129e-6
allele num: 120552
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46199T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+8T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33589T>C
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75611T>C
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.109+8T>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

12-28412395-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412395
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412395
    reference: chr 12
allele count: 3
allele frequency: 3.877471888328809e-5
allele num: 77370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46187A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33601A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75623A>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+20A>T
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

12-28412395-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412395
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412394
    reference: chr 12
allele count: 6008
allele frequency: 7.765283701693163e-2
allele num: 77370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33604delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75626delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46184delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+23delG
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 1.75e1
  variant carriers: 1570
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 1204
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 1.25e1
  variant carriers: 1945
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 6.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 5.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 3.75e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 944
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 4.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
num of homozygotes: 295
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: AG
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP

12-28412396-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412396
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412396
    reference: chr 12
allele count: 2
allele frequency: 3.636495872577185e-5
allele num: 54998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46186G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75624G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+21G>T
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33602G>T
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

12-28412397-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
allele count: 6475
allele frequency: 9.730111501818291e-2
allele num: 66546
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33603_-19+33604insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75625_42+75626insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+22_109+23insT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46185_199-46184insT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 1407
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 4.25e1
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.75e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 3.25e1
  variant carriers: 603
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.75e1
  variant carriers: 914
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 5.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 1.75e1
  variant carriers: 1476
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 479
genotype quality: GenotypeQuality
num of homozygotes: 601
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

12-28412397-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412399
    reference: chr 12
allele count: 1092
allele frequency: 1.640970155982328e-2
allele num: 66546
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75625_42+75626insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46185_199-46184insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33603_-19+33604insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+22_109+23insTT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 4.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 8587
  bin: 2.25e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 1.75e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 83
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

12-28412397-G-GTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412400
    reference: chr 12
allele count: 168
allele frequency: 2.524569470742043e-3
allele num: 66546
alternate allele: GTTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46185_199-46184insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33603_-19+33604insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75625_42+75626insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+22_109+23insTTT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 1.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8587
  bin: 2.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 8
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

12-28412397-G-GTTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412401
    reference: chr 12
allele count: 24
allele frequency: 3.606527815345776e-4
allele num: 66546
alternate allele: GTTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33603_-19+33604insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75625_42+75626insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46185_199-46184insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+22_109+23insTTTT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8587
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

12-28412397-GGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412395
    reference: chr 12
allele count: 1368
allele frequency: 2.055720854747092e-2
allele num: 66546
alternate allele: G
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 4.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 3.25e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 1.75e1
  variant carriers: 397
genotype depth: GenotypeDepth
  all individuals: 8587
  bin: 2.25e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.75e1
  variant carriers: 306
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 1.25e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 2433
  bin: 2.75e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 7.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 3.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 16471
  bin: 2.5e0
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 9.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 2911
  bin: 6.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 7.5e0
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 4.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 2.25e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 5.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 3792
  bin: 3.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 5.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 1.75e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 7.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 9.75e1
  variant carriers: 524
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 6.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 4.75e1
  variant carriers: 57
num of homozygotes: 1
population: South Asian
  type: Population
  allele count: 121
  allele frequency: 1.224448492208055e-2
  allele num: 9882
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 92
  allele frequency: 1.932773109243698e-2
  allele num: 4760
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 111
  allele frequency: 2.844695028190672e-2
  allele num: 3902
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 797
  allele frequency: 2.218572542033181e-2
  allele num: 35924
  num of homozygotes: 1
population: Latino
population: Other
population: African
reference allele: GGT
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

12-28412397-GGTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412394
    reference: chr 12
allele count: 145
allele frequency: 2.178943888438073e-3
allele num: 66546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33604_-19+33606delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75626_42+75628delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46184_199-46182delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+23_109+25delGTT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8587
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: GGTT
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

12-28412398-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412399
    reference: chr 12
allele count: 1028
allele frequency: 1.087945814371891e-2
allele num: 94490
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46167dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+40dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75643dupT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33621dupT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 1.25e1
  variant carriers: 480
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

12-28412398-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412400
    reference: chr 12
allele count: 111
allele frequency: 1.174727484389883e-3
allele num: 94490
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75642_42+75643dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46168_199-46167dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33620_-19+33621dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+39_109+40dupTT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 1.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

12-28412398-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
allele count: 37158
allele frequency: 3.932479627473807e-1
allele num: 94490
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 7190
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 1.75e1
  variant carriers: 6484
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 1402
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 2432
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.75e1
  variant carriers: 5816
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 779
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 1.25e1
  variant carriers: 3628
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.25e1
  variant carriers: 4013
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 901
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 2.5e0
  variant carriers: 551
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 6.75e1
  variant carriers: 997
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 6.25e1
  variant carriers: 1006
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 1.75e1
  variant carriers: 636
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 982
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 5.25e1
  variant carriers: 987
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 2.75e1
  variant carriers: 740
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 8.75e1
  variant carriers: 670
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 7.25e1
  variant carriers: 870
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 594
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 8.25e1
  variant carriers: 765
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 2.25e1
  variant carriers: 667
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 1079
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 597
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 3.75e1
  variant carriers: 829
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 4.25e1
  variant carriers: 918
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 7.75e1
  variant carriers: 805
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 3.25e1
  variant carriers: 838
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 9.25e1
  variant carriers: 625
genotype quality: GenotypeQuality
  all individuals: 23658
  bin: 9.75e1
  variant carriers: 19376
num of homozygotes: 5622
population: European (Finnish)
  type: Population
  allele count: 2031
  allele frequency: 3.852427921092564e-1
  allele num: 5272
  num of homozygotes: 234
population: East Asian
  type: Population
  allele count: 2306
  allele frequency: 3.387191539365452e-1
  allele num: 6808
  num of homozygotes: 292
population: South Asian
  type: Population
  allele count: 5533
  allele frequency: 4.150787696924231e-1
  allele num: 13330
  num of homozygotes: 961
population: African
  type: Population
  allele count: 2383
  allele frequency: 3.040316407246746e-1
  allele num: 7838
  num of homozygotes: 259
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

12-28412398-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412397
    reference: chr 12
allele count: 13503
allele frequency: 1.429040110064557e-1
allele num: 94490
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46167delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75643delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33621delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+40delT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.75e1
  variant carriers: 2023
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 1.75e1
  variant carriers: 4513
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 881
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 3381
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 1.25e1
  variant carriers: 3145
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 614
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
num of homozygotes: 2
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: GT
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

12-28412398-GTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412396
    reference: chr 12
allele count: 1081
allele frequency: 1.144036405968886e-2
allele num: 94490
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000444440
  ensembl transcript: ENST00000536154
  gene symbol: CCDC91
  hgvsc: ENST00000536154.1:c.-19+33620_-19+33621delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000446045
  ensembl transcript: ENST00000543534
  gene symbol: CCDC91
  hgvsc: ENST00000543534.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441714
  ensembl transcript: ENST00000540794
  gene symbol: CCDC91
  hgvsc: ENST00000540794.1:c.42+75642_42+75643delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370655
  ensembl transcript: ENST00000381256
  gene symbol: CCDC91
  hgvsc: ENST00000381256.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440194
  ensembl transcript: ENST00000538586
  gene symbol: CCDC91
  hgvsc: ENST00000538586.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000442544
  ensembl transcript: ENST00000545737
  gene symbol: CCDC91
  hgvsc: ENST00000545737.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000370658
  ensembl transcript: ENST00000381259
  gene symbol: CCDC91
  hgvsc: ENST00000381259.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl transcript: ENST00000544649
  gene symbol: CCDC91
  hgvsc: ENST00000544649.1:n.199-46168_199-46167delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000445660
  ensembl transcript: ENST00000536442
  gene symbol: CCDC91
  hgvsc: ENST00000536442.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438040
  ensembl transcript: ENST00000545336
  gene symbol: CCDC91
  hgvsc: ENST00000545336.1:c.109+39_109+40delTT
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 1.25e1
  variant carriers: 349
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.75e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: GTT
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

12-28412398-GTTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412398
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412395
    reference: chr 12
allele count: 96
allele frequency: 1.015980527039898e-3
allele num: 94490
alternate allele: G
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 1.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 1.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 2.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 6.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 2.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 4.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23658
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 1.75e1
  variant carriers: 6
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.392757660167131e-3
  allele num: 718
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 15
  allele frequency: 1.67075072399198e-3
  allele num: 8978
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 14
  allele frequency: 2.056404230317274e-3
  allele num: 6808
  num of homozygotes: 0
population: African
  type: Population
  allele count: 3
  allele frequency: 3.827507017096198e-4
  allele num: 7838
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: GTTT
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

12-28412399-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 28412399
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 28412399
    reference: chr 12
allele count: 2
allele frequency: 7.79848709350386e-5
allele num: 25646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000440513
  ensembl transcript: ENST00000539107
  gene symbol: CCDC91
  hgvsc: ENST00000539107.1:c.109+24T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000438558
  ensembl transcript: ENST00000535520
  gene symbol: CCDC91
  hgvsc: ENST00000535520.1:c.109+24T>G
  variant of: http://identifiers.org/hgnc/24855
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123106
  ensembl protein: ENSP00000441651
  ensembl transcript: ENST00000543809
  gene symbol: CCDC91
  hgvsc: ENST00000543809.1:c.109+24T>G
  variant of: http://identifiers.org/hgnc/24855
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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FS
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QD
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MQRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Latino
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Other
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FS
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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Latino
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African
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South Asian
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East Asian
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Other
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South Asian
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FS
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ReadPosRankSum
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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Other
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European (Finnish)
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South Asian
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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South Asian
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East Asian
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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FS
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DP
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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MQ
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DP
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QD
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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South Asian
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Latino
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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South Asian
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Latino
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55874
bin: 9.75e1
variant carriers: 1481

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 53
allele frequency: 7.945550491724634e-4
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.153402537485583e-3
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 7.709251101321586e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1378
allele frequency: 1.191835322608545e-1
allele num: 11562
num of homozygotes: 92

European (Finnish)
type: Population
allele count: 125
allele frequency: 1.889930450559419e-2
allele num: 6614
num of homozygotes: 2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.051e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.532e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.82e0

DP
type: SiteQuality
SIO_000300: 7.992243e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.93e-1

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55852
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 7.909337e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.014e0

FS
type: SiteQuality
SIO_000300: 9.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

QD
type: SiteQuality
SIO_000300: 1.491e1

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55853
bin: 9.75e1
variant carriers: 62

GenotypeQuality
all individuals: 409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 59
allele frequency: 6.817656574994222e-3
allele num: 8654
num of homozygotes: 2

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998320940273447e-5
allele num: 66704
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

FS
type: SiteQuality
SIO_000300: 7.55e-1

DP
type: SiteQuality
SIO_000300: 7.911044e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.218e0

QD
type: SiteQuality
SIO_000300: 1.388e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.23e-2

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55855
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 412
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

QD
type: SiteQuality
SIO_000300: 1.561e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.908561e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.76e0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55856
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.199292417473691e-4
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e0

DP
type: SiteQuality
SIO_000300: 7.908899e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

QD
type: SiteQuality
SIO_000300: 1.552e1

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55854
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.039e1

FS
type: SiteQuality
SIO_000300: 3.455e0

MQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 7.90884e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.849e0

QD
type: SiteQuality
SIO_000300: 1.763e1

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55854
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.321e0

DP
type: SiteQuality
SIO_000300: 7.90897e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.07e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.666e0

QD
type: SiteQuality
SIO_000300: 1.72e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeDepth
all individuals: 46345
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1230
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 626
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1583
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55854
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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QD
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MQ
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SIO_000300: 5.981e1

FS
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DP
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -4.8e-1

MQRankSum
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SIO_000300: -5.05e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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Other
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South Asian
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Latino
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FS
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DP
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.968e1

MQRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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African
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East Asian
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FS
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SIO_000300: 2.504e0

ClippingRankSum
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DP
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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SIO_000300: 5.961e1

BaseQRankSum
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SIO_000300: 7.47e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ReadPosRankSum
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SIO_000300: 1.02e0

MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQ
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SIO_000300: 5.943e1

FS
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ClippingRankSum
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SIO_000300: -1.649e0

BaseQRankSum
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QD
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SIO_000300: 1.327e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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allele num: 11566
num of homozygotes: 0

African
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European (Finnish)
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num of homozygotes: 0

Other
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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Latino
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MQRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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East Asian
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Latino
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South Asian
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African
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European (Non-Finnish)
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MQRankSum
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FS
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QD
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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allele frequency: 8.644536652835408e-5
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European (Non-Finnish)
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
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QD
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ClippingRankSum
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

African
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Latino
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East Asian
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European (Finnish)
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Other
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South Asian
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 1.51285930408472e-4
allele num: 6610
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Other
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Latino
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South Asian
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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FS
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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African
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South Asian
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East Asian
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European (Non-Finnish)
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MQ
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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FS
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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South Asian
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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South Asian
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VQSLOD
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DP
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ReadPosRankSum
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QD
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MQ
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FS
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BaseQRankSum
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SIO_000300: -7.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55810
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

FS
type: SiteQuality
SIO_000300: 3.526e0

ClippingRankSum
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SIO_000300: -1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

QD
type: SiteQuality
SIO_000300: 1.512e1

DP
type: SiteQuality
SIO_000300: 7.904418e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 298
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variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -4.0e-4

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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QD
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SIO_000300: 1.538e1

ClippingRankSum
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SIO_000300: 6.12e-1

BaseQRankSum
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SIO_000300: 5.8e0

MQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.75e-2

DP
type: SiteQuality
SIO_000300: 7.902377e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.661934338952973e-4
allele num: 11270
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513546238837597e-5
allele num: 66070
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.678e0

DP
type: SiteQuality
SIO_000300: 2.233892e6

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.231e1

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2573
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51308821304282e-5
allele num: 66090
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.188e0

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

ClippingRankSum
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SIO_000300: 2.7e-2

MQ
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SIO_000300: 5.907e1

BaseQRankSum
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SIO_000300: -1.9e-1

ReadPosRankSum
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SIO_000300: 1.9e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

DP
type: SiteQuality
SIO_000300: 2.24524e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.862105636299185e-5
allele num: 11284
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66200
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
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East Asian
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allele frequency: 0.0e0
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DP
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FS
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509844184080203e-5
allele num: 66232
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.504483360414034e-5
allele num: 66468
num of homozygotes: 0

MQ
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.504483360414034e-5
allele num: 66468
num of homozygotes: 0

Other
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African
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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SIO_000300: 1.93e0

DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 12
allele frequency: 1.803968731208659e-4
allele num: 66520
num of homozygotes: 0

South Asian
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allele frequency: 1.213886865744113e-4
allele num: 16476
num of homozygotes: 0

East Asian
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allele count: 1
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allele num: 8632
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Other
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allele count: 0
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num of homozygotes: 0

African
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allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.76273576590869e-4
allele num: 11346
num of homozygotes: 0

DP
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QD
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FS
type: SiteQuality
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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SIO_000300: 7.199999999999999e-2

BaseQRankSum
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SIO_000300: 2.07e0

ReadPosRankSum
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SIO_000300: 5.629999999999999e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
type: Population
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FS
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QD
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BaseQRankSum
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MQRankSum
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DP
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
type: Population
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Latino
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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African
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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African
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Other
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Latino
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European (Finnish)
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South Asian
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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MQRankSum
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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South Asian
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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East Asian
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66574
num of homozygotes: 0

South Asian
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African
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Other
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -8.3e-2

QD
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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FS
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MQRankSum
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SIO_000300: 5.03e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele num: 16496
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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DP
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

African
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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Other
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DP
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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QD
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1023

GenotypeDepth
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variant carriers: 502

GenotypeDepth
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GenotypeDepth
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variant carriers: 1468

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 23151

European (Non-Finnish)
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allele count: 19614
allele frequency: 2.949030221019396e-1
allele num: 66510
num of homozygotes: 2895

African
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allele frequency: 5.443354491248317e-2
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num of homozygotes: 16

East Asian
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allele frequency: 3.857738646895274e-2
allele num: 8632
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Other
type: Population
allele count: 219
allele frequency: 2.411894273127753e-1
allele num: 908
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Latino
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allele count: 1279
allele frequency: 1.125087966220971e-1
allele num: 11368
num of homozygotes: 92

European (Finnish)
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allele count: 1947
allele frequency: 2.961667173714633e-1
allele num: 6574
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South Asian
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allele count: 3123
allele frequency: 1.894334586922237e-1
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.510735550610453e-5
allele num: 66508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 5.453e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.404e0

DP
type: SiteQuality
SIO_000300: 2.37826e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 6.043e1

VQSLOD
type: SiteQuality
SIO_000300: -6.156e-1

QD
type: SiteQuality
SIO_000300: 1.772e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 433
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GenotypeQuality
all individuals: 1827
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.99e-1

DP
type: SiteQuality
SIO_000300: 2.315543e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 1.71e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.279e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeDepth
all individuals: 4014
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 4168
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 466
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GenotypeQuality
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GenotypeQuality
all individuals: 991
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 802
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4196
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 869
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variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.170172084130019e-5
allele num: 41840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 8.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

MQ
type: SiteQuality
SIO_000300: 6.102e1

DP
type: SiteQuality
SIO_000300: 1.882171e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

QD
type: SiteQuality
SIO_000300: 5.51e0

GenotypeDepth
all individuals: 4014
bin: 4.25e1
variant carriers: 150

GenotypeDepth
all individuals: 8147
bin: 3.25e1
variant carriers: 437

GenotypeDepth
all individuals: 9352
bin: 2.75e1
variant carriers: 762

GenotypeDepth
all individuals: 880
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variant carriers: 8

GenotypeQuality
all individuals: 1920
bin: 5.25e1
variant carriers: 322

GenotypeQuality
all individuals: 991
bin: 7.75e1
variant carriers: 220

GenotypeQuality
all individuals: 551
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variant carriers: 141

GenotypeQuality
all individuals: 2126
bin: 1.75e1
variant carriers: 254

GenotypeQuality
all individuals: 3453
bin: 2.75e1
variant carriers: 270

GenotypeQuality
all individuals: 855
bin: 7.25e1
variant carriers: 253

GenotypeQuality
all individuals: 1721
bin: 1.25e1
variant carriers: 235

GenotypeQuality
all individuals: 2150
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variant carriers: 360

GenotypeQuality
all individuals: 5087
bin: 3.25e1
variant carriers: 310

GenotypeQuality
all individuals: 1607
bin: 6.75e1
variant carriers: 264

GenotypeQuality
all individuals: 466
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variant carriers: 167

GenotypeQuality
all individuals: 10373
bin: 2.5e0
variant carriers: 183

GenotypeQuality
all individuals: 2616
bin: 7.5e0
variant carriers: 244

GenotypeQuality
all individuals: 2947
bin: 6.25e1
variant carriers: 318

GenotypeQuality
all individuals: 869
bin: 5.75e1
variant carriers: 340

GenotypeQuality
all individuals: 802
bin: 8.25e1
variant carriers: 207

GenotypeQuality
all individuals: 2922
bin: 4.75e1
variant carriers: 380

GenotypeQuality
all individuals: 4196
bin: 9.75e1
variant carriers: 2481

GenotypeQuality
all individuals: 6668
bin: 2.25e1
variant carriers: 254

GenotypeQuality
all individuals: 4168
bin: 3.75e1
variant carriers: 341

South Asian
type: Population
allele count: 605
allele frequency: 5.088309503784693e-2
allele num: 11890
num of homozygotes: 31

European (Non-Finnish)
type: Population
allele count: 3445
allele frequency: 8.233747609942639e-2
allele num: 41840
num of homozygotes: 182

Other
type: Population
allele count: 44
allele frequency: 7.260726072607261e-2
allele num: 606
num of homozygotes: 2

African
type: Population
allele count: 437
allele frequency: 6.101647584473611e-2
allele num: 7162
num of homozygotes: 10

European (Finnish)
type: Population
allele count: 494
allele frequency: 1.018976897689769e-1
allele num: 4848
num of homozygotes: 11

Latino
type: Population
allele count: 584
allele frequency: 1.072740631888317e-1
allele num: 5444
num of homozygotes: 40

East Asian
type: Population
allele count: 399
allele frequency: 7.150537634408602e-2
allele num: 5580
num of homozygotes: 19

QD
type: SiteQuality
SIO_000300: 5.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.102e1

FS
type: SiteQuality
SIO_000300: 8.88e-1

DP
type: SiteQuality
SIO_000300: 1.882171e6

GenotypeDepth
all individuals: 7762
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
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variant carriers: 0

GenotypeDepth
all individuals: 902
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variant carriers: 0

GenotypeDepth
all individuals: 121
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variant carriers: 0

GenotypeQuality
all individuals: 2503
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variant carriers: 0

GenotypeQuality
all individuals: 440
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variant carriers: 0

GenotypeQuality
all individuals: 380
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variant carriers: 0

GenotypeQuality
all individuals: 1595
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variant carriers: 0

GenotypeQuality
all individuals: 3524
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variant carriers: 0

GenotypeQuality
all individuals: 2156
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GenotypeQuality
all individuals: 1232
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1546
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
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variant carriers: 0

GenotypeQuality
all individuals: 504
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variant carriers: 0

GenotypeQuality
all individuals: 4954
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variant carriers: 1

GenotypeQuality
all individuals: 2768
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variant carriers: 0

GenotypeQuality
all individuals: 563
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GenotypeQuality
all individuals: 272
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variant carriers: 0

GenotypeQuality
all individuals: 10775
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GenotypeQuality
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GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 1702
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variant carriers: 0

GenotypeQuality
all individuals: 1032
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variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.888001102080176e-5
allele num: 29036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3338
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.238e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.809999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 6.062e1

VQSLOD
type: SiteQuality
SIO_000300: -3.023e0

DP
type: SiteQuality
SIO_000300: 1.61996e6

FS
type: SiteQuality
SIO_000300: 2.811e0

MQRankSum
type: SiteQuality
SIO_000300: -1.225e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeDepth
all individuals: 278
bin: 7.75e1
variant carriers: 15

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 10

GenotypeDepth
all individuals: 217
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variant carriers: 5

GenotypeDepth
all individuals: 8587
bin: 2.25e1
variant carriers: 1188

GenotypeQuality
all individuals: 3374
bin: 3.75e1
variant carriers: 253

GenotypeQuality
all individuals: 1460
bin: 1.25e1
variant carriers: 176

GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 263

GenotypeQuality
all individuals: 1829
bin: 4.25e1
variant carriers: 234

GenotypeQuality
all individuals: 2433
bin: 2.75e1
variant carriers: 237

GenotypeQuality
all individuals: 1600
bin: 6.75e1
variant carriers: 214

GenotypeQuality
all individuals: 1827
bin: 1.75e1
variant carriers: 220

GenotypeQuality
all individuals: 1497
bin: 5.25e1
variant carriers: 273

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 113

GenotypeQuality
all individuals: 16471
bin: 2.5e0
variant carriers: 156

GenotypeQuality
all individuals: 1930
bin: 7.5e0
variant carriers: 205

GenotypeQuality
all individuals: 4324
bin: 2.25e1
variant carriers: 213

GenotypeQuality
all individuals: 694
bin: 5.75e1
variant carriers: 204

GenotypeQuality
all individuals: 760
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variant carriers: 187

GenotypeQuality
all individuals: 5790
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variant carriers: 3228

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 164

GenotypeQuality
all individuals: 691
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variant carriers: 147

GenotypeQuality
all individuals: 3792
bin: 3.25e1
variant carriers: 241

GenotypeQuality
all individuals: 416
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variant carriers: 140

GenotypeQuality
all individuals: 2911
bin: 6.25e1
variant carriers: 205

East Asian
type: Population
allele count: 393
allele frequency: 8.256302521008403e-2
allele num: 4760
num of homozygotes: 37

South Asian
type: Population
allele count: 1141
allele frequency: 1.154624569925116e-1
allele num: 9882
num of homozygotes: 87

Other
type: Population
allele count: 32
allele frequency: 6.274509803921569e-2
allele num: 510
num of homozygotes: 3

African
type: Population
allele count: 397
allele frequency: 6.201187129022181e-2
allele num: 6402
num of homozygotes: 26

European (Finnish)
type: Population
allele count: 358
allele frequency: 9.174782162993336e-2
allele num: 3902
num of homozygotes: 26

Latino
type: Population
allele count: 658
allele frequency: 1.273712737127371e-1
allele num: 5166
num of homozygotes: 68

European (Non-Finnish)
type: Population
allele count: 3496
allele frequency: 9.731655717626099e-2
allele num: 35924
num of homozygotes: 354

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.893e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

DP
type: SiteQuality
SIO_000300: 1.931913e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQ
type: SiteQuality
SIO_000300: 6.055e1

FS
type: SiteQuality
SIO_000300: 2.166e0

QD
type: SiteQuality
SIO_000300: 7.3e0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7998
bin: 3.25e1
variant carriers: 119

GenotypeDepth
all individuals: 153
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variant carriers: 1

GenotypeQuality
all individuals: 2911
bin: 6.25e1
variant carriers: 23

GenotypeQuality
all individuals: 1460
bin: 1.25e1
variant carriers: 33

GenotypeQuality
all individuals: 1829
bin: 4.25e1
variant carriers: 38

GenotypeQuality
all individuals: 471
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variant carriers: 16

GenotypeQuality
all individuals: 3792
bin: 3.25e1
variant carriers: 61

GenotypeQuality
all individuals: 16471
bin: 2.5e0
variant carriers: 22

GenotypeQuality
all individuals: 2433
bin: 2.75e1
variant carriers: 39

GenotypeQuality
all individuals: 694
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GenotypeQuality
all individuals: 1827
bin: 1.75e1
variant carriers: 35

GenotypeQuality
all individuals: 1930
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variant carriers: 45

GenotypeQuality
all individuals: 4324
bin: 2.25e1
variant carriers: 27

GenotypeQuality
all individuals: 691
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variant carriers: 22

GenotypeQuality
all individuals: 3374
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variant carriers: 46

GenotypeQuality
all individuals: 416
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GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 45

GenotypeQuality
all individuals: 5790
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variant carriers: 611

GenotypeQuality
all individuals: 1497
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GenotypeQuality
all individuals: 1600
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variant carriers: 31

GenotypeQuality
all individuals: 760
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variant carriers: 24

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 24

Other
type: Population
allele count: 6
allele frequency: 1.176470588235294e-2
allele num: 510
num of homozygotes: 0

East Asian
type: Population
allele count: 82
allele frequency: 1.722689075630252e-2
allele num: 4760
num of homozygotes: 5

Latino
type: Population
allele count: 94
allele frequency: 1.819589624467673e-2
allele num: 5166
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 606
allele frequency: 1.68689455517203e-2
allele num: 35924
num of homozygotes: 55

South Asian
type: Population
allele count: 179
allele frequency: 1.8113742157458e-2
allele num: 9882
num of homozygotes: 10

African
type: Population
allele count: 67
allele frequency: 1.046547953764449e-2
allele num: 6402
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 58
allele frequency: 1.486417221937468e-2
allele num: 3902
num of homozygotes: 4

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.893e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

FS
type: SiteQuality
SIO_000300: 2.166e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

QD
type: SiteQuality
SIO_000300: 7.3e0

MQ
type: SiteQuality
SIO_000300: 6.055e1

DP
type: SiteQuality
SIO_000300: 1.931913e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

GenotypeDepth
all individuals: 7998
bin: 3.25e1
variant carriers: 17

GenotypeDepth
all individuals: 4082
bin: 4.25e1
variant carriers: 9

GenotypeDepth
all individuals: 1593
bin: 5.25e1
variant carriers: 3

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16471
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 1600
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1829
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 694
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2911
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1460
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1930
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 4324
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2433
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1827
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3374
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 5790
bin: 9.75e1
variant carriers: 111

GenotypeQuality
all individuals: 760
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1497
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3792
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.281394156842645e-3
allele num: 3902
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 4.065040650406504e-3
allele num: 5166
num of homozygotes: 1

African
type: Population
allele count: 14
allele frequency: 2.186816619806311e-3
allele num: 6402
num of homozygotes: 1

South Asian
type: Population
allele count: 34
allele frequency: 3.44059906901437e-3
allele num: 9882
num of homozygotes: 2

Other
type: Population
allele count: 2
allele frequency: 3.92156862745098e-3
allele num: 510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 83
allele frequency: 2.310433136621757e-3
allele num: 35924
num of homozygotes: 2

East Asian
type: Population
allele count: 9
allele frequency: 1.890756302521008e-3
allele num: 4760
num of homozygotes: 2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

FS
type: SiteQuality
SIO_000300: 2.166e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.893e-1

DP
type: SiteQuality
SIO_000300: 1.931913e6

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 7.3e0

MQ
type: SiteQuality
SIO_000300: 6.055e1

GenotypeDepth
all individuals: 6104
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 3543
bin: 1.25e1
variant carriers: 7

GenotypeDepth
all individuals: 950
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1075
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1460
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2433
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1827
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4324
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16471
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3374
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5790
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 760
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 3.124023742580444e-4
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.059704513256426e-4
allele num: 9882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.56278831368529e-4
allele num: 3902
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.96078431372549e-3
allele num: 510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5166
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.201680672268908e-4
allele num: 4760
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 3.618750695913595e-4
allele num: 35924
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

QD
type: SiteQuality
SIO_000300: 7.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

DP
type: SiteQuality
SIO_000300: 1.931913e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.893e-1

FS
type: SiteQuality
SIO_000300: 2.166e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQ
type: SiteQuality
SIO_000300: 6.055e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

Latino
type: Population
allele count: 127
allele frequency: 2.45838172667441e-2
allele num: 5166
num of homozygotes: 0

Other
type: Population
allele count: 10
allele frequency: 1.96078431372549e-2
allele num: 510
num of homozygotes: 0

African
type: Population
allele count: 110
allele frequency: 1.718213058419244e-2
allele num: 6402
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 7.3e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQ
type: SiteQuality
SIO_000300: 6.055e1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 2.166e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

DP
type: SiteQuality
SIO_000300: 1.931913e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.893e-1

GenotypeDepth
all individuals: 4082
bin: 4.25e1
variant carriers: 6

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9181
bin: 2.75e1
variant carriers: 34

GenotypeDepth
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 16471
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 1497
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 694
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2433
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1930
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 1829
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2404
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3374
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1460
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1827
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4324
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 471
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2911
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 5790
bin: 9.75e1
variant carriers: 73

GenotypeQuality
all individuals: 760
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1600
bin: 6.75e1
variant carriers: 5

East Asian
type: Population
allele count: 11
allele frequency: 2.310924369747899e-3
allele num: 4760
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.4058106841612e-3
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 1.619105444242056e-3
allele num: 9882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 95
allele frequency: 2.644471662398397e-3
allele num: 35924
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.96078431372549e-3
allele num: 510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.281394156842645e-3
allele num: 3902
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 1.548586914440573e-3
allele num: 5166
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

FS
type: SiteQuality
SIO_000300: 2.166e0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

QD
type: SiteQuality
SIO_000300: 7.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.893e-1

MQ
type: SiteQuality
SIO_000300: 6.055e1

DP
type: SiteQuality
SIO_000300: 1.931913e6

GenotypeDepth
all individuals: 12764
bin: 1.75e1
variant carriers: 489

GenotypeDepth
all individuals: 83
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 250
bin: 6.75e1
variant carriers: 8

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1904
bin: 3.75e1
variant carriers: 117

GenotypeQuality
all individuals: 1907
bin: 3.25e1
variant carriers: 131

GenotypeQuality
all individuals: 1773
bin: 6.25e1
variant carriers: 59

GenotypeQuality
all individuals: 1814
bin: 1.25e1
variant carriers: 163

GenotypeQuality
all individuals: 2025
bin: 7.5e0
variant carriers: 158

GenotypeQuality
all individuals: 1314
bin: 8.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1994
bin: 4.75e1
variant carriers: 87

GenotypeQuality
all individuals: 1765
bin: 1.75e1
variant carriers: 147

GenotypeQuality
all individuals: 4583
bin: 2.5e0
variant carriers: 197

GenotypeQuality
all individuals: 1433
bin: 7.75e1
variant carriers: 37

GenotypeQuality
all individuals: 1865
bin: 2.75e1
variant carriers: 126

GenotypeQuality
all individuals: 1563
bin: 7.25e1
variant carriers: 40

GenotypeQuality
all individuals: 1915
bin: 4.25e1
variant carriers: 109

GenotypeQuality
all individuals: 1898
bin: 5.75e1
variant carriers: 66

GenotypeQuality
all individuals: 1769
bin: 6.75e1
variant carriers: 38

GenotypeQuality
all individuals: 1895
bin: 2.25e1
variant carriers: 132

GenotypeQuality
all individuals: 1082
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1899
bin: 5.25e1
variant carriers: 88

GenotypeQuality
all individuals: 23658
bin: 9.75e1
variant carriers: 77

Other
type: Population
allele count: 10
allele frequency: 1.392757660167131e-2
allele num: 718
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.875440658049354e-4
allele num: 6808
num of homozygotes: 0

African
type: Population
allele count: 185
allele frequency: 2.360295993875989e-2
allele num: 7838
num of homozygotes: 0

Latino
type: Population
allele count: 38
allele frequency: 4.232568500779683e-3
allele num: 8978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 46
allele frequency: 8.725341426403643e-3
allele num: 5272
num of homozygotes: 0

South Asian
type: Population
allele count: 149
allele frequency: 1.117779444861215e-2
allele num: 13330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 596
allele frequency: 1.156248787490785e-2
allele num: 51546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.031e-1

DP
type: SiteQuality
SIO_000300: 1.469352e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

FS
type: SiteQuality
SIO_000300: 2.063e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

QD
type: SiteQuality
SIO_000300: 9.57e0

GenotypeDepth
all individuals: 1923
bin: 4.25e1
variant carriers: 6

GenotypeDepth
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 250
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8550
bin: 2.75e1
variant carriers: 23

GenotypeQuality
all individuals: 1314
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1904
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1915
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1907
bin: 3.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1899
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 1895
bin: 2.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1082
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1898
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4583
bin: 2.5e0
variant carriers: 20

GenotypeQuality
all individuals: 1563
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1865
bin: 2.75e1
variant carriers: 13

GenotypeQuality
all individuals: 1814
bin: 1.25e1
variant carriers: 23

GenotypeQuality
all individuals: 2025
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 1433
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1765
bin: 1.75e1
variant carriers: 16

GenotypeQuality
all individuals: 1769
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1773
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 23658
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 1994
bin: 4.75e1
variant carriers: 12

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.327769347496206e-3
allele num: 5272
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.468860164512338e-4
allele num: 6808
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.125281320330082e-3
allele num: 13330
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.913753508548099e-3
allele num: 7838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 65
allele frequency: 1.261009583672836e-3
allele num: 51546
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 6.683002895967921e-4
allele num: 8978
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.785515320334262e-3
allele num: 718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 2.063e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.031e-1

QD
type: SiteQuality
SIO_000300: 9.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 1.469352e6

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

European (Non-Finnish)
type: Population
allele count: 20829
allele frequency: 4.040856710511e-1
allele num: 51546
num of homozygotes: 3178

Latino
type: Population
allele count: 3795
allele frequency: 4.226999331699711e-1
allele num: 8978
num of homozygotes: 651

Other
type: Population
allele count: 281
allele frequency: 3.913649025069638e-1
allele num: 718
num of homozygotes: 47

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.031e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.469352e6

FS
type: SiteQuality
SIO_000300: 2.063e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

QD
type: SiteQuality
SIO_000300: 9.57e0

GenotypeDepth
all individuals: 5602
bin: 3.25e1
variant carriers: 1102

GenotypeDepth
all individuals: 157
bin: 7.25e1
variant carriers: 43

GenotypeDepth
all individuals: 450
bin: 5.75e1
variant carriers: 79

GenotypeDepth
all individuals: 293
bin: 9.75e1
variant carriers: 110

GenotypeQuality
all individuals: 1915
bin: 4.25e1
variant carriers: 716

GenotypeQuality
all individuals: 1994
bin: 4.75e1
variant carriers: 725

GenotypeQuality
all individuals: 1082
bin: 9.25e1
variant carriers: 433

GenotypeQuality
all individuals: 4583
bin: 2.5e0
variant carriers: 640

GenotypeQuality
all individuals: 2025
bin: 7.5e0
variant carriers: 701

GenotypeQuality
all individuals: 1907
bin: 3.25e1
variant carriers: 705

GenotypeQuality
all individuals: 1898
bin: 5.75e1
variant carriers: 728

GenotypeQuality
all individuals: 1899
bin: 5.25e1
variant carriers: 699

GenotypeQuality
all individuals: 1765
bin: 1.75e1
variant carriers: 680

GenotypeQuality
all individuals: 1904
bin: 3.75e1
variant carriers: 731

GenotypeQuality
all individuals: 1433
bin: 7.75e1
variant carriers: 566

GenotypeQuality
all individuals: 1814
bin: 1.25e1
variant carriers: 714

GenotypeQuality
all individuals: 1895
bin: 2.25e1
variant carriers: 720

GenotypeQuality
all individuals: 1563
bin: 7.25e1
variant carriers: 575

GenotypeQuality
all individuals: 1865
bin: 2.75e1
variant carriers: 729

GenotypeQuality
all individuals: 1773
bin: 6.25e1
variant carriers: 633

GenotypeQuality
all individuals: 23658
bin: 9.75e1
variant carriers: 4618

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 477

GenotypeQuality
all individuals: 1314
bin: 8.25e1
variant carriers: 471

GenotypeQuality
all individuals: 1769
bin: 6.75e1
variant carriers: 659

South Asian
type: Population
allele count: 1620
allele frequency: 1.215303825956489e-1
allele num: 13330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7092
allele frequency: 1.37585845652427e-1
allele num: 51546
num of homozygotes: 1

East Asian
type: Population
allele count: 1216
allele frequency: 1.786133960047004e-1
allele num: 6808
num of homozygotes: 0

Other
type: Population
allele count: 105
allele frequency: 1.462395543175488e-1
allele num: 718
num of homozygotes: 0

African
type: Population
allele count: 1523
allele frequency: 1.943097729012503e-1
allele num: 7838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 780
allele frequency: 1.479514415781487e-1
allele num: 5272
num of homozygotes: 1

Latino
type: Population
allele count: 1167
allele frequency: 1.299844063265761e-1
allele num: 8978
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.031e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 2.063e0

QD
type: SiteQuality
SIO_000300: 9.57e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 1.469352e6

GenotypeDepth
all individuals: 12764
bin: 1.75e1
variant carriers: 493

GenotypeDepth
all individuals: 232
bin: 2.5e0
variant carriers: 3

GenotypeDepth
all individuals: 157
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 314
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1769
bin: 6.75e1
variant carriers: 46

GenotypeQuality
all individuals: 4583
bin: 2.5e0
variant carriers: 176

GenotypeQuality
all individuals: 1994
bin: 4.75e1
variant carriers: 63

GenotypeQuality
all individuals: 1907
bin: 3.25e1
variant carriers: 101

GenotypeQuality
all individuals: 1904
bin: 3.75e1
variant carriers: 75

GenotypeQuality
all individuals: 1433
bin: 7.75e1
variant carriers: 41

GenotypeQuality
all individuals: 1166
bin: 8.75e1
variant carriers: 28

GenotypeQuality
all individuals: 1895
bin: 2.25e1
variant carriers: 112

GenotypeQuality
all individuals: 1082
bin: 9.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1773
bin: 6.25e1
variant carriers: 51

GenotypeQuality
all individuals: 1814
bin: 1.25e1
variant carriers: 132

GenotypeQuality
all individuals: 1865
bin: 2.75e1
variant carriers: 95

GenotypeQuality
all individuals: 1765
bin: 1.75e1
variant carriers: 106

GenotypeQuality
all individuals: 2025
bin: 7.5e0
variant carriers: 139

GenotypeQuality
all individuals: 1915
bin: 4.25e1
variant carriers: 67

GenotypeQuality
all individuals: 1314
bin: 8.25e1
variant carriers: 38

GenotypeQuality
all individuals: 1898
bin: 5.75e1
variant carriers: 76

GenotypeQuality
all individuals: 1563
bin: 7.25e1
variant carriers: 46

GenotypeQuality
all individuals: 1899
bin: 5.25e1
variant carriers: 68

GenotypeQuality
all individuals: 23658
bin: 9.75e1
variant carriers: 211

East Asian
type: Population
allele count: 110
allele frequency: 1.615746180963572e-2
allele num: 6808
num of homozygotes: 0

Latino
type: Population
allele count: 110
allele frequency: 1.225217197594119e-2
allele num: 8978
num of homozygotes: 0

South Asian
type: Population
allele count: 115
allele frequency: 8.6271567891973e-3
allele num: 13330
num of homozygotes: 0

African
type: Population
allele count: 133
allele frequency: 1.696861444245981e-2
allele num: 7838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 56
allele frequency: 1.062215477996965e-2
allele num: 5272
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 5.571030640668524e-3
allele num: 718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 553
allele frequency: 1.072828153493966e-2
allele num: 51546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.063e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.031e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.469352e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 9.57e0

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.587253414264037e-4
allele num: 5272
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.125281320330082e-3
allele num: 13330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 44
allele frequency: 8.536064874093043e-4
allele num: 51546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.063e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

QD
type: SiteQuality
SIO_000300: 9.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.031e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 1.469352e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2