11-6589982-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6589982
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6589982
    reference: chr 11
allele count: 1
allele frequency: 8.606888953918716e-6
allele num: 116186
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2189A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2773A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12749A>G
  hgvsp: ENSP00000254579.6:p.Gln4250Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.48A>G
  hgvsp: ENSP00000464173.1:p.Gln17Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12749A>G
  hgvsp: ENSP00000436180.2:p.Gln4250Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1832A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.910A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9469A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2955A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21008
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln4250Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

11-6589995-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6589995
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6589995
    reference: chr 11
allele count: 1
allele frequency: 8.705038476270064e-6
allele num: 114876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1845C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12762C>T
  hgvsp: ENST00000254579.6:c.12762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.61C>T
  hgvsp: ENST00000527143.1:c.61C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12762C>T
  hgvsp: ENST00000527990.2:c.12762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2968C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.923C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2202C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2786C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9482C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4487
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr4254Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

11-6590002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590002
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590002
    reference: chr 11
allele count: 1
allele frequency: 8.753807906439301e-6
allele num: 114236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.68C>T
  hgvsp: ENSP00000464173.1:p.Pro24Ser
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.930C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12769C>T
  hgvsp: ENSP00000436180.2:p.Pro4257Ser
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2793C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1852C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9489C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12769C>T
  hgvsp: ENSP00000254579.6:p.Pro4257Ser
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2209C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2975C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro4257Ser
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/11-6590003-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590003
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590003
    reference: chr 11
allele count: 56
allele frequency: 4.9044507890911e-4
allele num: 114182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.931C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2976C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9490C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12770C>A
  hgvsp: ENSP00000436180.2:p.Pro4257His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.69C>A
  hgvsp: ENSP00000464173.1:p.Pro24His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1853C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2210C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2794C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12770C>A
  hgvsp: ENSP00000254579.6:p.Pro4257His
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19832
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22030
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro4257His
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

11-6590006-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590006
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590006
    reference: chr 11
allele count: 1
allele frequency: 8.776857182979919e-6
allele num: 113936
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12773C>T
  hgvsp: ENSP00000254579.6:p.Pro4258Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2797C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1856C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9493C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2979C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12773C>T
  hgvsp: ENSP00000436180.2:p.Pro4258Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.934C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.72C>T
  hgvsp: ENSP00000464173.1:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2213C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5216
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro4258Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-6590007-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590007
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590007
    reference: chr 11
allele count: 5
allele frequency: 4.394136464302035e-5
allele num: 113788
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12774C>A
  hgvsp: ENST00000254579.6:c.12774C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.935C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9494C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.73C>A
  hgvsp: ENST00000527143.1:c.73C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2798C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2980C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2214C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12774C>A
  hgvsp: ENST00000527990.2:c.12774C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1857C>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22208
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro4258Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

11-6590007-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590007
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590007
    reference: chr 11
allele count: 10
allele frequency: 8.788272928604071e-5
allele num: 113788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2798C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.73C>G
  hgvsp: ENST00000527143.1:c.73C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9494C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12774C>G
  hgvsp: ENST00000254579.6:c.12774C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12774C>G
  hgvsp: ENST00000527990.2:c.12774C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1857C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.935C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2980C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2214C>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19586
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22208
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35398
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro4258Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-6590007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590007
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590007
    reference: chr 11
allele count: 1
allele frequency: 8.78827292860407e-6
allele num: 113788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.935C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12774C>T
  hgvsp: ENST00000527990.2:c.12774C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.73C>T
  hgvsp: ENST00000527143.1:c.73C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2214C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12774C>T
  hgvsp: ENST00000254579.6:c.12774C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2980C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2798C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1857C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9494C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro4258Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

11-6590026-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590026
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590026
    reference: chr 11
allele count: 1
allele frequency: 8.969575200918485e-6
allele num: 111488
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12793C>T
  hgvsp: ENSP00000254579.6:p.Leu4265Phe
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12793C>T
  hgvsp: ENSP00000436180.2:p.Leu4265Phe
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9513C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2233C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.954C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2817C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.92C>T
  hgvsp: ENSP00000464173.1:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1876C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.2999C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22926
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7705
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu4265Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

11-6590028-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590028
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590028
    reference: chr 11
allele count: 1
allele frequency: 8.999766006083841e-6
allele num: 111114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2235C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12795C>G
  hgvsp: ENST00000527990.2:c.12795C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9515C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.94C>G
  hgvsp: ENST00000527143.1:c.94C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.956C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1878C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12795C>G
  hgvsp: ENST00000254579.6:c.12795C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2819C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3001C>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu4265Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-6590037-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590037
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590037
    reference: chr 11
allele count: 2
allele frequency: 1.828922581707116e-5
allele num: 109354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9524T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2244T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12804T>C
  hgvsp: ENST00000527990.2:c.12804T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.965T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1887T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3010T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12804T>C
  hgvsp: ENST00000254579.6:c.12804T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2828T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.103T>C
  hgvsp: ENST00000527143.1:c.103T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His4268His
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

11-6590043-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590043
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590043
    reference: chr 11
allele count: 1
allele frequency: 9.3463184851487e-6
allele num: 106994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12810C>T
  hgvsp: ENST00000527990.2:c.12810C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9530C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12810C>T
  hgvsp: ENST00000254579.6:c.12810C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1893C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3016C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.109C>T
  hgvsp: ENST00000527143.1:c.109C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2834C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.971C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2250C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17506
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu4270Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

11-6590050-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590050
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590050
    reference: chr 11
allele count: 2
allele frequency: 1.910986260008791e-5
allele num: 104658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.978C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2257C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12817C>T
  hgvsp: ENSP00000436180.2:p.His4273Tyr
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12817C>T
  hgvsp: ENSP00000254579.6:p.His4273Tyr
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2841C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3023C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.116C>T
  hgvsp: ENSP00000464173.1:p.His40Tyr
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1900C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9537C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His4273Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

11-6590053-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590053
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590053
    reference: chr 11
allele count: 1
allele frequency: 9.66239588768431e-6
allele num: 103494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12820C>G
  hgvsp: ENSP00000436180.2:p.Arg4274Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2844C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3026C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12820C>G
  hgvsp: ENSP00000254579.6:p.Arg4274Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9540C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2260C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.119C>G
  hgvsp: ENSP00000464173.1:p.Arg41Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1903C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.981C>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg4274Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

11-6590053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590053
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590053
    reference: chr 11
allele count: 3
allele frequency: 2.898718766305293e-5
allele num: 103494
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12820C>T
  hgvsp: ENSP00000254579.6:p.Arg4274Trp
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2844C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1903C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3026C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.119C>T
  hgvsp: ENSP00000464173.1:p.Arg41Trp
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12820C>T
  hgvsp: ENSP00000436180.2:p.Arg4274Trp
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9540C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.981C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2260C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3564
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg4274Trp
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-6590054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590054
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590054
    reference: chr 11
allele count: 4
allele frequency: 3.88507935274578e-5
allele num: 102958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.120G>A
  hgvsp: ENSP00000464173.1:p.Arg41Gln
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12821G>A
  hgvsp: ENSP00000254579.6:p.Arg4274Gln
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2261G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12821G>A
  hgvsp: ENSP00000436180.2:p.Arg4274Gln
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.982G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9541G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3027G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1904G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2845G>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8413
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19162
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg4274Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-6590055-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590055
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590055
    reference: chr 11
allele count: 3
allele frequency: 2.929058210150163e-5
allele num: 102422
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12822G>A
  hgvsp: ENST00000254579.6:c.12822G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.983G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3028G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12822G>A
  hgvsp: ENST00000527990.2:c.12822G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1905G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2846G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9542G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2262G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.121G>A
  hgvsp: ENST00000527143.1:c.121G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18871
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15401
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg4274Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

11-6590064-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590064
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590064
    reference: chr 11
allele count: 1
allele frequency: 1.009081735620585e-5
allele num: 99100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12831T>C
  hgvsp: ENST00000527990.2:c.12831T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.992T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2271T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12831T>C
  hgvsp: ENST00000254579.6:c.12831T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1914T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2855T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3037T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.130T>C
  hgvsp: ENST00000527143.1:c.130T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9551T>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17528
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr4277Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

11-6590065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590065
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590065
    reference: chr 11
allele count: 4
allele frequency: 4.061655937125566e-5
allele num: 98482
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12832G>A
  hgvsp: ENSP00000254579.6:p.Gly4278Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9552G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.131G>A
  hgvsp: ENSP00000464173.1:p.Gly45Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.993G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2856G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12832G>A
  hgvsp: ENSP00000436180.2:p.Gly4278Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1915G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3038G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2272G>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17193
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13838
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10638
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Gly4278Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

11-6590066-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590066
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590066
    reference: chr 11
allele count: 2
allele frequency: 2.053177291859152e-5
allele num: 97410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.132G>C
  hgvsp: ENSP00000464173.1:p.Gly45Ala
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12833G>C
  hgvsp: ENSP00000436180.2:p.Gly4278Ala
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12833G>C
  hgvsp: ENSP00000254579.6:p.Gly4278Ala
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2273G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.994G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1916G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2857G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3039G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9553G>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly4278Ala
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

11-6590068-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590068
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590068
    reference: chr 11
allele count: 2
allele frequency: 2.070393374741201e-5
allele num: 96600
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12835A>G
  hgvsp: ENSP00000254579.6:p.Thr4279Ala
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1918A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3041A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2275A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9555A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2859A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12835A>G
  hgvsp: ENSP00000436180.2:p.Thr4279Ala
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.996A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.134A>G
  hgvsp: ENSP00000464173.1:p.Thr46Ala
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13109
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25246
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr4279Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-6590085-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590085
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590083
    reference: chr 11
allele count: 2
allele frequency: 2.316906466485948e-5
allele num: 86322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3059_3060delAG
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2293_2294delAG
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.152_153delAG
  hgvsp: ENSP00000464173.1:p.Arg52GlyfsTer23
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12853_12854delAG
  hgvsp: ENSP00000436180.2:p.Arg4285GlyfsTer23
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2877_2878delAG
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12853_12854delAG
  hgvsp: ENSP00000254579.6:p.Arg4285GlyfsTer23
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9573_2742+9574delAG
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1014_1015delAG
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1936_1937delAG
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17034
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg4285GlyfsTer23
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: CAG
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

11-6590092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590092
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590092
    reference: chr 11
allele count: 17
allele frequency: 2.085173192032185e-4
allele num: 81528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12859C>T
  hgvsp: ENSP00000436180.2:p.Arg4287Cys
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1942C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12859C>T
  hgvsp: ENSP00000254579.6:p.Arg4287Cys
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2883C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2299C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3065C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.158C>T
  hgvsp: ENSP00000464173.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1020C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9579C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17488
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18916
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8689
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1525
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg4287Cys
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-6590093-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590093
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590093
    reference: chr 11
allele count: 1
allele frequency: 1.251063403893309e-5
allele num: 79932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1021G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12860G>A
  hgvsp: ENSP00000436180.2:p.Arg4287His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2300G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3066G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.159G>A
  hgvsp: ENSP00000464173.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2884G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9580G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12860G>A
  hgvsp: ENSP00000254579.6:p.Arg4287His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1943G>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17951
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg4287His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

11-6590094-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590094
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590094
    reference: chr 11
allele count: 1
allele frequency: 1.249531425715357e-5
allele num: 80030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9581C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2885C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2301C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.160C>T
  hgvsp: ENST00000527143.1:c.160C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1022C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3067C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12861C>T
  hgvsp: ENST00000254579.6:c.12861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1944C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12861C>T
  hgvsp: ENST00000527990.2:c.12861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12278
  bin: 6.25e1
  variant carriers: 0
hgvs: c.12861C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/11-6590104-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590104
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590105
    reference: chr 11
allele count: 4
allele frequency: 5.415064710023285e-5
allele num: 73868
alternate allele: AC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9596dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+13dupC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+13dupC
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22005
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19821
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3260
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-6590104-A-ACCCCCAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590104
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590111
    reference: chr 11
allele count: 8
allele frequency: 1.083012942004657e-4
allele num: 73868
alternate allele: ACCCCCAC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+11_3069+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+11_2303+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+11_12863+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+11_1946+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+11_162+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+11_12863+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+11_2887+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+11_1024+17dupCCCACCC
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22005
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19821
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4461
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3260
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/11-6590104-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590104
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590103
    reference: chr 11
allele count: 1
allele frequency: 1.353766177505821e-5
allele num: 73868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+13delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9596delC
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19821
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3260
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: AC
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-6590109-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590109
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590109
    reference: chr 11
allele count: 42
allele frequency: 5.870020964360587e-4
allele num: 71550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9596C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+13C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+13C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 20432
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22538
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4599
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6556
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

11-6590121-CTCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590121
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590117
    reference: chr 11
allele count: 9
allele frequency: 1.433805958260316e-4
allele num: 62770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+29_2303+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+29_2887+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+29_1024+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9612_2742+9615delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+29_12863+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+29_3069+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+29_162+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+29_12863+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+29_1946+32delGTCA
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21699
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22381
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4431
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30889
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: CTCAG
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

11-6590129-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590129
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590129
    reference: chr 11
allele count: 6
allele frequency: 1.063565781543588e-4
allele num: 56414
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+33A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9616A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+33A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23422
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20247
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4558
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

11-6590135-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590135
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590135
    reference: chr 11
allele count: 1
allele frequency: 1.932890057213546e-5
allele num: 51736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9622C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+39C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+39C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5077
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-6590135-CAACA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590135
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590131
    reference: chr 11
allele count: 18
allele frequency: 3.479202102984382e-4
allele num: 51736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+44_162+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+44_1024+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+44_3069+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+44_12863+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+44_1946+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9627_2742+9630delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+44_2303+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+44_2887+47delAACA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+44_12863+47delAACA
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25208
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18342
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 8297
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23772
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: CAACA
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

11-6590137-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6590137
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6590137
    reference: chr 11
allele count: 8
allele frequency: 1.614139865219321e-4
allele num: 49562
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3069+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2303+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1946+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2887+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+9624A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12863+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12863+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.162+41A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1024+41A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17234
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8350
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26322
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5823
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6330
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 9.75e1
  variant carriers: 8
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

11-6591196-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591196
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591196
    reference: chr 11
allele count: 2
allele frequency: 1.688162603822e-5
allele num: 118472
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12864-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3070-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2304-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12864-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2888-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1025-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1947-43A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10683A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.163-43A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8302
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

11-6591197-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591197
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591197
    reference: chr 11
allele count: 4
allele frequency: 3.376439207212074e-5
allele num: 118468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2888-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1025-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.163-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1947-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12864-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10684T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3070-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12864-42T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2304-42T>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16081
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35564
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-6591206-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591206
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591206
    reference: chr 11
allele count: 2
allele frequency: 1.685090320841197e-5
allele num: 118688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2304-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1947-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1025-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2888-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12864-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10693T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3070-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12864-33T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.163-33T>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26370
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37655
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-6591207-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591207
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591207
    reference: chr 11
allele count: 1
allele frequency: 8.422471153036301e-6
allele num: 118730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2888-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3070-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1947-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.163-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10694G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12864-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12864-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2304-32G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1025-32G>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

11-6591223-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591223
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591223
    reference: chr 11
allele count: 152
allele frequency: 1.26948068217883e-3
allele num: 119734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3070-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2888-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12864-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.163-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2304-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1025-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10710C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1947-16C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12864-16C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19180
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 27203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8547
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40009
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

11-6591253-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591253
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591253
    reference: chr 11
allele count: 1
allele frequency: 8.289399515899069e-6
allele num: 120636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1039T>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2318T>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.177T>G
  hgvsp: ENSP00000464173.1:p.Leu60Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1961T>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3084T>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12878T>G
  hgvsp: ENSP00000436180.2:p.Leu4293Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10740T>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12878T>G
  hgvsp: ENSP00000254579.6:p.Leu4293Arg
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2902T>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu4293Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-6591258-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591258
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591258
    reference: chr 11
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10745C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1966C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3089C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2323C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.182C>G
  hgvsp: ENSP00000464173.1:p.Gln62Glu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12883C>G
  hgvsp: ENSP00000254579.6:p.Gln4295Glu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2907C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1044C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12883C>G
  hgvsp: ENSP00000436180.2:p.Gln4295Glu
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40984
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln4295Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-6591260-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591260
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591260
    reference: chr 11
allele count: 150
allele frequency: 1.242832996387499e-3
allele num: 120692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1968G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12885G>A
  hgvsp: ENST00000254579.6:c.12885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10747G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.184G>A
  hgvsp: ENST00000527143.1:c.184G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2909G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12885G>A
  hgvsp: ENST00000527990.2:c.12885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1046G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2325G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3091G>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 19457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 9.75e1
  variant carriers: 150
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln4295Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

11-6591260-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591260
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591260
    reference: chr 11
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1046G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10747G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12885G>C
  hgvsp: ENSP00000254579.6:p.Gln4295His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3091G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.184G>C
  hgvsp: ENSP00000464173.1:p.Gln62His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2909G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12885G>C
  hgvsp: ENSP00000436180.2:p.Gln4295His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1968G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2325G>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9432
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln4295His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-6591270-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591270
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591269
    reference: chr 11
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10760delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2922delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1059delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1981delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12898delC
  hgvsp: ENSP00000436180.2:p.Gln4300LysfsTer37
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2338delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3104delC
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12898delC
  hgvsp: ENSP00000254579.6:p.Gln4300LysfsTer37
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.197delC
  hgvsp: ENSP00000464173.1:p.Gln67LysfsTer?
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9473
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln4300LysfsTer37
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: AC
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

11-6591278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591278
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591278
    reference: chr 11
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.202C>T
  hgvsp: ENST00000527143.1:c.202C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2343C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12903C>T
  hgvsp: ENST00000527990.2:c.12903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2927C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3109C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1064C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12903C>T
  hgvsp: ENST00000254579.6:c.12903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1986C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10765C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp4301Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

11-6591289-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591289
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591289
    reference: chr 11
allele count: 2
allele frequency: 1.656259834042764e-5
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2938C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12914C>T
  hgvsp: ENSP00000436180.2:p.Ala4305Val
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1075C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10776C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2354C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.1997C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.213C>T
  hgvsp: ENSP00000464173.1:p.Ala72Val
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12914C>T
  hgvsp: ENSP00000254579.6:p.Ala4305Val
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3120C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala4305Val
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

11-6591293-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591293
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591293
    reference: chr 11
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2942T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2358T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1079T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.217T>C
  hgvsp: ENST00000527143.1:c.217T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12918T>C
  hgvsp: ENST00000254579.6:c.12918T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3124T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12918T>C
  hgvsp: ENST00000527990.2:c.12918T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10780T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2001T>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9477
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser4306Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP

11-6591296-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591296
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591296
    reference: chr 11
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2004T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2945T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.220T>C
  hgvsp: ENST00000527143.1:c.220T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12921T>C
  hgvsp: ENST00000254579.6:c.12921T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10783T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12921T>C
  hgvsp: ENST00000527990.2:c.12921T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1082T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3127T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2361T>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu4307Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

11-6591297-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591297
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591297
    reference: chr 11
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.221A>G
  hgvsp: ENSP00000464173.1:p.Ser75Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3128A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12922A>G
  hgvsp: ENSP00000436180.2:p.Ser4308Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10784A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2362A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2005A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12922A>G
  hgvsp: ENSP00000254579.6:p.Ser4308Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1083A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2946A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser4308Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

11-6591300-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591300
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591300
    reference: chr 11
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10787A>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2365A>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2949A>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1086A>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.224A>T
  hgvsp: ENSP00000464173.1:p.Asn76Tyr
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12925A>T
  hgvsp: ENSP00000254579.6:p.Asn4309Tyr
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2008A>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3131A>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12925A>T
  hgvsp: ENSP00000436180.2:p.Asn4309Tyr
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn4309Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-6591304-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591304
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591304
    reference: chr 11
allele count: 3
allele frequency: 2.484430899695243e-5
allele num: 120752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.228C>T
  hgvsp: ENSP00000464173.1:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12929C>T
  hgvsp: ENSP00000254579.6:p.Pro4310Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10791C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2012C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12929C>T
  hgvsp: ENSP00000436180.2:p.Pro4310Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2953C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1090C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2369C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3135C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9471
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro4310Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-6591306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591306
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591306
    reference: chr 11
allele count: 128
allele frequency: 1.060041407867495e-3
allele num: 120750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10793C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2014C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.230C>T
  hgvsp: ENSP00000464173.1:p.Arg78Cys
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3137C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12931C>T
  hgvsp: ENSP00000254579.6:p.Arg4311Cys
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12931C>T
  hgvsp: ENSP00000436180.2:p.Arg4311Cys
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2371C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2955C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1092C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 27839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg4311Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

11-6591307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591307
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591307
    reference: chr 11
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10794G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12932G>A
  hgvsp: ENSP00000436180.2:p.Arg4311His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1093G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12932G>A
  hgvsp: ENSP00000254579.6:p.Arg4311His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2372G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2015G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.231G>A
  hgvsp: ENSP00000464173.1:p.Arg78His
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2956G>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3138G>A
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg4311His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-6591307-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591307
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591307
    reference: chr 11
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1093G>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2015G>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.231G>T
  hgvsp: ENSP00000464173.1:p.Arg78Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2956G>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12932G>T
  hgvsp: ENSP00000436180.2:p.Arg4311Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2372G>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12932G>T
  hgvsp: ENSP00000254579.6:p.Arg4311Leu
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10794G>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3138G>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg4311Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

11-6591308-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591308
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591308
    reference: chr 11
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12933T>C
  hgvsp: ENST00000254579.6:c.12933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3139T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2373T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10795T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12933T>C
  hgvsp: ENST00000527990.2:c.12933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.232T>C
  hgvsp: ENST00000527143.1:c.232T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2016T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1094T>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2957T>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg4311Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

11-6591311-T-TAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591311
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591313
    reference: chr 11
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: TAA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2019_2020insAA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1097_1098insAA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2376_2377insAA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12936_12937insAA
  hgvsp: ENSP00000254579.6:p.Ala4313LysfsTer25
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10798_2742+10799insAA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12936_12937insAA
  hgvsp: ENSP00000436180.2:p.Ala4313LysfsTer25
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.235_236insAA
  hgvsp: ENSP00000464173.1:p.Ala80LysfsTer?
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2960_2961insAA
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3142_3143insAA
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala4313LysfsTer25
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

11-6591315-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591315
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591314
    reference: chr 11
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.240delT
  hgvsp: ENSP00000464173.1:p.Met81SerfsTer?
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2965delT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2024delT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12941delT
  hgvsp: ENSP00000254579.6:p.Met4314SerfsTer23
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1102delT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10803delT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2381delT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12941delT
  hgvsp: ENSP00000436180.2:p.Met4314SerfsTer23
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3147delT
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met4314SerfsTer23
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: AT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

11-6591320-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591320
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591320
    reference: chr 11
allele count: 3
allele frequency: 2.484430899695243e-5
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2969A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10807A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1106A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2028A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2385A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.244A>G
  hgvsp: ENST00000527143.1:c.244A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12945A>G
  hgvsp: ENST00000254579.6:c.12945A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12945A>G
  hgvsp: ENST00000527990.2:c.12945A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3151A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln4315Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

11-6591324-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591324
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591324
    reference: chr 11
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12949C>T
  hgvsp: ENST00000254579.6:c.12949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.248C>T
  hgvsp: ENST00000527143.1:c.248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2389C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1110C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2973C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2032C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3155C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12949C>T
  hgvsp: ENST00000527990.2:c.12949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10811C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41108
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu4317Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-6591328-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591328
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591328
    reference: chr 11
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2036C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10815C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2393C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3159C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.252C>G
  hgvsp: ENSP00000464173.1:p.Ala85Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12953C>G
  hgvsp: ENSP00000436180.2:p.Ala4318Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12953C>G
  hgvsp: ENSP00000254579.6:p.Ala4318Gly
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2977C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1114C>G
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala4318Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

11-6591335-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591335
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591335
    reference: chr 11
allele count: 3
allele frequency: 2.485954357877989e-5
allele num: 120678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10822G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2984G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+5G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1121G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+5G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+5G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2400G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+5G>C
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+5G>C
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: c.12955+5G>C
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

11-6591337-CCCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591337
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591333
    reference: chr 11
allele count: 1
allele frequency: 8.288987251537607e-6
allele num: 120642
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+11_254+14delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+11_12955+14delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+11_2038+14delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1127_1130delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+11_12955+14delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10828_2742+10831delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2406_2409delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+11_3161+14delTCCT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2990_2993delTCCT
  variant of: http://identifiers.org/hgnc/26532
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
hgvs: c.12955+11_12955+14delTCCT
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: CCCTT
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

11-6591345-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591345
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591346
    reference: chr 11
allele count: 3
allele frequency: 2.487644697999934e-5
allele num: 120596
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+16dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1132dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+16dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+16dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2995dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+16dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2411dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10833dupT
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+16dupT
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27859
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40769
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

11-6591347-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591347
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591347
    reference: chr 11
allele count: 1
allele frequency: 8.292974192264313e-6
allele num: 120584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10834C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1133C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+17C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2996C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+17C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+17C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2412C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+17C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+17C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

11-6591349-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591349
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591349
    reference: chr 11
allele count: 1
allele frequency: 8.296001327360212e-6
allele num: 120540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10836C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+19C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2414C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1135C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2998C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+19C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+19C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+19C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+19C>G
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-6591350-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591350
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591350
    reference: chr 11
allele count: 1
allele frequency: 8.296001327360212e-6
allele num: 120540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10837C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+20C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1136C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2999C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+20C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+20C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+20C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2415C>A
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+20C>A
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

11-6591350-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591350
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591350
    reference: chr 11
allele count: 37
allele frequency: 3.069520491123278e-4
allele num: 120540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2415C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2999C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1136C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+20C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+20C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+20C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+20C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+20C>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10837C>G
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27832
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19114
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 9.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 40664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-6591350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591350
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591350
    reference: chr 11
allele count: 1
allele frequency: 8.296001327360212e-6
allele num: 120540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.2999C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10837C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+20C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+20C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1136C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2415C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+20C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+20C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+20C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

11-6591351-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591351
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591351
    reference: chr 11
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+21C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.3000C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10838C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1137C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2416C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+21C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+21C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+21C>T
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+21C>T
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

11-6591360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6591360
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 6591360
    reference: chr 11
allele count: 1
allele frequency: 8.309512730173502e-6
allele num: 120344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000436180
  ensembl transcript: ENST00000527990
  gene symbol: DNHD1
  hgvsc: ENST00000527990.2:c.12955+30A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000525883
  gene symbol: DNHD1
  hgvsc: ENST00000525883.1:n.2425A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000532467
  gene symbol: DNHD1
  hgvsc: ENST00000532467.1:n.1146A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000533635
  gene symbol: DNHD1
  hgvsc: ENST00000533635.1:n.3009A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000254579
  ensembl transcript: ENST00000254579
  gene symbol: DNHD1
  hgvsc: ENST00000254579.6:c.12955+30A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000530197
  gene symbol: DNHD1
  hgvsc: ENST00000530197.1:n.2038+30A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000534210
  gene symbol: DNHD1
  hgvsc: ENST00000534210.2:n.2742+10847A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl protein: ENSP00000464173
  ensembl transcript: ENST00000527143
  gene symbol: DNHD1
  hgvsc: ENST00000527143.1:c.254+30A>G
  variant of: http://identifiers.org/hgnc/26532
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179532
  ensembl transcript: ENST00000529821
  gene symbol: DNHD1
  hgvsc: ENST00000529821.1:n.3161+30A>G
  variant of: http://identifiers.org/hgnc/26532
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4473
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36434
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548850752741466e-5
allele num: 64564
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.617e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.422e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.488495e6

FS
type: SiteQuality
SIO_000300: 7.384e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.499e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.499e0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 205
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5453
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.199328376109379e-4
allele num: 8338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.083e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.883e1

DP
type: SiteQuality
SIO_000300: 1.463363e6

VQSLOD
type: SiteQuality
SIO_000300: -1.344e0

GenotypeQuality
all individuals: 857
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5260
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35717
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573217544522056e-5
allele num: 63564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11010
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.634e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

MQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

DP
type: SiteQuality
SIO_000300: 1.454497e6

QD
type: SiteQuality
SIO_000300: 1.29e1

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5810
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 9.75e1
variant carriers: 55

GenotypeQuality
all individuals: 424
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.095870474804439e-5
allele num: 10994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15124
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.199040767386091e-3
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 53
allele frequency: 5.882352941176471e-3
allele num: 9010
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573762236001385e-5
allele num: 63542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.453428e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.387e0

VQSLOD
type: SiteQuality
SIO_000300: 5.46e0

QD
type: SiteQuality
SIO_000300: 1.259e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35854
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6041
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1061
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10986
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.210653753026634e-4
allele num: 8260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.375e1

VQSLOD
type: SiteQuality
SIO_000300: -1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

FS
type: SiteQuality
SIO_000300: 1.2187e1

MQRankSum
type: SiteQuality
SIO_000300: -1.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

DP
type: SiteQuality
SIO_000300: 1.447014e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1521
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35398
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1427
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.640106241699867e-5
allele num: 15060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.157662067005589e-5
allele num: 63338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.199040767386091e-3
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.116569897275569e-4
allele num: 8956
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.655e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.444881e6

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
all individuals: 5200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 132
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.315324134011178e-5
allele num: 63338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8956
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.640997633351538e-4
allele num: 10986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.328021248339973e-4
allele num: 15060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.29e1

DP
type: SiteQuality
SIO_000300: 1.444881e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.655e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.102494083378845e-5
allele num: 10986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.655e0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.29e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.444881e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10808
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.151543067710732e-4
allele num: 8684
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.547e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.81e-1

DP
type: SiteQuality
SIO_000300: 1.419296e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

QD
type: SiteQuality
SIO_000300: 9.67e0

GenotypeQuality
all individuals: 738
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
all individuals: 7970
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615926572296555e-5
allele num: 61884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 2.398e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.788e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.682e1

VQSLOD
type: SiteQuality
SIO_000300: -9.320000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.414737e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.423294383716548e-5
allele num: 10612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6136
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.39049e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeQuality
all individuals: 230
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1137
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variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14174
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.746e1

MQRankSum
type: SiteQuality
SIO_000300: -1.953e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.859e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.646e1

VQSLOD
type: SiteQuality
SIO_000300: -1.461e0

DP
type: SiteQuality
SIO_000300: 1.358609e6

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 758
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GenotypeQuality
all individuals: 281
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.430414050975953e-5
allele num: 58302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.811e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 8.039999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e0

DP
type: SiteQuality
SIO_000300: 1.324274e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57664
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.286505392013991e-5
allele num: 13724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 5.338e0

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-2

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 1.308378e6

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 273
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GenotypeQuality
all individuals: 140
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GenotypeQuality
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GenotypeQuality
all individuals: 1839
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GenotypeQuality
all individuals: 13646
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.653223666755107e-4
allele num: 7538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.286505392013991e-5
allele num: 13724
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-2

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.338e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 1.308378e6

MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 346
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GenotypeQuality
all individuals: 588
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GenotypeQuality
all individuals: 679
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GenotypeQuality
all individuals: 897
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GenotypeQuality
all individuals: 1880
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GenotypeQuality
all individuals: 1161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 2
allele frequency: 2.668801708033093e-4
allele num: 7494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.744591765526867e-5
allele num: 57320
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.261034047919294e-4
allele num: 7930
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

QD
type: SiteQuality
SIO_000300: 1.252e1

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

DP
type: SiteQuality
SIO_000300: 1.301426e6

FS
type: SiteQuality
SIO_000300: 3.768e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56986
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5754
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.19941348973607e-4
allele num: 13640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

DP
type: SiteQuality
SIO_000300: 1.290432e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.809e0

QD
type: SiteQuality
SIO_000300: 1.42e1

GenotypeQuality
all individuals: 130
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.818446319464649e-5
allele num: 54992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13354
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.239241e6

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.054e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.671e0

FS
type: SiteQuality
SIO_000300: 9.361000000000001e0

QD
type: SiteQuality
SIO_000300: 7.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 687
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7596
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.191993292810731e-4
allele num: 9542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13310
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.67e-1

FS
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.23183e6

GenotypeQuality
all individuals: 235
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 136
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53978
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.11864406779661e-4
allele num: 9440
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

FS
type: SiteQuality
SIO_000300: 7.89e-1

DP
type: SiteQuality
SIO_000300: 1.214439e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.283e0

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.692762186115214e-4
allele num: 5416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7422
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.200026e6

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

FS
type: SiteQuality
SIO_000300: 4.678e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.313e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.203093476798924e-5
allele num: 47584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

FS
type: SiteQuality
SIO_000300: 1.269e0

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

DP
type: SiteQuality
SIO_000300: 1.039571e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.38e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1413
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variant carriers: 15

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 9
allele frequency: 1.165501165501166e-3
allele num: 7722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.761183515322297e-4
allele num: 11356
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.585791309863622e-4
allele num: 6306
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.692620176032498e-4
allele num: 5908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.896005693443644e-5
allele num: 44964
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4672
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.69596e5

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.3755e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 11746
bin: 6.25e1
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GenotypeQuality
all individuals: 29522
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.267573696145125e-5
allele num: 44100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.509e0

DP
type: SiteQuality
SIO_000300: 9.48003e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: -4.53e-2

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.266134880348078e-5
allele num: 44128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

QD
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SIO_000300: 2.117e1

MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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SIO_000300: 9.45383e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.326e0

VQSLOD
type: SiteQuality
SIO_000300: -2.89e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.813061184436484e-5
allele num: 40762
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -2.008e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

FS
type: SiteQuality
SIO_000300: 2.752e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.52854e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.397e0

MQ
type: SiteQuality
SIO_000300: 5.642e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 9.856100926473487e-5
allele num: 10146
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 1.213592233009709e-3
allele num: 5768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40762
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.52854e5

MQ
type: SiteQuality
SIO_000300: 5.642e1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.752e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.008e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.397e0

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5332
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.856100926473487e-5
allele num: 10146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.752e0

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

DP
type: SiteQuality
SIO_000300: 8.52854e5

MQRankSum
type: SiteQuality
SIO_000300: -2.008e0

MQ
type: SiteQuality
SIO_000300: 5.642e1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.397e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.070479667376534e-5
allele num: 39444
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.950078003120125e-4
allele num: 5128
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 3.972295783255245e-3
allele num: 9818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6694
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.24006e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.09e-2

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.647e0

BaseQRankSum
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SIO_000300: -1.666e0

QD
type: SiteQuality
SIO_000300: 1.387e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8676
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 8.552856654122477e-4
allele num: 5846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 1.160227404571296e-4
allele num: 34476
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 486
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QD
type: SiteQuality
SIO_000300: 1.195e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.62e-2

ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 3.238761497603316e-5
allele num: 30876
num of homozygotes: 0

African
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allele frequency: 8.718395815170009e-4
allele num: 4588
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Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele frequency: 1.2465719272002e-4
allele num: 8022
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Latino
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.326663564448581e-4
allele num: 4298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 28278
num of homozygotes: 0

Latino
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allele num: 4636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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InbreedingCoeff
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SIO_000300: 2.13e-2

ClippingRankSum
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
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QD
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ReadPosRankSum
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DP
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VQSLOD
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 35

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 5.304476978569913e-4
allele num: 28278
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.314063848144953e-4
allele num: 4636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3272
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.326663564448581e-4
allele num: 4298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

MQ
type: SiteQuality
SIO_000300: 5.521e1

DP
type: SiteQuality
SIO_000300: 6.68269e5

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 79
bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21075
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.694945314809341e-5
allele num: 27064
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 1.673840267814443e-3
allele num: 4182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3146
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

FS
type: SiteQuality
SIO_000300: 2.055e0

QD
type: SiteQuality
SIO_000300: 1.383e1

DP
type: SiteQuality
SIO_000300: 6.58175e5

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.25e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1183
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 2.25e1
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GenotypeQuality
all individuals: 2502
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.599788806758183e-5
allele num: 15152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65932
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.67e-1

DP
type: SiteQuality
SIO_000300: 1.584505e6

QD
type: SiteQuality
SIO_000300: 1.575e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 629
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 139
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 469
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.637478570486615e-4
allele num: 15166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

QD
type: SiteQuality
SIO_000300: 1.585e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

FS
type: SiteQuality
SIO_000300: 1.094e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.58674e6

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9039
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66004
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.309071868045556e-4
allele num: 15278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.604914e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

QD
type: SiteQuality
SIO_000300: 1.135e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 575
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variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514738404677512e-5
allele num: 66018
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.55e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.976e0

VQSLOD
type: SiteQuality
SIO_000300: -1.356e0

DP
type: SiteQuality
SIO_000300: 1.606786e6

FS
type: SiteQuality
SIO_000300: 2.627e0

QD
type: SiteQuality
SIO_000300: 1.787e1

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2570
bin: 9.75e1
variant carriers: 151

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2372
bin: 7.75e1
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GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 135
allele frequency: 1.37952176578786e-2
allele num: 9786
num of homozygotes: 1

Latino
type: Population
allele count: 4
allele frequency: 3.461405330564209e-4
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.400301734976112e-4
allele num: 15908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.027727546714889e-5
allele num: 66360
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

QD
type: SiteQuality
SIO_000300: 1.528e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 7.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

DP
type: SiteQuality
SIO_000300: 1.638992e6

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2403
bin: 7.75e1
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GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.99e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 1.647374e6

FS
type: SiteQuality
SIO_000300: 2.368e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.705e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.336e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.174e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 9444
bin: 6.75e1
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GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.647942e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.554e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.059e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

GenotypeQuality
all individuals: 40973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.040816326530612e-4
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.559721802237678e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 135
allele frequency: 2.024048697112357e-3
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.640776699029126e-4
allele num: 16480
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.516e0

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 1.164e0

QD
type: SiteQuality
SIO_000300: 1.256e1

DP
type: SiteQuality
SIO_000300: 1.658871e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 1.164e0

QD
type: SiteQuality
SIO_000300: 1.256e1

DP
type: SiteQuality
SIO_000300: 1.658871e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.516e0

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.025e1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

DP
type: SiteQuality
SIO_000300: 1.647473e6

QD
type: SiteQuality
SIO_000300: 3.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41098
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variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 1.647764e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.082e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.744e0

MQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.52e-1

QD
type: SiteQuality
SIO_000300: 1.519e1

VQSLOD
type: SiteQuality
SIO_000300: -1.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2770
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.647879e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.52e-1

FS
type: SiteQuality
SIO_000300: 6.11e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.771e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -3.319e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.647821e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.902e1

DP
type: SiteQuality
SIO_000300: 1.647844e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.981e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.647767e6

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.559e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.094e1

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
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VQSLOD
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QD
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FS
type: SiteQuality
SIO_000300: 1.794e0

BaseQRankSum
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SIO_000300: -2.058e0

MQRankSum
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SIO_000300: 1.18e0

InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.402e0

DP
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SIO_000300: 1.647821e6

QD
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SIO_000300: 1.057e1

FS
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VQSLOD
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MQRankSum
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MQ
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
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SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 2
allele frequency: 2.2271714922049e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 117
allele frequency: 1.753491996882681e-3
allele num: 66724
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.040816326530612e-4
allele num: 9800
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 6
allele frequency: 9.071666162685213e-4
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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DP
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.3e-2

MQ
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SIO_000300: 5.96e1

ReadPosRankSum
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SIO_000300: 5.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.348e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
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SIO_000300: 2.63e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.647197e6

FS
type: SiteQuality
SIO_000300: 1.675e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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MQ
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.675e0

MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.348e1

ClippingRankSum
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SIO_000300: 2.05e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498666187093487e-5
allele num: 66726
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European (Finnish)
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DP
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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Latino
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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num of homozygotes: 0

Other
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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African
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.347e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 1.646969e6

FS
type: SiteQuality
SIO_000300: 4.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9474
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.646717e6

FS
type: SiteQuality
SIO_000300: 4.553e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.754e0

VQSLOD
type: SiteQuality
SIO_000300: -3.475e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.371e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

QD
type: SiteQuality
SIO_000300: 8.08e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

QD
type: SiteQuality
SIO_000300: 1.303e1

FS
type: SiteQuality
SIO_000300: 1.281e0

VQSLOD
type: SiteQuality
SIO_000300: -1.584e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

DP
type: SiteQuality
SIO_000300: 1.64633e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.846e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499775011249437e-5
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.556e1

FS
type: SiteQuality
SIO_000300: 1.678e0

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 1.645936e6

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.275e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.585e1

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.644737e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.067484662576687e-4
allele num: 9780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

DP
type: SiteQuality
SIO_000300: 1.64294e6

FS
type: SiteQuality
SIO_000300: 5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

MQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.025e1

MQ
type: SiteQuality
SIO_000300: 6.021e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.401e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.652e0

QD
type: SiteQuality
SIO_000300: 1.665e1

DP
type: SiteQuality
SIO_000300: 1.642691e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 542
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.418e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2739
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 37
allele frequency: 4.292343387470998e-3
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

FS
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

QD
type: SiteQuality
SIO_000300: 1.418e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 1.642296e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9397
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1147
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

DP
type: SiteQuality
SIO_000300: 1.642296e6

FS
type: SiteQuality
SIO_000300: 6.7e-1

QD
type: SiteQuality
SIO_000300: 1.418e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40679
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2742
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.174e0

FS
type: SiteQuality
SIO_000300: 4.962e0

MQRankSum
type: SiteQuality
SIO_000300: -1.634e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

QD
type: SiteQuality
SIO_000300: 2.399e1

VQSLOD
type: SiteQuality
SIO_000300: -2.759e0

DP
type: SiteQuality
SIO_000300: 1.640938e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.44e-1