1-50661463-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661463
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661463
    reference: chr 1
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+5G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+5G>T
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3516
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.25e1
  variant carriers: 0
hgvs: c.785+5G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS

1-50661464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661464
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661464
    reference: chr 1
allele count: 1
allele frequency: 8.287338604080686e-6
allele num: 120666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+6C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+6C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9256
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4968
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
hgvs: c.785+6C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-50661468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661468
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661468
    reference: chr 1
allele count: 2
allele frequency: 1.659200265472042e-5
allele num: 120540
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+10C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4952
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

1-50661474-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661474
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661474
    reference: chr 1
allele count: 1
allele frequency: 8.318221896887321e-6
allele num: 120218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+16G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+16G>C
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7921
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8982
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-50661476-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661476
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661476
    reference: chr 1
allele count: 1
allele frequency: 8.326117364950376e-6
allele num: 120104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+18G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+18G>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8948
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3431
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ

1-50661483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661483
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661483
    reference: chr 1
allele count: 1
allele frequency: 8.370162046337218e-6
allele num: 119472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+25G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+25G>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7827
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22663
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

1-50661497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661497
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661497
    reference: chr 1
allele count: 3
allele frequency: 2.537212449255751e-5
allele num: 118240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+39G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+39G>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15469
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7794
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6971
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

1-50661510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50661510
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50661510
    reference: chr 1
allele count: 25
allele frequency: 2.144045556679988e-4
allele num: 116602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.734+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.785+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.749+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.734+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.443+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.743+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.734+52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.749+52C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11756
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9669
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4631
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-50663050-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663050
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663050
    reference: chr 1
allele count: 1
allele frequency: 8.312966565248474e-6
allele num: 120294
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.786-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.750-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.744-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.444-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.735-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.735-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.750-51G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.735-51G>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15427
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

1-50663050-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663050
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663050
    reference: chr 1
allele count: 1
allele frequency: 8.312966565248474e-6
allele num: 120294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.735-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.735-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.750-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.444-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.786-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.744-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.750-51G>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.735-51G>C
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-50663059-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663059
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663059
    reference: chr 1
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.744-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.750-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.735-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.786-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.735-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.444-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.750-42A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.735-42A>G
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15426
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5584
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

1-50663091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663091
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663091
    reference: chr 1
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.744-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.735-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.750-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.735-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.786-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.735-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.444-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.750-10C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15426
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-50663131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663131
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663131
    reference: chr 1
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.474C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.780C>T
  hgvsp: ENST00000371821.1:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.765C>T
  hgvsp: ENST00000371823.4:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.816C>T
  hgvsp: ENST00000357083.4:c.816C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.765C>T
  hgvsp: ENST00000371824.1:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.780C>T
  hgvsp: ENST00000371819.1:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.765C>T
  hgvsp: ENST00000371827.1:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.774C>T
  hgvsp: ENST00000448907.2:c.774C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly272Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-50663144-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663144
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663144
    reference: chr 1
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.773+5T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.782+5T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.788+5T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.788+5T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.773+5T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.773+5T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.487T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.824+5T>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7711
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: c.824+5T>A
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-50663173-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663173
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663173
    reference: chr 1
allele count: 5
allele frequency: 4.147174944427856e-5
allele num: 120564
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.788+34T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.782+34T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.824+34T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.773+34T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.516T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.788+34T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.773+34T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.773+34T>C
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5446
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

1-50663181-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663181
    reference: chr 1
allele count: 2
allele frequency: 1.665778251599147e-5
allele num: 120064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.773+42C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.524C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.788+42C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.773+42C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.824+42C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.782+42C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.788+42C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.773+42C>G
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-50663181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663181
    reference: chr 1
allele count: 1
allele frequency: 8.328891257995735e-6
allele num: 120064
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.524C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.788+42C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.773+42C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.773+42C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.824+42C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.782+42C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.773+42C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.788+42C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

1-50663182-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50663182
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50663182
    reference: chr 1
allele count: 3
allele frequency: 2.497336174746936e-5
allele num: 120128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.773+43A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000162374
  ensembl transcript: ENST00000474675
  gene symbol: ELAVL4
  hgvsc: ENST00000474675.1:n.525A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.788+43A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.782+43A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.773+43A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.788+43A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.773+43A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.824+43A>G
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15424
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43417
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-50666442-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666442
    reference: chr 1
allele count: 1
allele frequency: 8.997174887085456e-6
allele num: 111146
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-81A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-81A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-81A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-39A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-39A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-81A>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-81A>G
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40906
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

1-50666450-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666450
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666450
    reference: chr 1
allele count: 1
allele frequency: 8.987148377819717e-6
allele num: 111270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-31G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-31G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-73G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-73G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-73G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-73G>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-73G>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40906
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-50666451-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666451
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666451
    reference: chr 1
allele count: 3
allele frequency: 2.696289905090595e-5
allele num: 111264
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-72T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-72T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-30T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-72T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-72T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-30T>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-72T>A
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40906
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51410
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-50666458-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666458
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666458
    reference: chr 1
allele count: 1
allele frequency: 8.976499524245525e-6
allele num: 111402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-23A>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-65A>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-65A>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-65A>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-65A>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-23A>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-65A>C
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40906
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-50666467-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666467
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666467
    reference: chr 1
allele count: 53
allele frequency: 4.749699783126915e-4
allele num: 111586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-14T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-56T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-56T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-56T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-14T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-56T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-56T>C
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40912
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-50666471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666471
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666471
    reference: chr 1
allele count: 14
allele frequency: 1.253559212764814e-4
allele num: 111682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-10C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-52C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-52C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40902
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-50666475-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666475
    reference: chr 1
allele count: 1
allele frequency: 8.941984405179198e-6
allele num: 111832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.774-6G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-48G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.789-6G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-48G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-48G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-48G>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-48G>T
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51397
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 6.75e1
  variant carriers: 0
hgvs: c.774-6G>T
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

1-50666486-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666486
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666486
    reference: chr 1
allele count: 1
allele frequency: 8.898063781321184e-6
allele num: 112384
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-37T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-37T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-37T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-37T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.794T>C
  hgvsp: ENSP00000360886.1:p.Met265Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.779T>C
  hgvsp: ENSP00000360888.4:p.Met260Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-37T>C
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51399
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met260Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/1-50666499-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666499
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666499
    reference: chr 1
allele count: 1
allele frequency: 8.82674857889348e-6
allele num: 113292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.807C>A
  hgvsp: ENST00000371821.1:c.807C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-24C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.792C>A
  hgvsp: ENST00000371823.4:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-24C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-24C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-24C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-24C>A
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40903
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val264Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

1-50666501-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666501
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666501
    reference: chr 1
allele count: 2
allele frequency: 1.758736523681387e-5
allele num: 113718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.794C>G
  hgvsp: ENSP00000360888.4:p.Pro265Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-22C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-22C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.809C>G
  hgvsp: ENSP00000360886.1:p.Pro270Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-22C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-22C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-22C>G
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3444
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51400
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro265Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP

1-50666502-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666502
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666502
    reference: chr 1
allele count: 1
allele frequency: 8.784104284886069e-6
allele num: 113842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-21C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-21C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.810C>G
  hgvsp: ENST00000371821.1:c.810C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-21C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-21C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.795C>G
  hgvsp: ENST00000371823.4:c.795C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-21C>G
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40903
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51400
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro265Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-50666503-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666503
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666503
    reference: chr 1
allele count: 11
allele frequency: 9.650477259966312e-5
allele num: 113984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.811C>A
  hgvsp: ENSP00000360886.1:p.Pro271Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-20C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-20C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.796C>A
  hgvsp: ENSP00000360888.4:p.Pro266Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-20C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-20C>A
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-20C>A
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40905
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro266Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-50666503-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666503
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666503
    reference: chr 1
allele count: 8
allele frequency: 7.018528916339136e-5
allele num: 113984
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-20C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.811C>G
  hgvsp: ENSP00000360886.1:p.Pro271Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.796C>G
  hgvsp: ENSP00000360888.4:p.Pro266Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-20C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-20C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-20C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-20C>G
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40905
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro266Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-50666506-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666506
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666506
    reference: chr 1
allele count: 1
allele frequency: 8.746763697431951e-6
allele num: 114328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-17T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-17T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.799T>C
  hgvsp: ENSP00000360888.4:p.Ser267Pro
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-17T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.814T>C
  hgvsp: ENSP00000360886.1:p.Ser272Pro
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-17T>C
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-17T>C
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40902
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser267Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

1-50666510-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666510
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666510
    reference: chr 1
allele count: 1
allele frequency: 8.685984295740394e-6
allele num: 115128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-13C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.803C>G
  hgvsp: ENSP00000360888.4:p.Ala268Gly
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.818C>G
  hgvsp: ENSP00000360886.1:p.Ala273Gly
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-13C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-13C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-13C>G
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-13C>G
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2903
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40902
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala268Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-50666515-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666515
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666515
    reference: chr 1
allele count: 101255
allele frequency: 8.398304663006154e-1
allele num: 120566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-8C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.823C>T
  hgvsp: ENSP00000360886.1:p.Pro275Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-8C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.808C>T
  hgvsp: ENSP00000360888.4:p.Pro270Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-8C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-8C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-8C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 2.75e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 353
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.75e1
  variant carriers: 528
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 47610
  bin: 9.75e1
  variant carriers: 47595
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 1119
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 2.25e1
  variant carriers: 1363
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 8.25e1
  variant carriers: 715
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 1.75e1
  variant carriers: 1708
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 8.75e1
  variant carriers: 783
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 433
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 9.25e1
  variant carriers: 964
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.75e1
  variant carriers: 267
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 270
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 3.25e1
  variant carriers: 253
genotype quality: GenotypeQuality
  all individuals: 53418
  bin: 9.75e1
  variant carriers: 53371
hgvs: p.Pro270Ser
num of homozygotes: 43891
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-50666519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666519
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666519
    reference: chr 1
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.783-4C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.774-4C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.774-4C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.812C>T
  hgvsp: ENSP00000360888.4:p.Pro271Leu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.789-4C>T
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.827C>T
  hgvsp: ENSP00000360886.1:p.Pro276Leu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.825-4C>T
  variant of: http://identifiers.org/hgnc/3315
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42522
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9956
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro271Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-50666533-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666533
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666533
    reference: chr 1
allele count: 6
allele frequency: 4.961630060862662e-5
allele num: 120928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.784A>G
  hgvsp: ENSP00000360892.1:p.Ile262Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.793A>G
  hgvsp: ENSP00000399939.2:p.Ile265Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.826A>G
  hgvsp: ENSP00000360888.4:p.Ile276Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.841A>G
  hgvsp: ENSP00000360886.1:p.Ile281Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.784A>G
  hgvsp: ENSP00000360889.1:p.Ile262Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.799A>G
  hgvsp: ENSP00000360884.1:p.Ile267Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.835A>G
  hgvsp: ENSP00000349594.4:p.Ile279Val
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile279Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

1-50666540-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666540
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666540
    reference: chr 1
allele count: 3
allele frequency: 2.478110028085247e-5
allele num: 121060
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.842T>C
  hgvsp: ENSP00000349594.4:p.Ile281Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.791T>C
  hgvsp: ENSP00000360889.1:p.Ile264Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.800T>C
  hgvsp: ENSP00000399939.2:p.Ile267Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.806T>C
  hgvsp: ENSP00000360884.1:p.Ile269Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.848T>C
  hgvsp: ENSP00000360886.1:p.Ile283Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.791T>C
  hgvsp: ENSP00000360892.1:p.Ile264Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.833T>C
  hgvsp: ENSP00000360888.4:p.Ile278Thr
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile281Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-50666541-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666541
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666541
    reference: chr 1
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.849T>C
  hgvsp: ENST00000371821.1:c.849T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.843T>C
  hgvsp: ENST00000357083.4:c.843T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.834T>C
  hgvsp: ENST00000371823.4:c.834T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.807T>C
  hgvsp: ENST00000371819.1:c.807T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.801T>C
  hgvsp: ENST00000448907.2:c.801T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.792T>C
  hgvsp: ENST00000371824.1:c.792T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.792T>C
  hgvsp: ENST00000371827.1:c.792T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44949
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile281Ile
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-50666546-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666546
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666546
    reference: chr 1
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.839G>A
  hgvsp: ENSP00000360888.4:p.Gly280Glu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.806G>A
  hgvsp: ENSP00000399939.2:p.Gly269Glu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.854G>A
  hgvsp: ENSP00000360886.1:p.Gly285Glu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.812G>A
  hgvsp: ENSP00000360884.1:p.Gly271Glu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.797G>A
  hgvsp: ENSP00000360889.1:p.Gly266Glu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.797G>A
  hgvsp: ENSP00000360892.1:p.Gly266Glu
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.848G>A
  hgvsp: ENSP00000349594.4:p.Gly283Glu
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45096
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly283Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-50666557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666557
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666557
    reference: chr 1
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.817C>T
  hgvsp: ENSP00000399939.2:p.Leu273Phe
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.850C>T
  hgvsp: ENSP00000360888.4:p.Leu284Phe
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.865C>T
  hgvsp: ENSP00000360886.1:p.Leu289Phe
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.823C>T
  hgvsp: ENSP00000360884.1:p.Leu275Phe
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.859C>T
  hgvsp: ENSP00000349594.4:p.Leu287Phe
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.808C>T
  hgvsp: ENSP00000360892.1:p.Leu270Phe
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.808C>T
  hgvsp: ENSP00000360889.1:p.Leu270Phe
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu287Phe
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-50666571-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666571
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666571
    reference: chr 1
allele count: 5
allele frequency: 4.120109430106464e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.831C>T
  hgvsp: ENST00000448907.2:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.864C>T
  hgvsp: ENST00000371823.4:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.822C>T
  hgvsp: ENST00000371824.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.822C>T
  hgvsp: ENST00000371827.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.879C>T
  hgvsp: ENST00000371821.1:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.873C>T
  hgvsp: ENST00000357083.4:c.873C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.837C>T
  hgvsp: ENST00000371819.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn291Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

1-50666573-TCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666573
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666571
    reference: chr 1
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.877_878delCC
  hgvsp: ENSP00000349594.4:p.Pro293TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.835_836delCC
  hgvsp: ENSP00000399939.2:p.Pro279TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.826_827delCC
  hgvsp: ENSP00000360892.1:p.Pro276TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.868_869delCC
  hgvsp: ENSP00000360888.4:p.Pro290TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.841_842delCC
  hgvsp: ENSP00000360884.1:p.Pro281TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.826_827delCC
  hgvsp: ENSP00000360889.1:p.Pro276TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.883_884delCC
  hgvsp: ENSP00000360886.1:p.Pro295TrpfsTer20
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 16485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro293TrpfsTer20
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: TCC
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-50666574-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666574
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666574
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.882C>A
  hgvsp: ENST00000371821.1:c.882C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.867C>A
  hgvsp: ENST00000371823.4:c.867C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.834C>A
  hgvsp: ENST00000448907.2:c.834C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.840C>A
  hgvsp: ENST00000371819.1:c.840C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.876C>A
  hgvsp: ENST00000357083.4:c.876C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.825C>A
  hgvsp: ENST00000371824.1:c.825C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.825C>A
  hgvsp: ENST00000371827.1:c.825C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile292Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD

1-50666575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666575
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666575
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.841C>T
  hgvsp: ENSP00000360884.1:p.Pro281Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.826C>T
  hgvsp: ENSP00000360889.1:p.Pro276Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.868C>T
  hgvsp: ENSP00000360888.4:p.Pro290Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.826C>T
  hgvsp: ENSP00000360892.1:p.Pro276Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.835C>T
  hgvsp: ENSP00000399939.2:p.Pro279Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.883C>T
  hgvsp: ENSP00000360886.1:p.Pro295Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.877C>T
  hgvsp: ENSP00000349594.4:p.Pro293Ser
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro293Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-50666577-T-TGTTGGGGTGGGGTGGAGTCGGGGTGGGGTGGAGTCAGGTTGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666577
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666619
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: TGTTGGGGTGGGGTGGAGTCGGGGTGGGGTGGAGTCAGGTTGG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 9762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-50666587-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666587
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666587
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.895G>C
  hgvsp: ENSP00000360886.1:p.Gly299Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.847G>C
  hgvsp: ENSP00000399939.2:p.Gly283Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.880G>C
  hgvsp: ENSP00000360888.4:p.Gly294Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.838G>C
  hgvsp: ENSP00000360892.1:p.Gly280Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.889G>C
  hgvsp: ENSP00000349594.4:p.Gly297Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.838G>C
  hgvsp: ENSP00000360889.1:p.Gly280Arg
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.853G>C
  hgvsp: ENSP00000360884.1:p.Gly285Arg
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10094
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly297Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

1-50666605-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666605
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666605
    reference: chr 1
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.865T>G
  hgvsp: ENSP00000399939.2:p.Phe289Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.898T>G
  hgvsp: ENSP00000360888.4:p.Phe300Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.856T>G
  hgvsp: ENSP00000360889.1:p.Phe286Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.856T>G
  hgvsp: ENSP00000360892.1:p.Phe286Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.871T>G
  hgvsp: ENSP00000360884.1:p.Phe291Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.907T>G
  hgvsp: ENSP00000349594.4:p.Phe303Val
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.913T>G
  hgvsp: ENSP00000360886.1:p.Phe305Val
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe303Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-50666617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666617
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666617
    reference: chr 1
allele count: 4
allele frequency: 3.295653033648617e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.910C>T
  hgvsp: ENST00000371823.4:c.910C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.925C>T
  hgvsp: ENST00000371821.1:c.925C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.877C>T
  hgvsp: ENST00000448907.2:c.877C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.883C>T
  hgvsp: ENST00000371819.1:c.883C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.868C>T
  hgvsp: ENST00000371827.1:c.868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.868C>T
  hgvsp: ENST00000371824.1:c.868C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.919C>T
  hgvsp: ENST00000357083.4:c.919C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu307Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD

1-50666625-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666625
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666625
    reference: chr 1
allele count: 8
allele frequency: 6.59152330103487e-5
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.876C>T
  hgvsp: ENST00000371827.1:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.933C>T
  hgvsp: ENST00000371821.1:c.933C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.891C>T
  hgvsp: ENST00000371819.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.885C>T
  hgvsp: ENST00000448907.2:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.918C>T
  hgvsp: ENST00000371823.4:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.927C>T
  hgvsp: ENST00000357083.4:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.876C>T
  hgvsp: ENST00000371824.1:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro309Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-50666626-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666626
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666626
    reference: chr 1
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.892G>A
  hgvsp: ENSP00000360884.1:p.Asp298Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.886G>A
  hgvsp: ENSP00000399939.2:p.Asp296Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.919G>A
  hgvsp: ENSP00000360888.4:p.Asp307Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.877G>A
  hgvsp: ENSP00000360892.1:p.Asp293Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.934G>A
  hgvsp: ENSP00000360886.1:p.Asp312Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.928G>A
  hgvsp: ENSP00000349594.4:p.Asp310Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.877G>A
  hgvsp: ENSP00000360889.1:p.Asp293Asn
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp310Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-50666631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666631
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666631
    reference: chr 1
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.933C>T
  hgvsp: ENST00000357083.4:c.933C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.891C>T
  hgvsp: ENST00000448907.2:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.897C>T
  hgvsp: ENST00000371819.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.882C>T
  hgvsp: ENST00000371824.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.939C>T
  hgvsp: ENST00000371821.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.882C>T
  hgvsp: ENST00000371827.1:c.882C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.924C>T
  hgvsp: ENST00000371823.4:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser311Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-50666632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666632
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666632
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.925G>A
  hgvsp: ENSP00000360888.4:p.Asp309Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.940G>A
  hgvsp: ENSP00000360886.1:p.Asp314Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.892G>A
  hgvsp: ENSP00000399939.2:p.Asp298Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.883G>A
  hgvsp: ENSP00000360889.1:p.Asp295Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.883G>A
  hgvsp: ENSP00000360892.1:p.Asp295Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.898G>A
  hgvsp: ENSP00000360884.1:p.Asp300Asn
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.934G>A
  hgvsp: ENSP00000349594.4:p.Asp312Asn
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29340
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp312Asn
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-50666637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666637
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666637
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.930G>A
  hgvsp: ENST00000371823.4:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.888G>A
  hgvsp: ENST00000371827.1:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.903G>A
  hgvsp: ENST00000371819.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.888G>A
  hgvsp: ENST00000371824.1:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.897G>A
  hgvsp: ENST00000448907.2:c.897G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.945G>A
  hgvsp: ENST00000371821.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.939G>A
  hgvsp: ENST00000357083.4:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu313Glu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-50666642-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666642
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666642
    reference: chr 1
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.908T>C
  hgvsp: ENSP00000360884.1:p.Val303Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.935T>C
  hgvsp: ENSP00000360888.4:p.Val312Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.902T>C
  hgvsp: ENSP00000399939.2:p.Val301Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.893T>C
  hgvsp: ENSP00000360892.1:p.Val298Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.950T>C
  hgvsp: ENSP00000360886.1:p.Val317Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.893T>C
  hgvsp: ENSP00000360889.1:p.Val298Ala
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.944T>C
  hgvsp: ENSP00000349594.4:p.Val315Ala
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val315Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-50666652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666652
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666652
    reference: chr 1
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.912G>A
  hgvsp: ENST00000448907.2:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.918G>A
  hgvsp: ENST00000371819.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.903G>A
  hgvsp: ENST00000371824.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.954G>A
  hgvsp: ENST00000357083.4:c.954G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.903G>A
  hgvsp: ENST00000371827.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.960G>A
  hgvsp: ENST00000371821.1:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.945G>A
  hgvsp: ENST00000371823.4:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln318Gln
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-50666682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666682
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666682
    reference: chr 1
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.990C>T
  hgvsp: ENST00000371821.1:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.975C>T
  hgvsp: ENST00000371823.4:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.948C>T
  hgvsp: ENST00000371819.1:c.948C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.933C>T
  hgvsp: ENST00000371827.1:c.933C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.984C>T
  hgvsp: ENST00000357083.4:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.933C>T
  hgvsp: ENST00000371824.1:c.933C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.942C>T
  hgvsp: ENST00000448907.2:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn328Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-50666693-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666693
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666693
    reference: chr 1
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.944T>C
  hgvsp: ENSP00000360892.1:p.Ile315Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.944T>C
  hgvsp: ENSP00000360889.1:p.Ile315Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.953T>C
  hgvsp: ENSP00000399939.2:p.Ile318Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.959T>C
  hgvsp: ENSP00000360884.1:p.Ile320Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1001T>C
  hgvsp: ENSP00000360886.1:p.Ile334Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.986T>C
  hgvsp: ENSP00000360888.4:p.Ile329Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.995T>C
  hgvsp: ENSP00000349594.4:p.Ile332Thr
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45339
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile332Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/1-50666708-CCAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666708
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666705
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.978_980delCAA
  hgvsp: ENSP00000360884.1:p.Asn326del
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1005_1007delCAA
  hgvsp: ENSP00000360888.4:p.Asn335del
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1014_1016delCAA
  hgvsp: ENSP00000349594.4:p.Asn338del
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.963_965delCAA
  hgvsp: ENSP00000360892.1:p.Asn321del
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.963_965delCAA
  hgvsp: ENSP00000360889.1:p.Asn321del
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.972_974delCAA
  hgvsp: ENSP00000399939.2:p.Asn324del
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1020_1022delCAA
  hgvsp: ENSP00000360886.1:p.Asn340del
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45341
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn338del
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: CCAA
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-50666718-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666718
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666718
    reference: chr 1
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.984C>G
  hgvsp: ENSP00000360884.1:p.Cys328Trp
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1020C>G
  hgvsp: ENSP00000349594.4:p.Cys340Trp
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.978C>G
  hgvsp: ENSP00000399939.2:p.Cys326Trp
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1011C>G
  hgvsp: ENSP00000360888.4:p.Cys337Trp
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.969C>G
  hgvsp: ENSP00000360889.1:p.Cys323Trp
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1026C>G
  hgvsp: ENSP00000360886.1:p.Cys342Trp
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.969C>G
  hgvsp: ENSP00000360892.1:p.Cys323Trp
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45335
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys340Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

1-50666727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666727
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666727
    reference: chr 1
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1029C>T
  hgvsp: ENST00000357083.4:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1020C>T
  hgvsp: ENST00000371823.4:c.1020C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.993C>T
  hgvsp: ENST00000371819.1:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.987C>T
  hgvsp: ENST00000448907.2:c.987C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1035C>T
  hgvsp: ENST00000371821.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.978C>T
  hgvsp: ENST00000371827.1:c.978C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.978C>T
  hgvsp: ENST00000371824.1:c.978C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe343Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/1-50666730-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666730
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666730
    reference: chr 1
allele count: 4
allele frequency: 3.296739524610161e-5
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.990C>A
  hgvsp: ENST00000448907.2:c.990C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1032C>A
  hgvsp: ENST00000357083.4:c.1032C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1023C>A
  hgvsp: ENST00000371823.4:c.1023C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.981C>A
  hgvsp: ENST00000371824.1:c.981C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.996C>A
  hgvsp: ENST00000371819.1:c.996C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1038C>A
  hgvsp: ENST00000371821.1:c.1038C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.981C>A
  hgvsp: ENST00000371827.1:c.981C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10078
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly344Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-50666757-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666757
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666757
    reference: chr 1
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1008G>A
  hgvsp: ENST00000371827.1:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1065G>A
  hgvsp: ENST00000371821.1:c.1065G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1023G>A
  hgvsp: ENST00000371819.1:c.1023G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1008G>A
  hgvsp: ENST00000371824.1:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1059G>A
  hgvsp: ENST00000357083.4:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1050G>A
  hgvsp: ENST00000371823.4:c.1050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1017G>A
  hgvsp: ENST00000448907.2:c.1017G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu353Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

1-50666763-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666763
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666763
    reference: chr 1
allele count: 1
allele frequency: 8.280339162692104e-6
allele num: 120768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1029C>T
  hgvsp: ENST00000371819.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1056C>T
  hgvsp: ENST00000371823.4:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1071C>T
  hgvsp: ENST00000371821.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1065C>T
  hgvsp: ENST00000357083.4:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1014C>T
  hgvsp: ENST00000371824.1:c.1014C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1023C>T
  hgvsp: ENST00000448907.2:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1014C>T
  hgvsp: ENST00000371827.1:c.1014C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 29278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9813
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala355Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-50666772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666772
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666772
    reference: chr 1
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1032C>T
  hgvsp: ENST00000448907.2:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1080C>T
  hgvsp: ENST00000371821.1:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1074C>T
  hgvsp: ENST00000357083.4:c.1074C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1023C>T
  hgvsp: ENST00000371824.1:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1038C>T
  hgvsp: ENST00000371819.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1065C>T
  hgvsp: ENST00000371823.4:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1023C>T
  hgvsp: ENST00000371827.1:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile358Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-50666773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666773
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666773
    reference: chr 1
allele count: 3
allele frequency: 2.495798738789704e-5
allele num: 120202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1033G>A
  hgvsp: ENSP00000399939.2:p.Ala345Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1081G>A
  hgvsp: ENSP00000360886.1:p.Ala361Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1024G>A
  hgvsp: ENSP00000360892.1:p.Ala342Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1039G>A
  hgvsp: ENSP00000360884.1:p.Ala347Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1024G>A
  hgvsp: ENSP00000360889.1:p.Ala342Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1075G>A
  hgvsp: ENSP00000349594.4:p.Ala359Thr
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1066G>A
  hgvsp: ENSP00000360888.4:p.Ala356Thr
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala359Thr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum

1-50666784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666784
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666784
    reference: chr 1
allele count: 2
allele frequency: 1.680672268907563e-5
allele num: 119000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1092C>T
  hgvsp: ENST00000371821.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1086C>T
  hgvsp: ENST00000357083.4:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1050C>T
  hgvsp: ENST00000371819.1:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1077C>T
  hgvsp: ENST00000371823.4:c.1077C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1044C>T
  hgvsp: ENST00000448907.2:c.1044C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1035C>T
  hgvsp: ENST00000371824.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1035C>T
  hgvsp: ENST00000371827.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn362Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

1-50666792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666792
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666792
    reference: chr 1
allele count: 3
allele frequency: 2.541425231269696e-5
allele num: 118044
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1094G>A
  hgvsp: ENSP00000349594.4:p.Arg365His
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1085G>A
  hgvsp: ENSP00000360888.4:p.Arg362His
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1043G>A
  hgvsp: ENSP00000360889.1:p.Arg348His
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1052G>A
  hgvsp: ENSP00000399939.2:p.Arg351His
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1043G>A
  hgvsp: ENSP00000360892.1:p.Arg348His
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1100G>A
  hgvsp: ENSP00000360886.1:p.Arg367His
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1058G>A
  hgvsp: ENSP00000360884.1:p.Arg353His
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg365His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-50666806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666806
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666806
    reference: chr 1
allele count: 1
allele frequency: 8.630510581005972e-6
allele num: 115868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1066G>A
  hgvsp: ENSP00000399939.2:p.Val356Met
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1108G>A
  hgvsp: ENSP00000349594.4:p.Val370Met
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1057G>A
  hgvsp: ENSP00000360889.1:p.Val353Met
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1057G>A
  hgvsp: ENSP00000360892.1:p.Val353Met
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1099G>A
  hgvsp: ENSP00000360888.4:p.Val367Met
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1072G>A
  hgvsp: ENSP00000360884.1:p.Val358Met
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1114G>A
  hgvsp: ENSP00000360886.1:p.Val372Met
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val370Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

1-50666808-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666808
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666808
    reference: chr 1
allele count: 12
allele frequency: 1.036824552005391e-4
allele num: 115738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1101G>A
  hgvsp: ENST00000371823.4:c.1101G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1068G>A
  hgvsp: ENST00000448907.2:c.1068G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1116G>A
  hgvsp: ENST00000371821.1:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1059G>A
  hgvsp: ENST00000371824.1:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1110G>A
  hgvsp: ENST00000357083.4:c.1110G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1059G>A
  hgvsp: ENST00000371827.1:c.1059G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1074G>A
  hgvsp: ENST00000371819.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27855
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4660
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9260
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val370Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

1-50666829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666829
    reference: chr 1
allele count: 1
allele frequency: 8.9391068044481e-6
allele num: 111868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1089C>T
  hgvsp: ENST00000448907.2:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1080C>T
  hgvsp: ENST00000371827.1:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1122C>T
  hgvsp: ENST00000371823.4:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1095C>T
  hgvsp: ENST00000371819.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1080C>T
  hgvsp: ENST00000371824.1:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1137C>T
  hgvsp: ENST00000371821.1:c.1137C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1131C>T
  hgvsp: ENST00000357083.4:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26489
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr377Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

1-50666831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666831
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666831
    reference: chr 1
allele count: 3
allele frequency: 2.694594643145849e-5
allele num: 111334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360888
  ensembl transcript: ENST00000371823
  gene symbol: ELAVL4
  hgvsc: ENST00000371823.4:c.1124A>G
  hgvsp: ENSP00000360888.4:p.Asn375Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1082A>G
  hgvsp: ENSP00000360892.1:p.Asn361Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1082A>G
  hgvsp: ENSP00000360889.1:p.Asn361Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1133A>G
  hgvsp: ENSP00000349594.4:p.Asn378Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1097A>G
  hgvsp: ENSP00000360884.1:p.Asn366Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1091A>G
  hgvsp: ENSP00000399939.2:p.Asn364Ser
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1139A>G
  hgvsp: ENSP00000360886.1:p.Asn380Ser
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn378Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

1-50666832-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50666832
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 50666832
    reference: chr 1
allele count: 1
allele frequency: 8.994747067712457e-6
allele num: 111176
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000349594
  ensembl transcript: ENST00000357083
  gene symbol: ELAVL4
  hgvsc: ENST00000357083.4:c.1134C>T
  hgvsp: ENST00000357083.4:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360886
  ensembl transcript: ENST00000371821
  gene symbol: ELAVL4
  hgvsc: ENST00000371821.1:c.1140C>T
  hgvsp: ENST00000371821.1:c.1140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360892
  ensembl transcript: ENST00000371827
  gene symbol: ELAVL4
  hgvsc: ENST00000371827.1:c.1083C>T
  hgvsp: ENST00000371827.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360884
  ensembl transcript: ENST00000371819
  gene symbol: ELAVL4
  hgvsc: ENST00000371819.1:c.1098C>T
  hgvsp: ENST00000371819.1:c.1098C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000399939
  ensembl transcript: ENST00000448907
  gene symbol: ELAVL4
  hgvsc: ENST00000448907.2:c.1092C>T
  hgvsp: ENST00000448907.2:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162374
  ensembl protein: ENSP00000360889
  ensembl transcript: ENST00000371824
  gene symbol: ELAVL4
  hgvsc: ENST00000371824.1:c.1083C>T
  hgvsp: ENST00000371824.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3315
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Asn378Asn
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7965
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3665
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.769441187964049e-5
allele num: 10236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.548e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.579e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.348e0

QD
type: SiteQuality
SIO_000300: 1.467e1

DP
type: SiteQuality
SIO_000300: 1.98222e6

MQ
type: SiteQuality
SIO_000300: 5.923e1

FS
type: SiteQuality
SIO_000300: 9.667e0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25553
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7961
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66338
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.27e-1

FS
type: SiteQuality
SIO_000300: 6.422e0

QD
type: SiteQuality
SIO_000300: 6.26e0

VQSLOD
type: SiteQuality
SIO_000300: -2.155e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

DP
type: SiteQuality
SIO_000300: 1.980936e6

GenotypeQuality
all individuals: 1066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7944
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3651
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.958863858961802e-4
allele num: 10210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.884e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.9741e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.082e1

GenotypeQuality
all individuals: 364
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4902
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24843
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.557e0

QD
type: SiteQuality
SIO_000300: 1.371e1

FS
type: SiteQuality
SIO_000300: 2.068e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

DP
type: SiteQuality
SIO_000300: 1.958194e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4891
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3628
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7918
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2459
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.095e0

DP
type: SiteQuality
SIO_000300: 1.951576e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.227e1

FS
type: SiteQuality
SIO_000300: 2.291e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
all individuals: 1654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8549
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65650
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188495364868077e-4
allele num: 8414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e0

DP
type: SiteQuality
SIO_000300: 1.908824e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

FS
type: SiteQuality
SIO_000300: 2.114e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

GenotypeQuality
all individuals: 2637
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.825039542523421e-4
allele num: 16438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.356e0

FS
type: SiteQuality
SIO_000300: 3.032e0

VQSLOD
type: SiteQuality
SIO_000300: -1.592e0

MQRankSum
type: SiteQuality
SIO_000300: -1.034e0

MQ
type: SiteQuality
SIO_000300: 5.87e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.216e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

DP
type: SiteQuality
SIO_000300: 1.792123e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 24

GenotypeQuality
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GenotypeQuality
all individuals: 7230
bin: 6.25e1
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GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7972
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.941344778254649e-4
allele num: 11184
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.267573696145125e-3
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
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allele count: 13
allele frequency: 2.032393221186918e-4
allele num: 63964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

DP
type: SiteQuality
SIO_000300: 1.72634e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15800
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.736e-1

DP
type: SiteQuality
SIO_000300: 4.711706e6

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e0

FS
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66396
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 4.711706e6

FS
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.717e1

VQSLOD
type: SiteQuality
SIO_000300: -4.736e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.363e0

FS
type: SiteQuality
SIO_000300: 6.17e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

QD
type: SiteQuality
SIO_000300: 1.244e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.449e0

DP
type: SiteQuality
SIO_000300: 4.715874e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 134
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.154e0

FS
type: SiteQuality
SIO_000300: 1.33e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

DP
type: SiteQuality
SIO_000300: 4.737596e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.129704548240775e-5
allele num: 16314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

FS
type: SiteQuality
SIO_000300: 2.492e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.51e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

DP
type: SiteQuality
SIO_000300: 4.740327e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.221e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

South Asian
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allele frequency: 6.140243153628883e-5
allele num: 16286
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66470
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.097125867195243e-4
allele num: 16144
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.085e1

DP
type: SiteQuality
SIO_000300: 4.714144e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66272
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 890
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African
type: Population
allele count: 2
allele frequency: 1.938360147315371e-4
allele num: 10318
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15832
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43418
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15832
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.694018e6

VQSLOD
type: SiteQuality
SIO_000300: 9.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.97e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

QD
type: SiteQuality
SIO_000300: 1.327e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeQuality
all individuals: 670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017228374015629e-5
allele num: 66286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 9.82e-1

DP
type: SiteQuality
SIO_000300: 4.693609e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 1.573e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

GenotypeQuality
all individuals: 1947
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51410
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.068147831659902e-4
allele num: 9362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 8.222e0

DP
type: SiteQuality
SIO_000300: 6.87906e6

QD
type: SiteQuality
SIO_000300: 1.156e1

MQ
type: SiteQuality
SIO_000300: 5.916e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.241e-1

GenotypeQuality
all individuals: 402
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
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variant carriers: 0

GenotypeQuality
all individuals: 51410
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555790652809758e-5
allele num: 64276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

QD
type: SiteQuality
SIO_000300: 1.525e1

DP
type: SiteQuality
SIO_000300: 6.881289e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

FS
type: SiteQuality
SIO_000300: 6.206e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 2019
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
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variant carriers: 0

GenotypeQuality
all individuals: 542
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variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.184713375796178e-4
allele num: 9420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.218e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 6.881548e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
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variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51412
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.297e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.26e-1

FS
type: SiteQuality
SIO_000300: 5.39e-1

DP
type: SiteQuality
SIO_000300: 6.884291e6

VQSLOD
type: SiteQuality
SIO_000300: 9.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

GenotypeQuality
all individuals: 1356
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51417
bin: 9.75e1
variant carriers: 53

GenotypeQuality
all individuals: 2771
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.108292925525301e-5
allele num: 64344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.304574708644982e-3
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 36
allele frequency: 3.532182103610675e-3
allele num: 10192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 6.890017e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

QD
type: SiteQuality
SIO_000300: 1.318e1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

GenotypeQuality
all individuals: 1225
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.5e0
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GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 51397
bin: 9.75e1
variant carriers: 14

Latino
type: Population
allele count: 2
allele frequency: 1.739432944859976e-4
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.708658237286029e-4
allele num: 64378
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.79431929480901e-5
allele num: 10210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-3

QD
type: SiteQuality
SIO_000300: 1.257e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.829e0

DP
type: SiteQuality
SIO_000300: 6.889276e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
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GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.61e-1

MQ
type: SiteQuality
SIO_000300: 5.849e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e0

QD
type: SiteQuality
SIO_000300: 1.116e1

DP
type: SiteQuality
SIO_000300: 6.8905e6

FS
type: SiteQuality
SIO_000300: 9.942e0

VQSLOD
type: SiteQuality
SIO_000300: -1.487e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
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GenotypeQuality
all individuals: 220
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 6.75e1
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GenotypeQuality
all individuals: 191
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variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 6.25e1
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 671
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548371113588505e-5
allele num: 64584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
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South Asian
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allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
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BaseQRankSum
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SIO_000300: -3.94e0

MQRankSum
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SIO_000300: 9.98e-1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.315e1

MQ
type: SiteQuality
SIO_000300: 5.803e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11504
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.543686322939179e-5
allele num: 64780
num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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FS
type: SiteQuality
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DP
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64880
num of homozygotes: 0

South Asian
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allele frequency: 1.822489520685256e-4
allele num: 10974
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.686e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.904877e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 11080
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540879534038029e-5
allele num: 64898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
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BaseQRankSum
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SIO_000300: -4.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.043e-1

FS
type: SiteQuality
SIO_000300: 2.508e0

ClippingRankSum
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SIO_000300: 5.8e-1

DP
type: SiteQuality
SIO_000300: 6.905843e6

QD
type: SiteQuality
SIO_000300: 5.18e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 64936
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 1.067546583850932e-3
allele num: 10304
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 1.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 9.52e0

DP
type: SiteQuality
SIO_000300: 6.907681e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 8
allele frequency: 9.282896263634254e-4
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64936
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.907681e6

MQ
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.4e-3

BaseQRankSum
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SIO_000300: -2.302e0

MQRankSum
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SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 8.785802143735723e-5
allele num: 11382
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65048
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Latino
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allele frequency: 0.0e0
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East Asian
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Other
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ClippingRankSum
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FS
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QD
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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South Asian
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allele num: 11948
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East Asian
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Other
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allele num: 838
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VQSLOD
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FS
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BaseQRankSum
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QD
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DP
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 195

European (Finnish)
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allele count: 5549
allele frequency: 8.389779256123374e-1
allele num: 6614
num of homozygotes: 2327

South Asian
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allele frequency: 8.889377749842866e-1
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Other
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allele frequency: 8.631346578366446e-1
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African
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allele frequency: 4.068580235022154e-1
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European (Non-Finnish)
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allele count: 60812
allele frequency: 9.138340396116972e-1
allele num: 66546
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Latino
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allele frequency: 8.72581202487906e-1
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East Asian
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allele frequency: 6.538461538461539e-1
allele num: 8632
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66574
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Latino
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allele num: 11576
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European (Finnish)
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allele frequency: 0.0e0
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Other
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QD
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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FS
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DP
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.181233774261343e-5
allele num: 16178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.505704335294824e-5
allele num: 66616
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.737034e6

QD
type: SiteQuality
SIO_000300: 1.471e1

FS
type: SiteQuality
SIO_000300: 1.809e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.84e0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001831116981359e-5
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.991e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e0

VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.61e-2

QD
type: SiteQuality
SIO_000300: 1.659e1

DP
type: SiteQuality
SIO_000300: 1.741266e6

GenotypeQuality
all individuals: 662
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

VQSLOD
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.75e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.979e0

FS
type: SiteQuality
SIO_000300: 2.071e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

DP
type: SiteQuality
SIO_000300: 1.741422e6

QD
type: SiteQuality
SIO_000300: 1.393e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.88e-1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.563e0

QD
type: SiteQuality
SIO_000300: 2.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.902e0

DP
type: SiteQuality
SIO_000300: 1.743186e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 1.891e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.74e-1

GenotypeQuality
all individuals: 1808
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1598
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.261e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.745162e6

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

FS
type: SiteQuality
SIO_000300: 4.432e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.188e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10091
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1811
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.745256e6

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

FS
type: SiteQuality
SIO_000300: 2.563e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.535e0

QD
type: SiteQuality
SIO_000300: 1.418e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.744795e6

VQSLOD
type: SiteQuality
SIO_000300: -1.216e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.601e0

FS
type: SiteQuality
SIO_000300: 7.2974e1

MQRankSum
type: SiteQuality
SIO_000300: -9.753e0

MQ
type: SiteQuality
SIO_000300: 5.638e1

QD
type: SiteQuality
SIO_000300: 2.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.188e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.93e0

GenotypeQuality
all individuals: 665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 10097
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 717
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.706e0

QD
type: SiteQuality
SIO_000300: 1.268e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.744498e6

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.32e1

MQRankSum
type: SiteQuality
SIO_000300: 9.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.373e0

FS
type: SiteQuality
SIO_000300: 1.166e1

MQ
type: SiteQuality
SIO_000300: 5.99e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.628e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.25e-1

DP
type: SiteQuality
SIO_000300: 1.74441e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 250
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.426e1

FS
type: SiteQuality
SIO_000300: 7.3828e1

QD
type: SiteQuality
SIO_000300: 2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.891e0

MQ
type: SiteQuality
SIO_000300: 5.606e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.294e0

MQRankSum
type: SiteQuality
SIO_000300: -1.006e1

DP
type: SiteQuality
SIO_000300: 1.744464e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 9
bin: 2.75e1
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GenotypeQuality
all individuals: 1810
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e0

VQSLOD
type: SiteQuality
SIO_000300: -2.679e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.812e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.267e0

QD
type: SiteQuality
SIO_000300: 1.145e1

MQ
type: SiteQuality
SIO_000300: 5.855e1

DP
type: SiteQuality
SIO_000300: 1.744523e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10094
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GenotypeQuality
all individuals: 1600
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

QD
type: SiteQuality
SIO_000300: 1.458e1

FS
type: SiteQuality
SIO_000300: 1.3525e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.856e0

DP
type: SiteQuality
SIO_000300: 1.744124e6

MQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.35e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10096
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GenotypeQuality
all individuals: 712
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

QD
type: SiteQuality
SIO_000300: 1.269e1

DP
type: SiteQuality
SIO_000300: 1.744151e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 8.02e-1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 201
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.804920238324044e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 1.744205e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.55e-1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 664
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.41e1

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

FS
type: SiteQuality
SIO_000300: 1.179e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

DP
type: SiteQuality
SIO_000300: 1.743367e6

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.745e0

MQRankSum
type: SiteQuality
SIO_000300: -1.009e0

DP
type: SiteQuality
SIO_000300: 1.743329e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

QD
type: SiteQuality
SIO_000300: 1.408e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1804
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.743013e6

FS
type: SiteQuality
SIO_000300: 7.349e0

QD
type: SiteQuality
SIO_000300: 1.11e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.117e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.601e1

FS
type: SiteQuality
SIO_000300: 1.064e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.742903e6

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 200
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.742799e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.835e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.22e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 3.513e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 9.25e1
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GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.37e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

FS
type: SiteQuality
SIO_000300: 1.515e0

DP
type: SiteQuality
SIO_000300: 1.742748e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 1.475e1

MQRankSum
type: SiteQuality
SIO_000300: 5.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.943e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.647e0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.038e0

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-1

FS
type: SiteQuality
SIO_000300: 5.883e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

DP
type: SiteQuality
SIO_000300: 1.742582e6

QD
type: SiteQuality
SIO_000300: 1.509e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.176e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.742556e6

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.93e0

DP
type: SiteQuality
SIO_000300: 1.742401e6

QD
type: SiteQuality
SIO_000300: 1.593e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.619e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.737e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 684
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 655
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variant carriers: 0

GenotypeQuality
all individuals: 10097
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.24e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.463e0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.181e1

DP
type: SiteQuality
SIO_000300: 1.742162e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.48e1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.78e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.668e0

DP
type: SiteQuality
SIO_000300: 1.741741e6

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497885993583016e-5
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.057e1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.773e0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.233e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.439e0

DP
type: SiteQuality
SIO_000300: 1.74144e6

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.854e0

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.731527e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505525277769414e-5
allele num: 66422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.368e0

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.591e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.2746e1

QD
type: SiteQuality
SIO_000300: 1.14e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.722456e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.72762645914397e-5
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

FS
type: SiteQuality
SIO_000300: 1.547e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.181e1

DP
type: SiteQuality
SIO_000300: 1.709272e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.531722054380665e-5
allele num: 66200
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.997e0

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.707802e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.927e1

FS
type: SiteQuality
SIO_000300: 2.935e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.016e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.687438e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 1.286e1

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 2.923e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 299
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528257480820369e-5
allele num: 65434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516070345664039e-4
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.019e1

FS
type: SiteQuality
SIO_000300: 5.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.207e0

DP
type: SiteQuality
SIO_000300: 1.671729e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547556408431087e-5
allele num: 64618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.289e0

VQSLOD
type: SiteQuality
SIO_000300: -2.165e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

QD
type: SiteQuality
SIO_000300: 1.412e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.412e0

MQ
type: SiteQuality
SIO_000300: 5.823e1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

DP
type: SiteQuality
SIO_000300: 1.637602e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1646
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.407129455909944e-3
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

FS
type: SiteQuality
SIO_000300: 8.33e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 1.635946e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e0

QD
type: SiteQuality
SIO_000300: 1.218e1

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

GenotypeQuality
all individuals: 1512
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
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African
type: Population
allele count: 1
allele frequency: 1.036914143508917e-4
allele num: 9644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.124e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.575299e6

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62646
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.509200401472064e-4
allele num: 11956
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-2

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.308e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.562233e6