14-68060685-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060685
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060685
    reference: chr 14
allele count: 1
allele frequency: 1.283861856464244e-5
allele num: 77890
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-16C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-16C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-21C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-16C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-16C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-133C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-16C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-16C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-21C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-16C>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/14-68060687-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060687
    reference: chr 14
allele count: 1
allele frequency: 1.297353399065906e-5
allele num: 77080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-23G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-23G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-18G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-135G>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3406
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-68060687-CACAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060683
    reference: chr 14
allele count: 1
allele frequency: 1.297353399065906e-5
allele num: 77080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-22_181-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-22_110-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-22_147-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-22_181-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-22_181-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-27_181-24delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-22_264-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-139_181-136delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-22_181-19delCTGT
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-27_181-24delCTGT
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: CACAG
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

14-68060695-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060695
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060695
    reference: chr 14
allele count: 1
allele frequency: 1.383661722382112e-5
allele num: 72272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-26C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-26C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-31C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-143C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-26C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-26C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-26C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-31C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-26C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-26C>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20296
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

14-68060702-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060702
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060702
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 66228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-38A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-150A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-33A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-38A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-33A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-33A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-33A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-33A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-33A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-33A>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21145
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

14-68060705-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060705
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060705
    reference: chr 14
allele count: 616
allele frequency: 9.408314750893484e-3
allele num: 65474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-153G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-41G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-36G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-41G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 2.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 18051
  bin: 1.25e1
  variant carriers: 331
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 1.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 2.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21437
  bin: 7.5e0
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3665
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 3.75e1
  variant carriers: 5
num of homozygotes: 31
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

14-68060707-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060707
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060707
    reference: chr 14
allele count: 1
allele frequency: 1.541829843658454e-5
allele num: 64858
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-43T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-43T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-38T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-155T>C
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6418
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS

14-68060712-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060712
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060712
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 63502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-48A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-160A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-48A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-43A>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22625
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6551
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-68060714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68060714
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68060714
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 60500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.181-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.181-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.147-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.264-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.181-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.181-162G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.110-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.181-45G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.181-50G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.181-50G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6518
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

14-68066715-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066715
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066715
    reference: chr 14
allele count: 1
allele frequency: 6.866245536940401e-5
allele num: 14564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+26C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

14-68066722-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066722
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066722
    reference: chr 14
allele count: 1
allele frequency: 6.313131313131313e-5
allele num: 15840
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+19C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+19C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

14-68066723-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066723
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066723
    reference: chr 14
allele count: 1
allele frequency: 6.274312962730582e-5
allele num: 15938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+18C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+18C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26498
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20496
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

14-68066728-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066728
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066728
    reference: chr 14
allele count: 12
allele frequency: 6.967022758941013e-4
allele num: 17224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+13C>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26546
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

14-68066730-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066730
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066730
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 17716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+11G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 22695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27529
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21302
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-68066732-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066732
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066732
    reference: chr 14
allele count: 4
allele frequency: 2.221728504776716e-4
allele num: 18004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+9A>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28248
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

14-68066735-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066735
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066735
    reference: chr 14
allele count: 228
allele frequency: 1.204946622978544e-2
allele num: 18922
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.263+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.180+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.109+6G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.146+6G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 29095
  bin: 7.5e0
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 20556
  bin: 2.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 1.25e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.180+6G>A
num of homozygotes: 4
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

14-68066744-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066744
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066744
    reference: chr 14
allele count: 1
allele frequency: 4.857198367981349e-5
allele num: 20588
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.177C>G
  hgvsp: ENSP00000216452.4:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.177C>G
  hgvsp: ENSP00000453733.1:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.177C>G
  hgvsp: ENSP00000454061.1:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.106C>G
  hgvsp: ENSP00000453158.1:p.Cys36Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.260C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.177C>G
  hgvsp: ENSP00000452974.1:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.177C>G
  hgvsp: ENSP00000452924.1:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.177C>G
  hgvsp: ENSP00000452996.1:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.177C>G
  hgvsp: ENSP00000453394.1:p.Cys59Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.143C>G
  hgvsp: ENSP00000453759.1:p.Cys48Trp
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys59Trp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

14-68066756-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066756
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066756
    reference: chr 14
allele count: 9
allele frequency: 3.819709702062643e-4
allele num: 23562
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.165C>A
  hgvsp: ENST00000216452.4:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.165C>A
  hgvsp: ENST00000561303.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.165C>A
  hgvsp: ENST00000559581.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.165C>A
  hgvsp: ENST00000558001.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.165C>A
  hgvsp: ENST00000559415.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.165C>A
  hgvsp: ENST00000560722.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.131C>A
  hgvsp: ENST00000561272.1:c.131C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.94C>A
  hgvsp: ENST00000558493.1:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.165C>A
  hgvsp: ENST00000558198.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.248C>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32845
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14930
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu55Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

14-68066757-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066757
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066757
    reference: chr 14
allele count: 9
allele frequency: 3.790750568612585e-4
allele num: 23742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.164T>A
  hgvsp: ENSP00000452974.1:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.164T>A
  hgvsp: ENSP00000453394.1:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.93T>A
  hgvsp: ENSP00000453158.1:p.Leu32His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.164T>A
  hgvsp: ENSP00000453733.1:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.164T>A
  hgvsp: ENSP00000452996.1:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.164T>A
  hgvsp: ENSP00000454061.1:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.130T>A
  hgvsp: ENSP00000453759.1:p.Leu44His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.164T>A
  hgvsp: ENSP00000452924.1:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.247T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.164T>A
  hgvsp: ENSP00000216452.4:p.Leu55His
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32974
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14774
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu55His
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

14-68066769-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066769
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066769
    reference: chr 14
allele count: 3
allele frequency: 1.237623762376238e-4
allele num: 24240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.118C>G
  hgvsp: ENSP00000453759.1:p.Ala40Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.152C>G
  hgvsp: ENSP00000453394.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.152C>G
  hgvsp: ENSP00000454061.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.152C>G
  hgvsp: ENSP00000216452.4:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.235C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.152C>G
  hgvsp: ENSP00000452996.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.152C>G
  hgvsp: ENSP00000452974.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.152C>G
  hgvsp: ENSP00000452924.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.81C>G
  hgvsp: ENSP00000453158.1:p.Ala28Gly
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.152C>G
  hgvsp: ENSP00000453733.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33099
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala51Gly
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/14-68066780-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066780
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066780
    reference: chr 14
allele count: 642
allele frequency: 1.878291398478642e-2
allele num: 34180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.141G>T
  hgvsp: ENST00000559415.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.141G>T
  hgvsp: ENST00000216452.4:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.141G>T
  hgvsp: ENST00000561303.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.141G>T
  hgvsp: ENST00000558001.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.70G>T
  hgvsp: ENST00000558493.1:c.70G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.141G>T
  hgvsp: ENST00000558198.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.107G>T
  hgvsp: ENST00000561272.1:c.107G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.141G>T
  hgvsp: ENST00000559581.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.141G>T
  hgvsp: ENST00000560722.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.224G>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 34741
  bin: 7.5e0
  variant carriers: 259
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7932
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 1.25e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 2.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 3.75e1
  variant carriers: 7
hgvs: p.Thr47Thr
num of homozygotes: 20
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

14-68066806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066806
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066806
    reference: chr 14
allele count: 1
allele frequency: 2.664677041142613e-5
allele num: 37528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.115C>T
  hgvsp: ENSP00000454061.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.115C>T
  hgvsp: ENSP00000452924.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.81C>T
  hgvsp: ENSP00000453759.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.115C>T
  hgvsp: ENSP00000452974.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.115C>T
  hgvsp: ENSP00000452996.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.115C>T
  hgvsp: ENSP00000453733.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.44C>T
  hgvsp: ENSP00000453158.1:p.Arg16Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.115C>T
  hgvsp: ENSP00000216452.4:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.115C>T
  hgvsp: ENSP00000453394.1:p.Arg39Cys
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.198C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg39Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

14-68066817-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066817
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066817
    reference: chr 14
allele count: 1
allele frequency: 2.555322737261716e-5
allele num: 39134
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.70G>C
  hgvsp: ENSP00000453759.1:p.Arg24Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.104G>C
  hgvsp: ENSP00000216452.4:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.104G>C
  hgvsp: ENSP00000452974.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.104G>C
  hgvsp: ENSP00000453733.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.33G>C
  hgvsp: ENSP00000453158.1:p.Arg12Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.104G>C
  hgvsp: ENSP00000453394.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.104G>C
  hgvsp: ENSP00000452924.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.104G>C
  hgvsp: ENSP00000454061.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.104G>C
  hgvsp: ENSP00000452996.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.187G>C
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg35Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-68066822-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066822
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066822
    reference: chr 14
allele count: 1
allele frequency: 2.541683611224075e-5
allele num: 39344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.99C>G
  hgvsp: ENSP00000453394.1:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.99C>G
  hgvsp: ENSP00000454061.1:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.99C>G
  hgvsp: ENSP00000452996.1:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.182C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.99C>G
  hgvsp: ENSP00000216452.4:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.99C>G
  hgvsp: ENSP00000452974.1:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.28C>G
  hgvsp: ENSP00000453158.1:p.Cys10Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.99C>G
  hgvsp: ENSP00000453733.1:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.99C>G
  hgvsp: ENSP00000452924.1:p.Cys33Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.65C>G
  hgvsp: ENSP00000453759.1:p.Cys22Trp
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys33Trp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-68066842-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066842
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066842
    reference: chr 14
allele count: 2
allele frequency: 5.049229992426155e-5
allele num: 39610
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.79C>T
  hgvsp: ENSP00000454061.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.79C>T
  hgvsp: ENSP00000216452.4:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.79C>T
  hgvsp: ENSP00000452924.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.45C>T
  hgvsp: ENSP00000453759.1:p.Arg16Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.79C>T
  hgvsp: ENSP00000452996.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.79C>T
  hgvsp: ENSP00000452974.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.79C>T
  hgvsp: ENSP00000453733.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.8C>T
  hgvsp: ENSP00000453158.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.162C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.79C>T
  hgvsp: ENSP00000453394.1:p.Arg27Trp
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33327
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg27Trp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

14-68066846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066846
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066846
    reference: chr 14
allele count: 4
allele frequency: 9.980537950995559e-5
allele num: 40078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.75C>T
  hgvsp: ENST00000559581.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.75C>T
  hgvsp: ENST00000558001.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.75C>T
  hgvsp: ENST00000558198.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.75C>T
  hgvsp: ENST00000561303.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.75C>T
  hgvsp: ENST00000216452.4:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.158C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.75C>T
  hgvsp: ENST00000559415.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.4C>T
  hgvsp: ENST00000558493.1:c.4C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.75C>T
  hgvsp: ENST00000560722.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.41C>T
  hgvsp: ENST00000561272.1:c.41C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7758
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser25Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

14-68066849-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066849
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066849
    reference: chr 14
allele count: 808
allele frequency: 2.016873845539414e-2
allele num: 40062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.72G>A
  hgvsp: ENST00000558198.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.72G>A
  hgvsp: ENST00000560722.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.38G>A
  hgvsp: ENST00000561272.1:c.38G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.72G>A
  hgvsp: ENST00000559581.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.72G>A
  hgvsp: ENST00000561303.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453158
  ensembl transcript: ENST00000558493
  gene symbol: PIGH
  hgvsc: ENST00000558493.1:c.1G>A
  hgvsp: ENST00000558493.1:c.1G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.72G>A
  hgvsp: ENST00000216452.4:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.72G>A
  hgvsp: ENST00000558001.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.155G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.72G>A
  hgvsp: ENST00000559415.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 2.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.75e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 2.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8670
  bin: 1.25e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 31613
  bin: 7.5e0
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 6.75e1
  variant carriers: 22
hgvs: p.Pro24Pro
num of homozygotes: 24
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

14-68066852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066852
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066852
    reference: chr 14
allele count: 1
allele frequency: 2.544140843637104e-5
allele num: 39306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.69C>T
  hgvsp: ENST00000558198.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.69C>T
  hgvsp: ENST00000559581.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.69C>T
  hgvsp: ENST00000558001.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.35C>T
  hgvsp: ENST00000561272.1:c.35C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.152C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.69C>T
  hgvsp: ENST00000560722.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.69C>T
  hgvsp: ENST00000559415.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.69C>T
  hgvsp: ENST00000561303.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.69C>T
  hgvsp: ENST00000216452.4:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser23Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

14-68066855-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066855
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066855
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 38626
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.66C>G
  hgvsp: ENSP00000452974.1:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.66C>G
  hgvsp: ENSP00000454061.1:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.66C>G
  hgvsp: ENSP00000452924.1:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.32C>G
  hgvsp: ENSP00000453759.1:p.Tyr11Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.66C>G
  hgvsp: ENSP00000452996.1:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.66C>G
  hgvsp: ENSP00000453733.1:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.66C>G
  hgvsp: ENSP00000216452.4:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.149C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.66C>G
  hgvsp: ENSP00000453394.1:p.Tyr22Ter
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 31358
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr22Ter
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

14-68066868-T-TGCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066868
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066871
    reference: chr 14
allele count: 2
allele frequency: 5.52822157112057e-5
allele num: 36178
alternate allele: TGCA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.50_52dupTGC
  hgvsp: ENSP00000452996.1:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.50_52dupTGC
  hgvsp: ENSP00000454061.1:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.50_52dupTGC
  hgvsp: ENSP00000452924.1:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.50_52dupTGC
  hgvsp: ENSP00000453733.1:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.50_52dupTGC
  hgvsp: ENSP00000216452.4:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.133_135dupTGC
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.16_18dupTGC
  hgvsp: ENSP00000453759.1:p.Leu6dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.50_52dupTGC
  hgvsp: ENSP00000452974.1:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.50_52dupTGC
  hgvsp: ENSP00000453394.1:p.Leu17dup
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30694
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8168
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu17dup
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

14-68066869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066869
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066869
    reference: chr 14
allele count: 2
allele frequency: 5.672149744753262e-5
allele num: 35260
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.52C>T
  hgvsp: ENSP00000216452.4:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.52C>T
  hgvsp: ENSP00000454061.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.52C>T
  hgvsp: ENSP00000452924.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.52C>T
  hgvsp: ENSP00000452996.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453759
  ensembl transcript: ENST00000561272
  gene symbol: PIGH
  hgvsc: ENST00000561272.1:c.18C>T
  hgvsp: ENSP00000453759.1:p.Gln7Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.135C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.52C>T
  hgvsp: ENSP00000452974.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.52C>T
  hgvsp: ENSP00000453733.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.52C>T
  hgvsp: ENSP00000453394.1:p.Gln18Ter
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8126
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln18Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

14-68066887-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066887
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066887
    reference: chr 14
allele count: 1
allele frequency: 2.906131938390003e-5
allele num: 34410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.34G>C
  hgvsp: ENSP00000453733.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.34G>C
  hgvsp: ENSP00000452996.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.34G>C
  hgvsp: ENSP00000216452.4:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.34G>C
  hgvsp: ENSP00000454061.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.117G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.34G>C
  hgvsp: ENSP00000453394.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.34G>C
  hgvsp: ENSP00000452924.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.34G>C
  hgvsp: ENSP00000452974.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6394
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly12Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-68066898-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066898
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066898
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 32632
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.23C>T
  hgvsp: ENSP00000216452.4:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.23C>T
  hgvsp: ENSP00000453733.1:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.23C>T
  hgvsp: ENSP00000452996.1:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.23C>T
  hgvsp: ENSP00000452974.1:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.23C>T
  hgvsp: ENSP00000454061.1:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.23C>T
  hgvsp: ENSP00000452924.1:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.106C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.23C>T
  hgvsp: ENSP00000453394.1:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29995
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser8Leu
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

14-68066906-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066906
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066906
    reference: chr 14
allele count: 1521
allele frequency: 4.719791472723887e-2
allele num: 32226
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.15G>A
  hgvsp: ENST00000216452.4:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.15G>A
  hgvsp: ENST00000558198.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.15G>A
  hgvsp: ENST00000559581.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.15G>A
  hgvsp: ENST00000559415.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.15G>A
  hgvsp: ENST00000560722.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.15G>A
  hgvsp: ENST00000561303.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.15G>A
  hgvsp: ENST00000558001.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.98G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 2.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13412
  bin: 2.5e0
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 9271
  bin: 1.25e1
  variant carriers: 793
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 1.75e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29085
  bin: 7.5e0
  variant carriers: 773
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 2.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 3.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 33
hgvs: p.Arg5Arg
num of homozygotes: 44
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

14-68066908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066908
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066908
    reference: chr 14
allele count: 1
allele frequency: 3.287959492339054e-5
allele num: 30414
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.13C>T
  hgvsp: ENSP00000452974.1:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.13C>T
  hgvsp: ENSP00000454061.1:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.13C>T
  hgvsp: ENSP00000452996.1:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.13C>T
  hgvsp: ENSP00000453733.1:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.13C>T
  hgvsp: ENSP00000452924.1:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.13C>T
  hgvsp: ENSP00000453394.1:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.96C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.13C>T
  hgvsp: ENSP00000216452.4:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9113
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31156
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg5Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

14-68066920-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066920
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066920
    reference: chr 14
allele count: 3
allele frequency: 1.105298062044065e-4
allele num: 27142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.1A>T
  hgvsp: ENSP00000453733.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.1A>T
  hgvsp: ENSP00000452996.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.1A>T
  hgvsp: ENSP00000452924.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.1A>T
  hgvsp: ENSP00000454061.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.1A>T
  hgvsp: ENSP00000453394.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.84A>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.1A>T
  hgvsp: ENSP00000216452.4:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.1A>T
  hgvsp: ENSP00000452974.1:p.Met1?
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-68066921-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066921
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066921
    reference: chr 14
allele count: 2
allele frequency: 7.462686567164179e-5
allele num: 26800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.83C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-1C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17651
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27073
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9417
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28558
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

14-68066922-ACGCCCCCACTCGGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066922
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066908
    reference: chr 14
allele count: 1
allele frequency: 3.768749528906309e-5
allele num: 26534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 17945
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9459
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: ACGCCCCCACTCGGC
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-68066925-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066925
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066925
    reference: chr 14
allele count: 1
allele frequency: 3.976459360585335e-5
allele num: 25148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-5G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.79G>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18929
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19532
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

14-68066928-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066928
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066928
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 23942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.76G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 19734
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25503
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

14-68066929-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066929
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066929
    reference: chr 14
allele count: 5
allele frequency: 2.145186202162348e-4
allele num: 23308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.75G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-9G>C
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25321
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20037
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2996
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20769
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/14-68066929-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066929
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066929
    reference: chr 14
allele count: 3
allele frequency: 1.287111721297408e-4
allele num: 23308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.75G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25321
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20037
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2996
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

14-68066929-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066929
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066929
    reference: chr 14
allele count: 1
allele frequency: 4.290372404324695e-5
allele num: 23308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.75G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20037
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25321
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20769
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23935
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

14-68066934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066934
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066934
    reference: chr 14
allele count: 2
allele frequency: 9.11410864017499e-5
allele num: 21944
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.70C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8641
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23107
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

14-68066939-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066939
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066939
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 20024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.65G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24359
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22999
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

14-68066947-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066947
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066947
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 16138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.57C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22998
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22905
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

14-68066949-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066949
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066949
    reference: chr 14
allele count: 6041
allele frequency: 3.315223356382395e-1
allele num: 18222
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.55C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-29C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22841
  bin: 7.5e0
  variant carriers: 9162
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7904
  bin: 1.25e1
  variant carriers: 4080
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 1.75e1
  variant carriers: 921
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20915
  bin: 2.5e0
  variant carriers: 1900
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.25e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 9.25e1
  variant carriers: 663
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 6.75e1
  variant carriers: 562
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.25e1
  variant carriers: 418
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 3.25e1
  variant carriers: 638
genotype quality: GenotypeQuality
  all individuals: 18409
  bin: 7.5e0
  variant carriers: 716
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 8.25e1
  variant carriers: 586
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 5.75e1
  variant carriers: 629
num of homozygotes: 817
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

14-68066952-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066952
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066952
    reference: chr 14
allele count: 1
allele frequency: 9.441087613293051e-5
allele num: 10592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.52C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4754
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

14-68066952-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066952
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066952
    reference: chr 14
allele count: 3
allele frequency: 2.832326283987916e-4
allele num: 10592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-32C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.52C>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18498
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 29048
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3265
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30370
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-68066955-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066955
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066955
    reference: chr 14
allele count: 1
allele frequency: 9.458948164964057e-5
allele num: 10572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.49G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4852
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30900
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

14-68066958-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066958
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066958
    reference: chr 14
allele count: 2
allele frequency: 2.050861361771944e-4
allele num: 9752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.46G>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29394
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10137
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-68066959-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066959
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066959
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 9302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.45T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-39T>C
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18507
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-68066959-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066959
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066959
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 9302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.45T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-39T>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29322
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30733
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

14-68066961-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066961
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066961
    reference: chr 14
allele count: 320
allele frequency: 3.825005976571838e-2
allele num: 8366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.43A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28925
  bin: 2.5e0
  variant carriers: 276
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18592
  bin: 7.5e0
  variant carriers: 570
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 1.25e1
  variant carriers: 252
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7714
  bin: 2.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 2.5e0
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 6.75e1
  variant carriers: 32
num of homozygotes: 13
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

14-68066962-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066962
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066962
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 7042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-42C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18628
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29571
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6168
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-68066963-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066963
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066963
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 7022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.41G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452974
  ensembl transcript: ENST00000561303
  gene symbol: PIGH
  hgvsc: ENST00000561303.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-43G>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18622
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6583
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4294
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6146
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

14-68066968-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066968
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066968
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 4560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-48C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-48C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-48C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.36C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-48C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-48C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-48C>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28803
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25214
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8098
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-68066971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066971
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066971
    reference: chr 14
allele count: 4
allele frequency: 8.646779074794639e-4
allele num: 4626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.33C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-51C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28222
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5407
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5629
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 3
num of homozygotes: 1
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

14-68066971-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066971
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066971
    reference: chr 14
allele count: 817
allele frequency: 1.766104626026805e-1
allele num: 4626
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-51C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.33C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-51C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-51C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-51C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-51C>G
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-51C>G
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.25e1
  variant carriers: 625
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 7.5e0
  variant carriers: 3228
genotype depth: GenotypeDepth
  all individuals: 28222
  bin: 2.5e0
  variant carriers: 2736
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 6.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 2.75e1
  variant carriers: 316
genotype quality: GenotypeQuality
  all individuals: 12715
  bin: 2.5e0
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 2.25e1
  variant carriers: 517
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 18850
  bin: 7.5e0
  variant carriers: 1414
genotype quality: GenotypeQuality
  all individuals: 5629
  bin: 1.25e1
  variant carriers: 971
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.25e1
  variant carriers: 186
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 99
num of homozygotes: 78
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

14-68066971-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066971
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066971
    reference: chr 14
allele count: 1
allele frequency: 2.16169476869866e-4
allele num: 4626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-51C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-51C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.33C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-51C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-51C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-51C>A
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-51C>A
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12715
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18850
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5407
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

14-68066972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68066972
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68066972
    reference: chr 14
allele count: 1
allele frequency: 2.198768689533861e-4
allele num: 4548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452924
  ensembl transcript: ENST00000558198
  gene symbol: PIGH
  hgvsc: ENST00000558198.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000452996
  ensembl transcript: ENST00000559415
  gene symbol: PIGH
  hgvsc: ENST00000559415.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453394
  ensembl transcript: ENST00000560722
  gene symbol: PIGH
  hgvsc: ENST00000560722.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000216452
  ensembl transcript: ENST00000216452
  gene symbol: PIGH
  hgvsc: ENST00000216452.4:c.-52C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000453733
  ensembl transcript: ENST00000559581
  gene symbol: PIGH
  hgvsc: ENST00000559581.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100564
  ensembl transcript: ENST00000559097
  gene symbol: PIGH
  hgvsc: ENST00000559097.1:n.32C>T
  variant of: http://identifiers.org/hgnc/8964
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000100564
  ensembl protein: ENSP00000454061
  ensembl transcript: ENST00000558001
  gene symbol: PIGH
  hgvsc: ENST00000558001.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/8964
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18662
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8072
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7003
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-68086648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086648
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086648
    reference: chr 14
allele count: 1
allele frequency: 4.77190303493033e-5
allele num: 20956
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-47C>T
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29431
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19838
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7565
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13453
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16627
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 9199
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10852
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 590
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2946
  num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-68086656-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086656
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086656
    reference: chr 14
allele count: 3
allele frequency: 1.353057910878586e-4
allele num: 22172
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-39G>C
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.4G>C
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31734
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7397
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4176
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

14-68086657-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086657
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086657
    reference: chr 14
allele count: 30
allele frequency: 1.346015793251974e-3
allele num: 22288
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-38C>G
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.5C>G
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16453
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32196
  bin: 7.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12780
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 25527
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4910
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3422
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3881
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.75e1
  variant carriers: 35
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 3.280839895013123e-4
  allele num: 3048
  num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

14-68086661-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086661
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086661
    reference: chr 14
allele count: 1
allele frequency: 4.181650915781551e-5
allele num: 23914
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-34G>A
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.9G>A
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7492
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 12388
  num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

14-68086661-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086661
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086661
    reference: chr 14
allele count: 1
allele frequency: 4.181650915781551e-5
allele num: 23914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.9G>T
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-34G>T
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 8.072328059412334e-5
  allele num: 12388
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

14-68086667-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086667
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086667
    reference: chr 14
allele count: 1
allele frequency: 3.790175864160097e-5
allele num: 26384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.15G>C
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-28G>C
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33876
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3346
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

14-68086669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086669
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086669
    reference: chr 14
allele count: 1
allele frequency: 3.605422555523507e-5
allele num: 27736
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-26C>T
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.17C>T
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4122
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34647
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4034
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3418
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

14-68086678-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086678
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086678
    reference: chr 14
allele count: 1
allele frequency: 2.905456447207856e-5
allele num: 34418
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-17T>A
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.26T>A
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6943
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 254
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

14-68086683-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086683
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086683
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 39446
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-12G>T
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.31G>T
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37108
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6492
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-68086684-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68086684
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 68086684
    reference: chr 14
allele count: 1
allele frequency: 2.460387757110521e-5
allele num: 40644
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081181
  ensembl protein: ENSP00000261783
  ensembl transcript: ENST00000261783
  gene symbol: ARG2
  hgvsc: ENST00000261783.3:c.-11T>G
  variant of: http://identifiers.org/hgnc/664
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081181
  ensembl transcript: ENST00000557120
  gene symbol: ARG2
  hgvsc: ENST00000557120.1:n.32T>G
  variant of: http://identifiers.org/hgnc/664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3058
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 1589
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4840
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27386
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.362502362502362e-5
allele num: 42328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12062
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQ
type: SiteQuality
SIO_000300: 5.797e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

VQSLOD
type: SiteQuality
SIO_000300: -2.089e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

DP
type: SiteQuality
SIO_000300: 8.72268e5

GenotypeQuality
all individuals: 1515
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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SIO_000300: 8.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 11948
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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num of homozygotes: 0

African
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num of homozygotes: 0

Latino
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.38e-2

QD
type: SiteQuality
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
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num of homozygotes: 0

South Asian
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allele frequency: 2.558947176019009e-3
allele num: 10942
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 9.191176470588236e-3
allele num: 544
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European (Non-Finnish)
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allele frequency: 2.532357906584131e-4
allele num: 35540
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East Asian
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allele frequency: 1.365366317792578e-1
allele num: 4204
num of homozygotes: 31

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.855e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.15e-2

MQRankSum
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DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

African
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East Asian
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Other
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Latino
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European (Finnish)
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South Asian
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DP
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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African
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East Asian
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FS
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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QD
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DP
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.652346331791143e-4
allele num: 6052
num of homozygotes: 0

FS
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.627604166666667e-4
allele num: 6144
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 462
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 1.619170984455959e-4
allele num: 6176
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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BaseQRankSum
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SIO_000300: -7.27e-1

ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7188
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 6.009615384615385e-4
allele num: 6656
num of homozygotes: 0

African
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allele count: 1
allele frequency: 5.656108597285068e-4
allele num: 1768
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.653061224489796e-3
allele num: 784
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.984126984126984e-3
allele num: 504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.32475e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

MQRankSum
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.21e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7484
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
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DP
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -4.02e-2

ReadPosRankSum
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SIO_000300: 7.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 516
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 1838
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 5.264543300868649e-4
allele num: 7598
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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QD
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

European (Finnish)
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allele count: 4
allele frequency: 2.298850574712644e-2
allele num: 174
num of homozygotes: 0

Other
type: Population
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allele frequency: 5.263157894736842e-3
allele num: 190
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African
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allele frequency: 1.061571125265393e-3
allele num: 1884
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 9.873060648801129e-4
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Latino
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allele frequency: 2.280701754385965e-2
allele num: 570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 201
allele frequency: 2.460822722820764e-2
allele num: 8168
num of homozygotes: 4

DP
type: SiteQuality
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MQ
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
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Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 7564
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3408
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2272
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 7.614213197969543e-3
allele num: 1182
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 8.286e0

QD
type: SiteQuality
SIO_000300: 1.709e1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

DP
type: SiteQuality
SIO_000300: 5.18431e5

GenotypeQuality
all individuals: 936
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 52
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 6661
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 7.462686567164179e-3
allele num: 1206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10784
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e-1

DP
type: SiteQuality
SIO_000300: 5.20034e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.399999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.428e0

QD
type: SiteQuality
SIO_000300: 1.69e1

GenotypeQuality
all individuals: 26417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6796
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 138
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GenotypeQuality
all individuals: 777
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.75e1
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GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 187
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variant carriers: 1

GenotypeQuality
all individuals: 888
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GenotypeQuality
all individuals: 77
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 2.707092582566324e-4
allele num: 11082
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.39858e2

DP
type: SiteQuality
SIO_000300: 5.70688e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.81e0

VQSLOD
type: SiteQuality
SIO_000300: -2.706e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.542e0

MQ
type: SiteQuality
SIO_000300: 5.72e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.707e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.33e-2

QD
type: SiteQuality
SIO_000300: 3.7e-1

GenotypeQuality
all individuals: 1876
bin: 1.75e1
variant carriers: 19

GenotypeQuality
all individuals: 7898
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 33728
bin: 2.25e1
variant carriers: 19

GenotypeQuality
all individuals: 146
bin: 7.75e1
variant carriers: 13

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1534
bin: 2.75e1
variant carriers: 17

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 21

GenotypeQuality
all individuals: 610
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1239
bin: 1.25e1
variant carriers: 16

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 28

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 176
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 40
bin: 9.25e1
variant carriers: 28

GenotypeQuality
all individuals: 63
bin: 8.25e1
variant carriers: 20

GenotypeQuality
all individuals: 1337
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 49
bin: 8.75e1
variant carriers: 35

GenotypeQuality
all individuals: 967
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 631
bin: 9.75e1
variant carriers: 608

GenotypeQuality
all individuals: 8474
bin: 6.25e1
variant carriers: 17

European (Non-Finnish)
type: Population
allele count: 76
allele frequency: 4.586048756939416e-3
allele num: 16572
num of homozygotes: 0

African
type: Population
allele count: 522
allele frequency: 1.415401301518438e-1
allele num: 3688
num of homozygotes: 20

South Asian
type: Population
allele count: 3
allele frequency: 3.400589435502154e-4
allele num: 8822
num of homozygotes: 0

Latino
type: Population
allele count: 39
allele frequency: 1.961770623742455e-2
allele num: 1988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 6.84931506849315e-3
allele num: 292
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

DP
type: SiteQuality
SIO_000300: 6.19957e5

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 34023
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
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variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 130
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variant carriers: 0

GenotypeQuality
all individuals: 293
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GenotypeQuality
all individuals: 6716
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GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 923
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
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variant carriers: 0

GenotypeQuality
all individuals: 2595
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8465
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18800
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.089324618736383e-4
allele num: 9180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2366
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.897e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

DP
type: SiteQuality
SIO_000300: 6.36033e5

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2008
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variant carriers: 0

GenotypeQuality
all individuals: 160
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GenotypeQuality
all individuals: 1345
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GenotypeQuality
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GenotypeQuality
all individuals: 911
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2586
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.620545073375262e-4
allele num: 3816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 6.46568e5

QD
type: SiteQuality
SIO_000300: 1.426e1

GenotypeQuality
all individuals: 1297
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 2579
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 1515
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 8673
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6354
bin: 7.5e0
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GenotypeQuality
all individuals: 393
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variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
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variant carriers: 0

GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.06951871657754e-4
allele num: 9350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.586e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.06e-1

FS
type: SiteQuality
SIO_000300: 4.752e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.438e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.449e0

DP
type: SiteQuality
SIO_000300: 6.45669e5

GenotypeQuality
all individuals: 491
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variant carriers: 0

GenotypeQuality
all individuals: 7627
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 1714
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GenotypeQuality
all individuals: 8231
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GenotypeQuality
all individuals: 1470
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 857
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 1241
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GenotypeQuality
all individuals: 414
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variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.25e1
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GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 1.057529610829103e-4
allele num: 9456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3724
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.897116134060795e-4
allele num: 2566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.017e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

FS
type: SiteQuality
SIO_000300: 1.474e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

DP
type: SiteQuality
SIO_000300: 6.35202e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34062
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 199
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20222
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.207868714496107e-4
allele num: 9506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.021e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.59e-1

DP
type: SiteQuality
SIO_000300: 6.34568e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.86e-2

QD
type: SiteQuality
SIO_000300: 1.132e1

GenotypeQuality
all individuals: 115
bin: 7.75e1
variant carriers: 21

GenotypeQuality
all individuals: 722
bin: 9.75e1
variant carriers: 707

GenotypeQuality
all individuals: 40
bin: 9.25e1
variant carriers: 32

GenotypeQuality
all individuals: 207
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 1197
bin: 1.25e1
variant carriers: 7

GenotypeQuality
all individuals: 7963
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 8476
bin: 6.25e1
variant carriers: 20

GenotypeQuality
all individuals: 154
bin: 5.75e1
variant carriers: 26

GenotypeQuality
all individuals: 278
bin: 5.25e1
variant carriers: 16

GenotypeQuality
all individuals: 624
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 165
bin: 7.25e1
variant carriers: 21

GenotypeQuality
all individuals: 33167
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 253
bin: 4.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1866
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1591
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 72
bin: 8.25e1
variant carriers: 39

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 34

GenotypeQuality
all individuals: 586
bin: 3.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1348
bin: 3.25e1
variant carriers: 17

Latino
type: Population
allele count: 54
allele frequency: 1.856946354883081e-2
allele num: 2908
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.268703898840885e-4
allele num: 9490
num of homozygotes: 0

African
type: Population
allele count: 656
allele frequency: 1.631029338637494e-1
allele num: 4022
num of homozygotes: 24

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2544
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 7.142857142857143e-3
allele num: 280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 91
allele frequency: 4.546817227940442e-3
allele num: 20014
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.89e0

DP
type: SiteQuality
SIO_000300: 6.33283e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.37e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 1.103e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 362
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33774
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8630
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 829
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8494
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.054629824931449e-4
allele num: 9482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.53e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.19546e5

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.57e-1

FS
type: SiteQuality
SIO_000300: 4.752e0

GenotypeQuality
all individuals: 33016
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
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variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9064
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 8171
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19416
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.06e-2

DP
type: SiteQuality
SIO_000300: 6.11196e5

VQSLOD
type: SiteQuality
SIO_000300: -5.31e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2021
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10225
bin: 7.5e0
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GenotypeQuality
all individuals: 31002
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 7419
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variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 765
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variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 8.680555555555555e-4
allele num: 2304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2708
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

FS
type: SiteQuality
SIO_000300: 1.414e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.29e-2

DP
type: SiteQuality
SIO_000300: 5.81279e5

GenotypeQuality
all individuals: 10170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 29424
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
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variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.705157462345961e-5
allele num: 17528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2242
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.787878787878788e-4
allele num: 2640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

DP
type: SiteQuality
SIO_000300: 5.72265e5

FS
type: SiteQuality
SIO_000300: 1.243e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

QD
type: SiteQuality
SIO_000300: 1.028e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31720
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2589
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 17
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variant carriers: 1

GenotypeQuality
all individuals: 686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2746
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.852059925093633e-5
allele num: 17088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.5e0

VQSLOD
type: SiteQuality
SIO_000300: -2.047e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.65238e5

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.51e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31693
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5771
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1426
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12746
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2386
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 5.45e0

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQ
type: SiteQuality
SIO_000300: 5.703e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.77e-2

FS
type: SiteQuality
SIO_000300: 7.501e0

VQSLOD
type: SiteQuality
SIO_000300: -1.722e0

DP
type: SiteQuality
SIO_000300: 5.43154e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
all individuals: 13434
bin: 7.5e0
variant carriers: 24

GenotypeQuality
all individuals: 30197
bin: 2.25e1
variant carriers: 57

GenotypeQuality
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bin: 1.25e1
variant carriers: 37

GenotypeQuality
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bin: 3.25e1
variant carriers: 31

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 49

GenotypeQuality
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bin: 9.25e1
variant carriers: 87

GenotypeQuality
all individuals: 1435
bin: 9.75e1
variant carriers: 1429

GenotypeQuality
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bin: 6.25e1
variant carriers: 54

GenotypeQuality
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bin: 8.25e1
variant carriers: 89

GenotypeQuality
all individuals: 1560
bin: 2.75e1
variant carriers: 49

GenotypeQuality
all individuals: 548
bin: 6.75e1
variant carriers: 70

GenotypeQuality
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bin: 7.75e1
variant carriers: 68

GenotypeQuality
all individuals: 1946
bin: 1.75e1
variant carriers: 44

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 92

Other
type: Population
allele count: 10
allele frequency: 4.23728813559322e-2
allele num: 236
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.407407407407408e-3
allele num: 540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 647
allele frequency: 4.110024139245331e-2
allele num: 15742
num of homozygotes: 9

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1790
num of homozygotes: 0

Latino
type: Population
allele count: 170
allele frequency: 6.921824104234528e-2
allele num: 2456
num of homozygotes: 2

African
type: Population
allele count: 578
allele frequency: 2.035211267605634e-1
allele num: 2840
num of homozygotes: 30

South Asian
type: Population
allele count: 112
allele frequency: 1.299002551612155e-2
allele num: 8622
num of homozygotes: 2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 5.27004e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 4704
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variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.709608158883521e-5
allele num: 14904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2232
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.592e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-2

DP
type: SiteQuality
SIO_000300: 5.09573e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e-1

FS
type: SiteQuality
SIO_000300: 3.497e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.319e0

QD
type: SiteQuality
SIO_000300: 2.27e0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 1988
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.833375926399182e-4
allele num: 7826
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.139e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.58e-1

DP
type: SiteQuality
SIO_000300: 4.55338e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.318000000000001e-1

FS
type: SiteQuality
SIO_000300: 9.307e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 1329
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 637
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2104
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variant carriers: 1

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
all individuals: 1805
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 1

GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 302
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.377410468319559e-3
allele num: 1452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13014
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.49854e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 2.277e0

QD
type: SiteQuality
SIO_000300: 1.076e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 1336
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 74
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.755545214828603e-5
allele num: 12894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2016
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.69e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.71e-2

DP
type: SiteQuality
SIO_000300: 4.44238e5

MQRankSum
type: SiteQuality
SIO_000300: -2.793e0

QD
type: SiteQuality
SIO_000300: 2.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.007e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1839
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GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
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South Asian
type: Population
allele count: 1
allele frequency: 1.34698275862069e-4
allele num: 7424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.308e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.94e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.298e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

DP
type: SiteQuality
SIO_000300: 4.26384e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.099e1

DP
type: SiteQuality
SIO_000300: 4.10977e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
all individuals: 552
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variant carriers: 0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 129
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GenotypeQuality
all individuals: 135
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 5.630630630630631e-4
allele num: 1776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.78826895565093e-4
allele num: 11184
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.312335958005249e-3
allele num: 1524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7090
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.05305e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.088e1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.180000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 3
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 6.561679790026247e-4
allele num: 1524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.410437235543018e-4
allele num: 7090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.941344778254649e-5
allele num: 11184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.180000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

QD
type: SiteQuality
SIO_000300: 1.088e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.05305e5

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 135
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.941344778254649e-5
allele num: 11184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7090
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.180000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.09e0

QD
type: SiteQuality
SIO_000300: 1.088e1

DP
type: SiteQuality
SIO_000300: 4.05305e5

GenotypeQuality
all individuals: 992
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.521995810321844e-5
allele num: 10502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1134
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 7.2992700729927e-4
allele num: 1370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1676
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.41e-2

DP
type: SiteQuality
SIO_000300: 3.89929e5

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

GenotypeQuality
all individuals: 545
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 538
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.299e0

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-2

QD
type: SiteQuality
SIO_000300: 6.05e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.70339e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 168
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variant carriers: 1

GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 0
bin: 9.25e1
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GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7794
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.842e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 3.136e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 3.42891e5

GenotypeQuality
all individuals: 10636
bin: 2.25e1
variant carriers: 1227

GenotypeQuality
all individuals: 2100
bin: 1.75e1
variant carriers: 1289

GenotypeQuality
all individuals: 330
bin: 4.75e1
variant carriers: 319

GenotypeQuality
all individuals: 6338
bin: 2.5e0
variant carriers: 39

GenotypeQuality
all individuals: 372
bin: 7.25e1
variant carriers: 368

GenotypeQuality
all individuals: 360
bin: 3.75e1
variant carriers: 261

GenotypeQuality
all individuals: 1487
bin: 2.75e1
variant carriers: 899

GenotypeQuality
all individuals: 761
bin: 8.75e1
variant carriers: 761

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 168

GenotypeQuality
all individuals: 430
bin: 7.75e1
variant carriers: 429

GenotypeQuality
all individuals: 2488
bin: 1.25e1
variant carriers: 828

GenotypeQuality
all individuals: 4842
bin: 9.75e1
variant carriers: 4841

GenotypeQuality
all individuals: 870
bin: 6.25e1
variant carriers: 751

African
type: Population
allele count: 91
allele frequency: 9.304703476482618e-2
allele num: 978
num of homozygotes: 2

East Asian
type: Population
allele count: 243
allele frequency: 2.736486486486486e-1
allele num: 888
num of homozygotes: 26

Latino
type: Population
allele count: 629
allele frequency: 4.011479591836735e-1
allele num: 1568
num of homozygotes: 80

South Asian
type: Population
allele count: 1352
allele frequency: 2.590038314176245e-1
allele num: 5220
num of homozygotes: 166

European (Finnish)
type: Population
allele count: 122
allele frequency: 4.206896551724138e-1
allele num: 290
num of homozygotes: 24

European (Non-Finnish)
type: Population
allele count: 3563
allele frequency: 3.901664476565922e-1
allele num: 9132
num of homozygotes: 513

Other
type: Population
allele count: 41
allele frequency: 2.808219178082192e-1
allele num: 146
num of homozygotes: 6

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 3.49016e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.13e-2

FS
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.73e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
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variant carriers: 0

GenotypeQuality
all individuals: 793
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 30370
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 10549
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.322751322751323e-3
allele num: 756
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

QD
type: SiteQuality
SIO_000300: 1.531e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.45e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 6.101e0

VQSLOD
type: SiteQuality
SIO_000300: -1.635e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.77879e5

GenotypeQuality
all individuals: 16
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 553
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 175
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variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 8.731082654249127e-4
allele num: 3436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.101e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.45e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.531e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.635e-1

DP
type: SiteQuality
SIO_000300: 2.77879e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 11266
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GenotypeQuality
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GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 4
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variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.055921052631579e-4
allele num: 4864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 3.056e0

DP
type: SiteQuality
SIO_000300: 2.75887e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

QD
type: SiteQuality
SIO_000300: 2.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.238e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 30991
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GenotypeQuality
all individuals: 5100
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variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
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GenotypeQuality
all individuals: 2552
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GenotypeQuality
all individuals: 2668
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 729
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GenotypeQuality
all individuals: 0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.857142857142857e-3
allele num: 700
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -6.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
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DP
type: SiteQuality
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QD
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SIO_000300: 8.220000000000001e0

MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4232
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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DP
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 3076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4232
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 2.65098e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.58e-2

MQRankSum
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BaseQRankSum
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SIO_000300: -3.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.69e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 31

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 74

GenotypeQuality
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GenotypeQuality
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variant carriers: 114

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 48

GenotypeQuality
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variant carriers: 51

European (Non-Finnish)
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allele count: 10
allele frequency: 2.638522427440633e-3
allele num: 3790
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

South Asian
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allele count: 244
allele frequency: 8.701854493580599e-2
allele num: 2804
num of homozygotes: 13

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

East Asian
type: Population
allele count: 60
allele frequency: 1.435406698564593e-1
allele num: 418
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.631578947368421e-2
allele num: 76
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 7.142857142857143e-3
allele num: 560
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.32e-2

QD
type: SiteQuality
SIO_000300: 1.333e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 2.57222e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2316
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.913e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.754e0

QD
type: SiteQuality
SIO_000300: 8.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 2.49506e5

FS
type: SiteQuality
SIO_000300: 3.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 538
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2294
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3242
num of homozygotes: 0

Other
type: Population
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allele num: 64
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
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SIO_000300: 1.23e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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InbreedingCoeff
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SIO_000300: -6.270000000000001e-2

DP
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SIO_000300: 2.49287e5

MQRankSum
type: SiteQuality
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2170
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 1470
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European (Finnish)
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allele frequency: 0.0e0
allele num: 58
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 382
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Latino
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allele num: 244
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.14e-2

DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 8.04e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 2.631578947368421e-3
allele num: 380
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64
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European (Non-Finnish)
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allele count: 1
allele frequency: 4.574565416285453e-4
allele num: 2186
num of homozygotes: 0

Other
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East Asian
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Latino
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allele num: 290
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South Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

FS
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VQSLOD
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.34e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 158

European (Finnish)
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allele count: 12
allele frequency: 1.875e-1
allele num: 64
num of homozygotes: 0

European (Non-Finnish)
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allele count: 288
allele frequency: 1.31747483989021e-1
allele num: 2186
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Latino
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allele num: 290
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East Asian
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allele num: 202
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African
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allele frequency: 5.789473684210526e-2
allele num: 380
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South Asian
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allele count: 335
allele frequency: 2.288251366120219e-1
allele num: 1464
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Other
type: Population
allele count: 6
allele frequency: 1.5e-1
allele num: 40
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FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.5625e-2
allele num: 64
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East Asian
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allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 2186
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Other
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Latino
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South Asian
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ClippingRankSum
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MQRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.34e-1

DP
type: SiteQuality
SIO_000300: 2.38832e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
SIO_000300: 2.007e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6891
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24084
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.604051565377532e-4
allele num: 2172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

QD
type: SiteQuality
SIO_000300: 2.284e1

DP
type: SiteQuality
SIO_000300: 2.40992e5

VQSLOD
type: SiteQuality
SIO_000300: -1.426e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.84e-2

FS
type: SiteQuality
SIO_000300: 3.358e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1130
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.538071065989848e-4
allele num: 3940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.29397e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.83e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.903e-1

QD
type: SiteQuality
SIO_000300: 1.165e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.683e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.74246384387524e-4
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.250825082508251e-4
allele num: 1212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.32e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 4.59091e5

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 1.0093e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.205e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.432664756446991e-3
allele num: 698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 2.426763737216155e-3
allele num: 11538
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 2.457e0

DP
type: SiteQuality
SIO_000300: 4.65649e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

QD
type: SiteQuality
SIO_000300: 1.277e1

Latino
type: Population
allele count: 1
allele frequency: 7.552870090634441e-4
allele num: 1324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.91804e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

FS
type: SiteQuality
SIO_000300: 2.315e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e-1

QD
type: SiteQuality
SIO_000300: 1.109e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1324
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

FS
type: SiteQuality
SIO_000300: 2.315e0

DP
type: SiteQuality
SIO_000300: 4.91804e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.109e1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13766
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.622516556291391e-4
allele num: 1510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4836
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.3261e5

QD
type: SiteQuality
SIO_000300: 3.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.284e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.854949273375377e-5
allele num: 14588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.08e-1

DP
type: SiteQuality
SIO_000300: 5.49073e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.424758598242378e-5
allele num: 18434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5850
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.31e-1

MQ
type: SiteQuality
SIO_000300: 5.816e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: -2.451e0

DP
type: SiteQuality
SIO_000300: 6.10289e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

DP
type: SiteQuality
SIO_000300: 6.56049e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.219e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.838e0

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0