16-75271045-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271045
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271045
    reference: chr 16
allele count: 8
allele frequency: 1.774780370929098e-4
allele num: 45076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+36C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+36C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15446
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26994
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-75271051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271051
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271051
    reference: chr 16
allele count: 2
allele frequency: 4.754885645000238e-5
allele num: 42062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+30G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+30G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14582
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28204
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

16-75271052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271052
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271052
    reference: chr 16
allele count: 1
allele frequency: 2.404192912439294e-5
allele num: 41594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+29G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+29G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14469
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

16-75271060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271060
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271060
    reference: chr 16
allele count: 2
allele frequency: 5.396362851438131e-5
allele num: 37062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+21G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+21G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30786
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12944
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

16-75271061-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271061
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271061
    reference: chr 16
allele count: 3
allele frequency: 8.140670791273201e-5
allele num: 36852
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+20C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+20C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12857
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-75271061-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271061
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271061
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 36852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+20C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+20C>G
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31240
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

16-75271063-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271063
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271063
    reference: chr 16
allele count: 1
allele frequency: 2.727471088806459e-5
allele num: 36664
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+18A>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+18A>C
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12580
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

16-75271065-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271065
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271065
    reference: chr 16
allele count: 34
allele frequency: 9.47075208913649e-4
allele num: 35900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+16G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32376
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 9065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12400
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

16-75271066-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271066
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271066
    reference: chr 16
allele count: 6
allele frequency: 1.684352366515075e-4
allele num: 35622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+15C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+15C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8875
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12280
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32692
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-75271066-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271066
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271066
    reference: chr 16
allele count: 6
allele frequency: 1.684352366515075e-4
allele num: 35622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+15C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+15C>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32692
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8875
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12280
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

16-75271069-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271069
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271069
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 35632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.849+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1472+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.795+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.732+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.795+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.708+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.789+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.395+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.351+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.249+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.849+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.933+12G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.795+12G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8618
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

16-75271084-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271084
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271084
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 33796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.792G>A
  hgvsp: ENST00000162330.5:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.846G>A
  hgvsp: ENST00000393422.2:c.846G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.792G>A
  hgvsp: ENST00000393420.6:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.729G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.705G>A
  hgvsp: ENST00000546196.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.348G>A
  hgvsp: ENST00000535626.2:c.348G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.786G>A
  hgvsp: ENST00000542031.2:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.392G>A
  hgvsp: ENST00000569340.1:c.392G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.846G>A
  hgvsp: ENST00000420641.3:c.846G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.246G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1469G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.792G>A
  hgvsp: ENST00000538440.2:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.930G>A
  hgvsp: ENST00000418647.3:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 33187
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln310Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-75271088-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271088
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271088
    reference: chr 16
allele count: 1
allele frequency: 2.936685069893105e-5
allele num: 34052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.388G>A
  hgvsp: ENSP00000454702.1:p.Gly130Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.788G>A
  hgvsp: ENSP00000443841.2:p.Gly263Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.344G>A
  hgvsp: ENSP00000440370.2:p.Gly115Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.842G>A
  hgvsp: ENSP00000392708.3:p.Gly281Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.788G>A
  hgvsp: ENSP00000377072.6:p.Gly263Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.782G>A
  hgvsp: ENSP00000440415.2:p.Gly261Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.701G>A
  hgvsp: ENSP00000442161.1:p.Gly234Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.842G>A
  hgvsp: ENSP00000377074.2:p.Gly281Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.788G>A
  hgvsp: ENSP00000162330.5:p.Gly263Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.926G>A
  hgvsp: ENSP00000391669.3:p.Gly309Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.725G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1465G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.242G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly309Asp
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

16-75271091-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271091
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271091
    reference: chr 16
allele count: 1
allele frequency: 2.955082742316785e-5
allele num: 33840
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.385A>G
  hgvsp: ENSP00000454702.1:p.Tyr129Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.698A>G
  hgvsp: ENSP00000442161.1:p.Tyr233Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.839A>G
  hgvsp: ENSP00000392708.3:p.Tyr280Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.779A>G
  hgvsp: ENSP00000440415.2:p.Tyr260Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.785A>G
  hgvsp: ENSP00000443841.2:p.Tyr262Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.785A>G
  hgvsp: ENSP00000162330.5:p.Tyr262Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1462A>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.839A>G
  hgvsp: ENSP00000377074.2:p.Tyr280Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.341A>G
  hgvsp: ENSP00000440370.2:p.Tyr114Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.785A>G
  hgvsp: ENSP00000377072.6:p.Tyr262Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.722A>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.923A>G
  hgvsp: ENSP00000391669.3:p.Tyr308Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.239A>G
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr308Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

16-75271097-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271097
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271097
    reference: chr 16
allele count: 1
allele frequency: 3.082234003205523e-5
allele num: 32444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.773G>A
  hgvsp: ENSP00000440415.2:p.Ser258Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.833G>A
  hgvsp: ENSP00000392708.3:p.Ser278Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.379G>A
  hgvsp: ENSP00000454702.1:p.Ser127Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.833G>A
  hgvsp: ENSP00000377074.2:p.Ser278Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.779G>A
  hgvsp: ENSP00000377072.6:p.Ser260Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.779G>A
  hgvsp: ENSP00000443841.2:p.Ser260Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.335G>A
  hgvsp: ENSP00000440370.2:p.Ser112Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.692G>A
  hgvsp: ENSP00000442161.1:p.Ser231Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1456G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.233G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.917G>A
  hgvsp: ENSP00000391669.3:p.Ser306Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.716G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.779G>A
  hgvsp: ENSP00000162330.5:p.Ser260Asn
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser306Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

16-75271098-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271098
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271098
    reference: chr 16
allele count: 1
allele frequency: 3.084515731030228e-5
allele num: 32420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.232A>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.778A>G
  hgvsp: ENSP00000377072.6:p.Ser260Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.691A>G
  hgvsp: ENSP00000442161.1:p.Ser231Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.832A>G
  hgvsp: ENSP00000392708.3:p.Ser278Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.772A>G
  hgvsp: ENSP00000440415.2:p.Ser258Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.378A>G
  hgvsp: ENSP00000454702.1:p.Ser127Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.916A>G
  hgvsp: ENSP00000391669.3:p.Ser306Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.778A>G
  hgvsp: ENSP00000443841.2:p.Ser260Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.334A>G
  hgvsp: ENSP00000440370.2:p.Ser112Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.832A>G
  hgvsp: ENSP00000377074.2:p.Ser278Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1455A>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.778A>G
  hgvsp: ENSP00000162330.5:p.Ser260Gly
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.715A>G
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser306Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

16-75271102-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271102
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271102
    reference: chr 16
allele count: 6
allele frequency: 1.983602221634488e-4
allele num: 30248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.774T>C
  hgvsp: ENST00000393420.6:c.774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1451T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.330T>C
  hgvsp: ENST00000535626.2:c.330T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.774T>C
  hgvsp: ENST00000538440.2:c.774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.687T>C
  hgvsp: ENST00000546196.1:c.687T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.828T>C
  hgvsp: ENST00000420641.3:c.828T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.828T>C
  hgvsp: ENST00000393422.2:c.828T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.912T>C
  hgvsp: ENST00000418647.3:c.912T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.374T>C
  hgvsp: ENST00000569340.1:c.374T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.774T>C
  hgvsp: ENST00000162330.5:c.774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.711T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.228T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.768T>C
  hgvsp: ENST00000542031.2:c.768T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu304Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

16-75271105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271105
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271105
    reference: chr 16
allele count: 1
allele frequency: 3.273965426925092e-5
allele num: 30544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.825G>A
  hgvsp: ENST00000393422.2:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.765G>A
  hgvsp: ENST00000542031.2:c.765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.225G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.684G>A
  hgvsp: ENST00000546196.1:c.684G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.909G>A
  hgvsp: ENST00000418647.3:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.771G>A
  hgvsp: ENST00000538440.2:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.771G>A
  hgvsp: ENST00000162330.5:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.371G>A
  hgvsp: ENST00000569340.1:c.371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.327G>A
  hgvsp: ENST00000535626.2:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.825G>A
  hgvsp: ENST00000420641.3:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1448G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.771G>A
  hgvsp: ENST00000393420.6:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.708G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32669
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9635
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu303Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

16-75271111-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271111
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271111
    reference: chr 16
allele count: 1
allele frequency: 3.375413488152299e-5
allele num: 29626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.765G>A
  hgvsp: ENST00000162330.5:c.765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.819G>A
  hgvsp: ENST00000393422.2:c.819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.321G>A
  hgvsp: ENST00000535626.2:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.765G>A
  hgvsp: ENST00000393420.6:c.765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.365G>A
  hgvsp: ENST00000569340.1:c.365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.903G>A
  hgvsp: ENST00000418647.3:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1442G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.759G>A
  hgvsp: ENST00000542031.2:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.765G>A
  hgvsp: ENST00000538440.2:c.765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.219G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.819G>A
  hgvsp: ENST00000420641.3:c.819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.702G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.678G>A
  hgvsp: ENST00000546196.1:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg301Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-75271112-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271112
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271112
    reference: chr 16
allele count: 1
allele frequency: 3.416934326522244e-5
allele num: 29266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.701G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.764G>A
  hgvsp: ENSP00000162330.5:p.Arg255Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.364G>A
  hgvsp: ENSP00000454702.1:p.Arg122Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.677G>A
  hgvsp: ENSP00000442161.1:p.Arg226Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.320G>A
  hgvsp: ENSP00000440370.2:p.Arg107Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.218G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1441G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.758G>A
  hgvsp: ENSP00000440415.2:p.Arg253Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.902G>A
  hgvsp: ENSP00000391669.3:p.Arg301Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.818G>A
  hgvsp: ENSP00000392708.3:p.Arg273Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.764G>A
  hgvsp: ENSP00000377072.6:p.Arg255Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.818G>A
  hgvsp: ENSP00000377074.2:p.Arg273Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.764G>A
  hgvsp: ENSP00000443841.2:p.Arg255Gln
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg301Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

16-75271113-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271113
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271113
    reference: chr 16
allele count: 1
allele frequency: 3.480439927606849e-5
allele num: 28732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1440C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.817C>T
  hgvsp: ENSP00000392708.3:p.Arg273Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.817C>T
  hgvsp: ENSP00000377074.2:p.Arg273Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.763C>T
  hgvsp: ENSP00000377072.6:p.Arg255Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.676C>T
  hgvsp: ENSP00000442161.1:p.Arg226Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.901C>T
  hgvsp: ENSP00000391669.3:p.Arg301Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.319C>T
  hgvsp: ENSP00000440370.2:p.Arg107Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.363C>T
  hgvsp: ENSP00000454702.1:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.763C>T
  hgvsp: ENSP00000443841.2:p.Arg255Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.757C>T
  hgvsp: ENSP00000440415.2:p.Arg253Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.763C>T
  hgvsp: ENSP00000162330.5:p.Arg255Trp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.217C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.700C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg301Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

16-75271117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271117
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271117
    reference: chr 16
allele count: 1
allele frequency: 3.508771929824561e-5
allele num: 28500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.759G>A
  hgvsp: ENST00000393420.6:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.696G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.897G>A
  hgvsp: ENST00000418647.3:c.897G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.813G>A
  hgvsp: ENST00000393422.2:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.753G>A
  hgvsp: ENST00000542031.2:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.213G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.759G>A
  hgvsp: ENST00000538440.2:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.813G>A
  hgvsp: ENST00000420641.3:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1436G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.315G>A
  hgvsp: ENST00000535626.2:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.359G>A
  hgvsp: ENST00000569340.1:c.359G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.672G>A
  hgvsp: ENST00000546196.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.759G>A
  hgvsp: ENST00000162330.5:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12997
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro299Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

16-75271118-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271118
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271118
    reference: chr 16
allele count: 5
allele frequency: 1.778093883357041e-4
allele num: 28120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.758C>T
  hgvsp: ENSP00000162330.5:p.Pro253Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.896C>T
  hgvsp: ENSP00000391669.3:p.Pro299Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.358C>T
  hgvsp: ENSP00000454702.1:p.Pro120Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.758C>T
  hgvsp: ENSP00000443841.2:p.Pro253Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1435C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.752C>T
  hgvsp: ENSP00000440415.2:p.Pro251Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.212C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.812C>T
  hgvsp: ENSP00000392708.3:p.Pro271Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.812C>T
  hgvsp: ENSP00000377074.2:p.Pro271Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.695C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.758C>T
  hgvsp: ENSP00000377072.6:p.Pro253Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.671C>T
  hgvsp: ENSP00000442161.1:p.Pro224Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.314C>T
  hgvsp: ENSP00000440370.2:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32165
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13025
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro299Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-75271125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271125
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271125
    reference: chr 16
allele count: 1
allele frequency: 3.623188405797101e-5
allele num: 27600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1428G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.751G>A
  hgvsp: ENSP00000377072.6:p.Val251Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.664G>A
  hgvsp: ENSP00000442161.1:p.Val222Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.805G>A
  hgvsp: ENSP00000377074.2:p.Val269Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.351G>A
  hgvsp: ENSP00000454702.1:p.Val118Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.688G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.205G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.751G>A
  hgvsp: ENSP00000443841.2:p.Val251Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.889G>A
  hgvsp: ENSP00000391669.3:p.Val297Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.745G>A
  hgvsp: ENSP00000440415.2:p.Val249Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.751G>A
  hgvsp: ENSP00000162330.5:p.Val251Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.307G>A
  hgvsp: ENSP00000440370.2:p.Val103Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.805G>A
  hgvsp: ENSP00000392708.3:p.Val269Met
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32023
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val297Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ

16-75271144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271144
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271144
    reference: chr 16
allele count: 1
allele frequency: 4.310344827586207e-5
allele num: 23200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.870G>A
  hgvsp: ENST00000418647.3:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.786G>A
  hgvsp: ENST00000420641.3:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.332G>A
  hgvsp: ENST00000569340.1:c.332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.645G>A
  hgvsp: ENST00000546196.1:c.645G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.669G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.726G>A
  hgvsp: ENST00000542031.2:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.786G>A
  hgvsp: ENST00000393422.2:c.786G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.732G>A
  hgvsp: ENST00000538440.2:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.732G>A
  hgvsp: ENST00000393420.6:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.186G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.288G>A
  hgvsp: ENST00000535626.2:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.732G>A
  hgvsp: ENST00000162330.5:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1409G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly290Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

16-75271147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271147
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271147
    reference: chr 16
allele count: 1
allele frequency: 4.427129449265097e-5
allele num: 22588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.642G>A
  hgvsp: ENST00000546196.1:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.783G>A
  hgvsp: ENST00000420641.3:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.867G>A
  hgvsp: ENST00000418647.3:c.867G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.729G>A
  hgvsp: ENST00000393420.6:c.729G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.183G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.723G>A
  hgvsp: ENST00000542031.2:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.329G>A
  hgvsp: ENST00000569340.1:c.329G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.783G>A
  hgvsp: ENST00000393422.2:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.729G>A
  hgvsp: ENST00000538440.2:c.729G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.285G>A
  hgvsp: ENST00000535626.2:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.666G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.729G>A
  hgvsp: ENST00000162330.5:c.729G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1406G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro289Pro
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum

16-75271148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271148
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271148
    reference: chr 16
allele count: 2
allele frequency: 9.117432530999271e-5
allele num: 21936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.665C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.728C>T
  hgvsp: ENSP00000162330.5:p.Pro243Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1405C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.866C>T
  hgvsp: ENSP00000391669.3:p.Pro289Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.728C>T
  hgvsp: ENSP00000377072.6:p.Pro243Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.722C>T
  hgvsp: ENSP00000440415.2:p.Pro241Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.728C>T
  hgvsp: ENSP00000443841.2:p.Pro243Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.782C>T
  hgvsp: ENSP00000377074.2:p.Pro261Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.182C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.328C>T
  hgvsp: ENSP00000454702.1:p.Pro110Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.284C>T
  hgvsp: ENSP00000440370.2:p.Pro95Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.782C>T
  hgvsp: ENSP00000392708.3:p.Pro261Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.641C>T
  hgvsp: ENSP00000442161.1:p.Pro214Leu
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro289Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

16-75271148-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271148
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271148
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 21936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.665C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.866C>G
  hgvsp: ENSP00000391669.3:p.Pro289Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.328C>G
  hgvsp: ENSP00000454702.1:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1405C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.641C>G
  hgvsp: ENSP00000442161.1:p.Pro214Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.782C>G
  hgvsp: ENSP00000377074.2:p.Pro261Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.782C>G
  hgvsp: ENSP00000392708.3:p.Pro261Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.284C>G
  hgvsp: ENSP00000440370.2:p.Pro95Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.722C>G
  hgvsp: ENSP00000440415.2:p.Pro241Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.728C>G
  hgvsp: ENSP00000443841.2:p.Pro243Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.728C>G
  hgvsp: ENSP00000377072.6:p.Pro243Arg
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.182C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.728C>G
  hgvsp: ENSP00000162330.5:p.Pro243Arg
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31184
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro289Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

16-75271153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271153
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271153
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 22022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.723G>A
  hgvsp: ENST00000538440.2:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1400G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.723G>A
  hgvsp: ENST00000162330.5:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.323G>A
  hgvsp: ENST00000569340.1:c.323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.636G>A
  hgvsp: ENST00000546196.1:c.636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.279G>A
  hgvsp: ENST00000535626.2:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.177G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.777G>A
  hgvsp: ENST00000420641.3:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.861G>A
  hgvsp: ENST00000418647.3:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.777G>A
  hgvsp: ENST00000393422.2:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.723G>A
  hgvsp: ENST00000393420.6:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.717G>A
  hgvsp: ENST00000542031.2:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.660G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 31486
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu287Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD

16-75271155-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271155
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271155
    reference: chr 16
allele count: 5
allele frequency: 2.288748512313467e-4
allele num: 21846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.775C>G
  hgvsp: ENSP00000377074.2:p.Leu259Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.277C>G
  hgvsp: ENSP00000440370.2:p.Leu93Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.658C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.721C>G
  hgvsp: ENSP00000443841.2:p.Leu241Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.721C>G
  hgvsp: ENSP00000377072.6:p.Leu241Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.859C>G
  hgvsp: ENSP00000391669.3:p.Leu287Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.634C>G
  hgvsp: ENSP00000442161.1:p.Leu212Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.775C>G
  hgvsp: ENSP00000392708.3:p.Leu259Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.721C>G
  hgvsp: ENSP00000162330.5:p.Leu241Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.715C>G
  hgvsp: ENSP00000440415.2:p.Leu239Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.321C>G
  hgvsp: ENSP00000454702.1:p.Leu108Val
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.175C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1398C>G
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31587
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu287Val
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

16-75271159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271159
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271159
    reference: chr 16
allele count: 1
allele frequency: 4.525296406914653e-5
allele num: 22098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.717C>T
  hgvsp: ENST00000393420.6:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.771C>T
  hgvsp: ENST00000393422.2:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.771C>T
  hgvsp: ENST00000420641.3:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.171C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.855C>T
  hgvsp: ENST00000418647.3:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.317C>T
  hgvsp: ENST00000569340.1:c.317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.711C>T
  hgvsp: ENST00000542031.2:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.630C>T
  hgvsp: ENST00000546196.1:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.717C>T
  hgvsp: ENST00000538440.2:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.273C>T
  hgvsp: ENST00000535626.2:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.717C>T
  hgvsp: ENST00000162330.5:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1394C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.654C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His285His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

16-75271163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271163
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271163
    reference: chr 16
allele count: 2
allele frequency: 9.388789784996713e-5
allele num: 21302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.713G>A
  hgvsp: ENSP00000162330.5:p.Arg238Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.767G>A
  hgvsp: ENSP00000377074.2:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.313G>A
  hgvsp: ENSP00000454702.1:p.Arg105Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.650G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.626G>A
  hgvsp: ENSP00000442161.1:p.Arg209Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.707G>A
  hgvsp: ENSP00000440415.2:p.Arg236Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.713G>A
  hgvsp: ENSP00000377072.6:p.Arg238Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1390G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.851G>A
  hgvsp: ENSP00000391669.3:p.Arg284Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.767G>A
  hgvsp: ENSP00000392708.3:p.Arg256Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.713G>A
  hgvsp: ENSP00000443841.2:p.Arg238Gln
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.167G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.269G>A
  hgvsp: ENSP00000440370.2:p.Arg90Gln
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32323
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg284Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

16-75271165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271165
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271165
    reference: chr 16
allele count: 3
allele frequency: 1.396258028483664e-4
allele num: 21486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.165G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.711G>A
  hgvsp: ENST00000393420.6:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.849G>A
  hgvsp: ENST00000418647.3:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.705G>A
  hgvsp: ENST00000542031.2:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.711G>A
  hgvsp: ENST00000162330.5:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.311G>A
  hgvsp: ENST00000569340.1:c.311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.624G>A
  hgvsp: ENST00000546196.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1388G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.267G>A
  hgvsp: ENST00000535626.2:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.765G>A
  hgvsp: ENST00000393422.2:c.765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.765G>A
  hgvsp: ENST00000420641.3:c.765G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.648G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.711G>A
  hgvsp: ENST00000538440.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15850
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32673
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro283Pro
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

16-75271166-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271166
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271166
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 21550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.710C>T
  hgvsp: ENSP00000443841.2:p.Pro237Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.710C>T
  hgvsp: ENSP00000162330.5:p.Pro237Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.647C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.310C>T
  hgvsp: ENSP00000454702.1:p.Pro104Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1387C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.623C>T
  hgvsp: ENSP00000442161.1:p.Pro208Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.710C>T
  hgvsp: ENSP00000377072.6:p.Pro237Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.764C>T
  hgvsp: ENSP00000392708.3:p.Pro255Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.848C>T
  hgvsp: ENSP00000391669.3:p.Pro283Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.704C>T
  hgvsp: ENSP00000440415.2:p.Pro235Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.764C>T
  hgvsp: ENSP00000377074.2:p.Pro255Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.266C>T
  hgvsp: ENSP00000440370.2:p.Pro89Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.164C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32858
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro283Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

16-75271173-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271173
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271173
    reference: chr 16
allele count: 1
allele frequency: 4.636498516320475e-5
allele num: 21568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.757G>A
  hgvsp: ENSP00000392708.3:p.Asp253Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.616G>A
  hgvsp: ENSP00000442161.1:p.Asp206Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.157G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.703G>A
  hgvsp: ENSP00000443841.2:p.Asp235Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.757G>A
  hgvsp: ENSP00000377074.2:p.Asp253Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.303G>A
  hgvsp: ENSP00000454702.1:p.Asp102Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.703G>A
  hgvsp: ENSP00000162330.5:p.Asp235Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.259G>A
  hgvsp: ENSP00000440370.2:p.Asp87Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.640G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.703G>A
  hgvsp: ENSP00000377072.6:p.Asp235Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.841G>A
  hgvsp: ENSP00000391669.3:p.Asp281Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.697G>A
  hgvsp: ENSP00000440415.2:p.Asp233Asn
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1380G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15036
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp281Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

16-75271177-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271177
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271177
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 21774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.699G>C
  hgvsp: ENSP00000162330.5:p.Glu233Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1376G>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.255G>C
  hgvsp: ENSP00000440370.2:p.Glu85Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.699G>C
  hgvsp: ENSP00000377072.6:p.Glu233Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.837G>C
  hgvsp: ENSP00000391669.3:p.Glu279Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.299G>C
  hgvsp: ENSP00000454702.1:p.Glu100Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.693G>C
  hgvsp: ENSP00000440415.2:p.Glu231Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.153G>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.699G>C
  hgvsp: ENSP00000443841.2:p.Glu233Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.753G>C
  hgvsp: ENSP00000377074.2:p.Glu251Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.612G>C
  hgvsp: ENSP00000442161.1:p.Glu204Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.636G>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.753G>C
  hgvsp: ENSP00000392708.3:p.Glu251Asp
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34004
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu279Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

16-75271179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271179
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271179
    reference: chr 16
allele count: 6
allele frequency: 2.781125428756837e-4
allele num: 21574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.697G>A
  hgvsp: ENSP00000377072.6:p.Glu233Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.697G>A
  hgvsp: ENSP00000443841.2:p.Glu233Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.691G>A
  hgvsp: ENSP00000440415.2:p.Glu231Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.610G>A
  hgvsp: ENSP00000442161.1:p.Glu204Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.751G>A
  hgvsp: ENSP00000377074.2:p.Glu251Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.751G>A
  hgvsp: ENSP00000392708.3:p.Glu251Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.697G>A
  hgvsp: ENSP00000162330.5:p.Glu233Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.297G>A
  hgvsp: ENSP00000454702.1:p.Glu100Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1374G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.151G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.253G>A
  hgvsp: ENSP00000440370.2:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.835G>A
  hgvsp: ENSP00000391669.3:p.Glu279Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.634G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu279Lys
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

16-75271180-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271180
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271180
    reference: chr 16
allele count: 1
allele frequency: 4.55913194127838e-5
allele num: 21934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.696C>T
  hgvsp: ENST00000162330.5:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.696C>T
  hgvsp: ENST00000393420.6:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.296C>T
  hgvsp: ENST00000569340.1:c.296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.690C>T
  hgvsp: ENST00000542031.2:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.150C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.696C>T
  hgvsp: ENST00000538440.2:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.750C>T
  hgvsp: ENST00000393422.2:c.750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.834C>T
  hgvsp: ENST00000418647.3:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.609C>T
  hgvsp: ENST00000546196.1:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1373C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.750C>T
  hgvsp: ENST00000420641.3:c.750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.252C>T
  hgvsp: ENST00000535626.2:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.633C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp278Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-75271189-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271189
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271189
    reference: chr 16
allele count: 12
allele frequency: 5.420054200542005e-4
allele num: 22140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1364G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.687G>A
  hgvsp: ENST00000538440.2:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.600G>A
  hgvsp: ENST00000546196.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.141G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.243G>A
  hgvsp: ENST00000535626.2:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.825G>A
  hgvsp: ENST00000418647.3:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.681G>A
  hgvsp: ENST00000542031.2:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.287G>A
  hgvsp: ENST00000569340.1:c.287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.624G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.687G>A
  hgvsp: ENST00000162330.5:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.687G>A
  hgvsp: ENST00000393420.6:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.741G>A
  hgvsp: ENST00000420641.3:c.741G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.741G>A
  hgvsp: ENST00000393422.2:c.741G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35193
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 13039
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6527
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro275Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

16-75271190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271190
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271190
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 22544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.686C>T
  hgvsp: ENSP00000377072.6:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.824C>T
  hgvsp: ENSP00000391669.3:p.Pro275Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.242C>T
  hgvsp: ENSP00000440370.2:p.Pro81Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1363C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.686C>T
  hgvsp: ENSP00000443841.2:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.599C>T
  hgvsp: ENSP00000442161.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.686C>T
  hgvsp: ENSP00000162330.5:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.740C>T
  hgvsp: ENSP00000377074.2:p.Pro247Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.740C>T
  hgvsp: ENSP00000392708.3:p.Pro247Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.623C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.286C>T
  hgvsp: ENSP00000454702.1:p.Pro96Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.680C>T
  hgvsp: ENSP00000440415.2:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.140C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35522
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro275Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

16-75271197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271197
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271197
    reference: chr 16
allele count: 11
allele frequency: 4.787187744799373e-4
allele num: 22978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.235G>A
  hgvsp: ENSP00000440370.2:p.Ala79Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.679G>A
  hgvsp: ENSP00000443841.2:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.673G>A
  hgvsp: ENSP00000440415.2:p.Ala225Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.733G>A
  hgvsp: ENSP00000377074.2:p.Ala245Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.679G>A
  hgvsp: ENSP00000162330.5:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.279G>A
  hgvsp: ENSP00000454702.1:p.Ala94Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.592G>A
  hgvsp: ENSP00000442161.1:p.Ala198Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.817G>A
  hgvsp: ENSP00000391669.3:p.Ala273Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1356G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.616G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.679G>A
  hgvsp: ENSP00000377072.6:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.133G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.733G>A
  hgvsp: ENSP00000392708.3:p.Ala245Thr
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36102
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Ala273Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

16-75271198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271198
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271198
    reference: chr 16
allele count: 1
allele frequency: 4.286326618088299e-5
allele num: 23330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.278C>T
  hgvsp: ENST00000569340.1:c.278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.678C>T
  hgvsp: ENST00000393420.6:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.732C>T
  hgvsp: ENST00000420641.3:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.591C>T
  hgvsp: ENST00000546196.1:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.678C>T
  hgvsp: ENST00000538440.2:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.672C>T
  hgvsp: ENST00000542031.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.732C>T
  hgvsp: ENST00000393422.2:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.816C>T
  hgvsp: ENST00000418647.3:c.816C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.678C>T
  hgvsp: ENST00000162330.5:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.615C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.234C>T
  hgvsp: ENST00000535626.2:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1355C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.132C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala272Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

16-75271203-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271203
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271203
    reference: chr 16
allele count: 2
allele frequency: 8.376612497905847e-5
allele num: 23876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.273G>A
  hgvsp: ENSP00000454702.1:p.Glu92Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.610G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.727G>A
  hgvsp: ENSP00000377074.2:p.Glu243Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.673G>A
  hgvsp: ENSP00000443841.2:p.Glu225Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.586G>A
  hgvsp: ENSP00000442161.1:p.Glu196Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.673G>A
  hgvsp: ENSP00000377072.6:p.Glu225Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1350G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.229G>A
  hgvsp: ENSP00000440370.2:p.Glu77Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.127G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.667G>A
  hgvsp: ENSP00000440415.2:p.Glu223Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.673G>A
  hgvsp: ENSP00000162330.5:p.Glu225Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.811G>A
  hgvsp: ENSP00000391669.3:p.Glu271Lys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.727G>A
  hgvsp: ENSP00000392708.3:p.Glu243Lys
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu271Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

16-75271210-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271210
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271210
    reference: chr 16
allele count: 1
allele frequency: 4.041710451863228e-5
allele num: 24742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.720T>C
  hgvsp: ENST00000393422.2:c.720T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.660T>C
  hgvsp: ENST00000542031.2:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.266T>C
  hgvsp: ENST00000569340.1:c.266T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.666T>C
  hgvsp: ENST00000538440.2:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1343T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.120T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.603T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.720T>C
  hgvsp: ENST00000420641.3:c.720T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.804T>C
  hgvsp: ENST00000418647.3:c.804T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.666T>C
  hgvsp: ENST00000393420.6:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.666T>C
  hgvsp: ENST00000162330.5:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.222T>C
  hgvsp: ENST00000535626.2:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.579T>C
  hgvsp: ENST00000546196.1:c.579T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr268Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

16-75271213-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271213
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271213
    reference: chr 16
allele count: 16
allele frequency: 6.427251546557404e-4
allele num: 24894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.657C>T
  hgvsp: ENST00000542031.2:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1340C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.663C>T
  hgvsp: ENST00000538440.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.717C>T
  hgvsp: ENST00000420641.3:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.663C>T
  hgvsp: ENST00000162330.5:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.717C>T
  hgvsp: ENST00000393422.2:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.600C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.801C>T
  hgvsp: ENST00000418647.3:c.801C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.576C>T
  hgvsp: ENST00000546196.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.263C>T
  hgvsp: ENST00000569340.1:c.263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.663C>T
  hgvsp: ENST00000393420.6:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.117C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.219C>T
  hgvsp: ENST00000535626.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6757
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 37540
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly267Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

16-75271214-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271214
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271214
    reference: chr 16
allele count: 2
allele frequency: 8.093234056328909e-5
allele num: 24712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.262G>A
  hgvsp: ENSP00000454702.1:p.Gly88Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.656G>A
  hgvsp: ENSP00000440415.2:p.Gly219Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.575G>A
  hgvsp: ENSP00000442161.1:p.Gly192Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1339G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.716G>A
  hgvsp: ENSP00000377074.2:p.Gly239Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.800G>A
  hgvsp: ENSP00000391669.3:p.Gly267Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.662G>A
  hgvsp: ENSP00000162330.5:p.Gly221Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.662G>A
  hgvsp: ENSP00000377072.6:p.Gly221Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.662G>A
  hgvsp: ENSP00000443841.2:p.Gly221Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.599G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.116G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.218G>A
  hgvsp: ENSP00000440370.2:p.Gly73Asp
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.716G>A
  hgvsp: ENSP00000392708.3:p.Gly239Asp
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly267Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

16-75271219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271219
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271219
    reference: chr 16
allele count: 6
allele frequency: 2.39942413820683e-4
allele num: 25006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.257G>A
  hgvsp: ENST00000569340.1:c.257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.711G>A
  hgvsp: ENST00000393422.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.795G>A
  hgvsp: ENST00000418647.3:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.657G>A
  hgvsp: ENST00000538440.2:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.711G>A
  hgvsp: ENST00000420641.3:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1334G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.657G>A
  hgvsp: ENST00000162330.5:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.213G>A
  hgvsp: ENST00000535626.2:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.657G>A
  hgvsp: ENST00000393420.6:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.570G>A
  hgvsp: ENST00000546196.1:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.651G>A
  hgvsp: ENST00000542031.2:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.111G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.594G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37011
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly265Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

16-75271224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271224
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271224
    reference: chr 16
allele count: 2
allele frequency: 8.091269520187717e-5
allele num: 24718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1329G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.565G>A
  hgvsp: ENSP00000442161.1:p.Val189Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.208G>A
  hgvsp: ENSP00000440370.2:p.Val70Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.652G>A
  hgvsp: ENSP00000443841.2:p.Val218Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.706G>A
  hgvsp: ENSP00000377074.2:p.Val236Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.106G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.646G>A
  hgvsp: ENSP00000440415.2:p.Val216Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.589G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.652G>A
  hgvsp: ENSP00000377072.6:p.Val218Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.252G>A
  hgvsp: ENSP00000454702.1:p.Val85Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.790G>A
  hgvsp: ENSP00000391669.3:p.Val264Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.706G>A
  hgvsp: ENSP00000392708.3:p.Val236Met
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.652G>A
  hgvsp: ENSP00000162330.5:p.Val218Met
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10524
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val264Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-75271226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271226
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271226
    reference: chr 16
allele count: 4
allele frequency: 1.612253123740427e-4
allele num: 24810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.644G>A
  hgvsp: ENSP00000440415.2:p.Arg215His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.104G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.206G>A
  hgvsp: ENSP00000440370.2:p.Arg69His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.704G>A
  hgvsp: ENSP00000392708.3:p.Arg235His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.250G>A
  hgvsp: ENSP00000454702.1:p.Arg84His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.650G>A
  hgvsp: ENSP00000377072.6:p.Arg217His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.650G>A
  hgvsp: ENSP00000162330.5:p.Arg217His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.650G>A
  hgvsp: ENSP00000443841.2:p.Arg217His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.788G>A
  hgvsp: ENSP00000391669.3:p.Arg263His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.563G>A
  hgvsp: ENSP00000442161.1:p.Arg188His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.704G>A
  hgvsp: ENSP00000377074.2:p.Arg235His
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.587G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1327G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36508
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg263His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-75271227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271227
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271227
    reference: chr 16
allele count: 2
allele frequency: 8.025682182985554e-5
allele num: 24920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.649C>T
  hgvsp: ENSP00000377072.6:p.Arg217Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.703C>T
  hgvsp: ENSP00000377074.2:p.Arg235Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.643C>T
  hgvsp: ENSP00000440415.2:p.Arg215Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.205C>T
  hgvsp: ENSP00000440370.2:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.787C>T
  hgvsp: ENSP00000391669.3:p.Arg263Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.703C>T
  hgvsp: ENSP00000392708.3:p.Arg235Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1326C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.586C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.249C>T
  hgvsp: ENSP00000454702.1:p.Arg84Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.562C>T
  hgvsp: ENSP00000442161.1:p.Arg188Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.649C>T
  hgvsp: ENSP00000162330.5:p.Arg217Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.649C>T
  hgvsp: ENSP00000443841.2:p.Arg217Cys
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.103C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36507
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg263Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-75271233-GCAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271233
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271230
    reference: chr 16
allele count: 1
allele frequency: 4.053177691309987e-5
allele num: 24672
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.640_642delGTG
  hgvsp: ENSP00000443841.2:p.Val214del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.634_636delGTG
  hgvsp: ENSP00000440415.2:p.Val212del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.577_579delGTG
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.640_642delGTG
  hgvsp: ENSP00000162330.5:p.Val214del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1317_*1319delGTG
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.778_780delGTG
  hgvsp: ENSP00000391669.3:p.Val260del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.694_696delGTG
  hgvsp: ENSP00000377074.2:p.Val232del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.94_96delGTG
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.640_642delGTG
  hgvsp: ENSP00000377072.6:p.Val214del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.196_198delGTG
  hgvsp: ENSP00000440370.2:p.Val66del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.240_242delGTG
  hgvsp: ENSP00000454702.1:p.Val81del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.694_696delGTG
  hgvsp: ENSP00000392708.3:p.Val232del
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.553_555delGTG
  hgvsp: ENSP00000442161.1:p.Val185del
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val260del
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: GCAC
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

16-75271235-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271235
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271235
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 24718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.641T>A
  hgvsp: ENSP00000443841.2:p.Val214Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.695T>A
  hgvsp: ENSP00000392708.3:p.Val232Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.578T>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1318T>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.695T>A
  hgvsp: ENSP00000377074.2:p.Val232Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.95T>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.241T>A
  hgvsp: ENSP00000454702.1:p.Val81Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.635T>A
  hgvsp: ENSP00000440415.2:p.Val212Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.779T>A
  hgvsp: ENSP00000391669.3:p.Val260Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.641T>A
  hgvsp: ENSP00000377072.6:p.Val214Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.197T>A
  hgvsp: ENSP00000440370.2:p.Val66Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.554T>A
  hgvsp: ENSP00000442161.1:p.Val185Glu
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.641T>A
  hgvsp: ENSP00000162330.5:p.Val214Glu
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35581
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val260Glu
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-75271240-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271240
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271240
    reference: chr 16
allele count: 1
allele frequency: 4.159041756779238e-5
allele num: 24044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.636G>T
  hgvsp: ENST00000162330.5:c.636G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.636G>T
  hgvsp: ENST00000538440.2:c.636G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.630G>T
  hgvsp: ENST00000542031.2:c.630G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.774G>T
  hgvsp: ENST00000418647.3:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.690G>T
  hgvsp: ENST00000393422.2:c.690G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.573G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.549G>T
  hgvsp: ENST00000546196.1:c.549G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.192G>T
  hgvsp: ENST00000535626.2:c.192G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.90G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.236G>T
  hgvsp: ENST00000569340.1:c.236G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.690G>T
  hgvsp: ENST00000420641.3:c.690G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.636G>T
  hgvsp: ENST00000393420.6:c.636G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1313G>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.774G>T
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

16-75271247-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271247
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271247
    reference: chr 16
allele count: 2
allele frequency: 8.469551960701279e-5
allele num: 23614
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.83C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-5C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-5C>G
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.772-5C>G
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/16-75271250-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271250
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271250
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 22944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.80G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-8G>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-8G>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32432
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.772-8G>T
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

16-75271254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271254
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271254
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 22670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.76C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-12C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-12C>T
  variant of: http://identifiers.org/hgnc/971
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 16249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31762
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-75271258-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271258
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271258
    reference: chr 16
allele count: 3
allele frequency: 1.377157546823357e-4
allele num: 21784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.72G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-16G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-16G>A
  variant of: http://identifiers.org/hgnc/971
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30458
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

16-75271259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271259
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271259
    reference: chr 16
allele count: 69
allele frequency: 3.2069157836029e-3
allele num: 21516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.71C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-17C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-17C>T
  variant of: http://identifiers.org/hgnc/971
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18132
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 1.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30078
  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/16-75271278-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271278
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271278
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 17238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.52T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-36T>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-36T>G
  variant of: http://identifiers.org/hgnc/971
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26392
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

16-75271289-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271289
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271289
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 14362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.41T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-47T>C
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-47T>C
  variant of: http://identifiers.org/hgnc/971
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23754
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27021
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-75271292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271292
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271292
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 13644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000564170
  gene symbol: BCAR1
  hgvsc: ENST00000564170.1:n.38C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.571-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-50C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-50C>T
  variant of: http://identifiers.org/hgnc/971
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27102
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23802
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

16-75271941-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271941
    reference: chr 16
allele count: 2
allele frequency: 1.175502527330434e-4
allele num: 17014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.570+48C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-699C>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-699C>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

16-75271951-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271951
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271951
    reference: chr 16
allele count: 1
allele frequency: 5.882352941176471e-5
allele num: 17000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.570+38C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-709C>G
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-709C>G
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-75271965-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271965
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271965
    reference: chr 16
allele count: 4
allele frequency: 2.359882005899705e-4
allele num: 16950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.570+24G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-723G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-723G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

16-75271969-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271969
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271969
    reference: chr 16
allele count: 1
allele frequency: 5.90388475616956e-5
allele num: 16938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.570+20G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-727G>A
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-727G>A
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP

16-75271978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75271978
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 75271978
    reference: chr 16
allele count: 2
allele frequency: 1.182033096926714e-4
allele num: 16920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440370
  ensembl transcript: ENST00000535626
  gene symbol: BCAR1
  hgvsc: ENST00000535626.2:c.190-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377072
  ensembl transcript: ENST00000393420
  gene symbol: BCAR1
  hgvsc: ENST00000393420.6:c.634-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000391669
  ensembl transcript: ENST00000418647
  gene symbol: BCAR1
  hgvsc: ENST00000418647.3:c.772-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000442161
  ensembl transcript: ENST00000546196
  gene symbol: BCAR1
  hgvsc: ENST00000546196.1:c.547-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000162330
  ensembl transcript: ENST00000162330
  gene symbol: BCAR1
  hgvsc: ENST00000162330.5:c.634-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000392708
  ensembl transcript: ENST00000420641
  gene symbol: BCAR1
  hgvsc: ENST00000420641.3:c.688-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000440415
  ensembl transcript: ENST00000542031
  gene symbol: BCAR1
  hgvsc: ENST00000542031.2:c.628-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000443841
  ensembl transcript: ENST00000538440
  gene symbol: BCAR1
  hgvsc: ENST00000538440.2:c.634-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000454702
  ensembl transcript: ENST00000569340
  gene symbol: BCAR1
  hgvsc: ENST00000569340.1:c.234-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000455166
  ensembl transcript: ENST00000562556
  gene symbol: BCAR1
  hgvsc: ENST00000562556.1:c.*1311-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl protein: ENSP00000377074
  ensembl transcript: ENST00000393422
  gene symbol: BCAR1
  hgvsc: ENST00000393422.2:c.688-736C>T
  variant of: http://identifiers.org/hgnc/971
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000050820
  ensembl transcript: ENST00000566982
  gene symbol: BCAR1
  hgvsc: ENST00000566982.1:n.570+11C>T
  variant of: http://identifiers.org/hgnc/971
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 297
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2728
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2790
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4484
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 2.066115702479339e-3
allele num: 3872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1954
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.73e0

DP
type: SiteQuality
SIO_000300: 5.93093e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.264e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.134e0

FS
type: SiteQuality
SIO_000300: 1.0856e1

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.06e-2

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2961
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 1

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 25392
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 6.480881399870382e-4
allele num: 3086
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1758
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
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InbreedingCoeff
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SIO_000300: -2.04e-2

MQRankSum
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SIO_000300: 6.8e-2

BaseQRankSum
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SIO_000300: -9.370000000000001e-1

ClippingRankSum
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SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.44e-1

QD
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SIO_000300: 1.054e1

DP
type: SiteQuality
SIO_000300: 5.74596e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.989149513323759e-5
allele num: 25068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3586
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ReadPosRankSum
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.12e-2

MQ
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SIO_000300: 5.82e1

BaseQRankSum
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SIO_000300: -1.67e0

FS
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SIO_000300: 5.756e0

VQSLOD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 8.952551477170994e-5
allele num: 22340
num of homozygotes: 0

DP
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SIO_000300: 5.58069e5

BaseQRankSum
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SIO_000300: 1.46e-1

InbreedingCoeff
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SIO_000300: -2.22e-2

QD
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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MQRankSum
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SIO_000300: -3.61e-1

FS
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SIO_000300: 4.741e0

ClippingRankSum
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SIO_000300: -3.61e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 1.128668171557562e-3
allele num: 2658
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -6.67e-1

MQRankSum
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ReadPosRankSum
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DP
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FS
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VQSLOD
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MQ
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QD
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ClippingRankSum
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SIO_000300: 4.24e-1

InbreedingCoeff
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SIO_000300: 2.04e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1420
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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South Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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allele frequency: 8.919202518363064e-3
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Other
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MQRankSum
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SIO_000300: -4.1e-2

ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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QD
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FS
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 9.420631182289213e-5
allele num: 21230
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 2.801120448179272e-4
allele num: 3570
num of homozygotes: 0

Other
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allele count: 1
allele frequency: 3.703703703703704e-3
allele num: 270
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 7.739938080495357e-4
allele num: 2584
num of homozygotes: 0

DP
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2584
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 2.086230876216968e-3
allele num: 2876
num of homozygotes: 0

FS
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SIO_000300: 5.22e-1

BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2570
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2862
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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FS
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SIO_000300: 0.0e0

DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.02e-2

ReadPosRankSum
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SIO_000300: -7.27e-1

MQ
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SIO_000300: 6.0e1

QD
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SIO_000300: 8.01e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 3478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1130
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 19442
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -5.72e-1

VQSLOD
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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num of homozygotes: 0

Other
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num of homozygotes: 0

FS
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1120
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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Other
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East Asian
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African
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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QD
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FS
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MQRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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East Asian
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African
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European (Non-Finnish)
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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FS
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QD
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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East Asian
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African
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allele num: 3404
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European (Finnish)
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Other
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 2.9708853238265e-4
allele num: 16830
num of homozygotes: 0

South Asian
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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East Asian
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VQSLOD
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DP
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 17008
num of homozygotes: 0

African
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Latino
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South Asian
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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South Asian
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Other
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FS
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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East Asian
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Latino
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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East Asian
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African
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QD
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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Other
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DP
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MQ
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MQRankSum
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FS
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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Latino
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South Asian
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MQ
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ReadPosRankSum
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QD
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FS
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 12612
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East Asian
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European (Finnish)
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Other
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African
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Latino
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South Asian
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MQ
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QD
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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Other
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Latino
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East Asian
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European (Finnish)
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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MQRankSum
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InbreedingCoeff
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DP
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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East Asian
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num of homozygotes: 0

European (Finnish)
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South Asian
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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DP
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MQRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 3.37609723160027e-4
allele num: 11848
num of homozygotes: 0

East Asian
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Latino
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allele num: 1294
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European (Finnish)
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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QD
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MQ
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

South Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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South Asian
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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Other
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VQSLOD
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.528057308545113e-5
allele num: 11726
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1284
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

FS
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InbreedingCoeff
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SIO_000300: -3.1e-2

QD
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DP
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SIO_000300: 4.84832e5

MQ
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ReadPosRankSum
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SIO_000300: 1.01e-1

VQSLOD
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SIO_000300: -3.572e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3320
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.99e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
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DP
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BaseQRankSum
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QD
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -5.73e-1

MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: -2.049e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2936
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.811594202898551e-3
allele num: 3312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11704
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.04e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.032e0

MQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

DP
type: SiteQuality
SIO_000300: 4.89778e5

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 117
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.428860418071477e-5
allele num: 11864
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 5.369e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.92e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

DP
type: SiteQuality
SIO_000300: 4.92723e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 79
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 14

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2926
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 5.274261603375527e-3
allele num: 1896
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.350033400133601e-5
allele num: 11976
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.25689404934688e-4
allele num: 1378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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FS
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SIO_000300: 1.751e0

VQSLOD
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SIO_000300: 1.87e0

ReadPosRankSum
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SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1422
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
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Other
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allele count: 0
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East Asian
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

InbreedingCoeff
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SIO_000300: -2.71e-2

VQSLOD
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QD
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ReadPosRankSum
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FS
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MQRankSum
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SIO_000300: 2.81e-1

ClippingRankSum
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SIO_000300: -5.12e-1

DP
type: SiteQuality
SIO_000300: 5.02292e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1428
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.753360607831677e-3
allele num: 3422
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South Asian
type: Population
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allele frequency: 6.775067750677507e-4
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East Asian
type: Population
allele count: 2
allele frequency: 9.930486593843098e-4
allele num: 2014
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.008970046452026e-5
allele num: 12486
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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FS
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DP
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 2168
num of homozygotes: 0

Latino
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European (Non-Finnish)
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Other
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African
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South Asian
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European (Finnish)
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FS
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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European (Non-Finnish)
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South Asian
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Other
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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FS
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MQ
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QD
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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European (Non-Finnish)
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Other
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East Asian
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allele num: 2360
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European (Finnish)
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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DP
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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FS
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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allele num: 13556
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Latino
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Other
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East Asian
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South Asian
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.496110113704369e-4
allele num: 13368
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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Latino
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South Asian
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African
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QD
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InbreedingCoeff
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DP
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 1.485663348685188e-4
allele num: 13462
num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.145475372279496e-3
allele num: 1746
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South Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 7.397544015386891e-5
allele num: 13518
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

African
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allele frequency: 2.828054298642534e-4
allele num: 3536
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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QD
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQ
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DP
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InbreedingCoeff
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SIO_000300: -2.29e-2

ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 3516
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Latino
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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DP
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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QD
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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African
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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FS
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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Other
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MQ
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FS
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 4.87203e5

FS
type: SiteQuality
SIO_000300: 1.034e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 5.27e0

VQSLOD
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SIO_000300: -2.197e0

ClippingRankSum
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.88e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3390
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2346
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12682
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -3.06e-2

MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -5.5e-1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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BaseQRankSum
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SIO_000300: -1.3e0

DP
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SIO_000300: 4.78137e5

MQRankSum
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SIO_000300: -5.5e-1

VQSLOD
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SIO_000300: -2.387e0

QD
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SIO_000300: 4.33e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1942
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1682
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12554
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.12e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
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FS
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SIO_000300: 4.771e0

DP
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SIO_000300: 4.68599e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.336e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.647989452867502e-4
allele num: 12136
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.45632798573975e-4
allele num: 2244
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.54402e5

VQSLOD
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SIO_000300: -1.23e0

MQRankSum
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SIO_000300: 2.78e-1

ReadPosRankSum
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SIO_000300: -6.78e-1

QD
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 4.178505766337958e-4
allele num: 11966
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

East Asian
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allele count: 62
allele frequency: 2.72887323943662e-2
allele num: 2272
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.045949214026602e-4
allele num: 1654
num of homozygotes: 0

Other
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allele count: 1
allele frequency: 6.41025641025641e-3
allele num: 156
num of homozygotes: 0

ClippingRankSum
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SIO_000300: 1.43e-1

BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQ
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FS
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1080
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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QD
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MQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: 1.38e0

InbreedingCoeff
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

African
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Other
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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MQRankSum
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DP
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FS
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2336
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 6.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.15e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.105e0

DP
type: SiteQuality
SIO_000300: 3.66752e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeDepth
all individuals: 52
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5043
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.589331952356292e-4
allele num: 7724
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.09e-2

FS
type: SiteQuality
SIO_000300: 2.908e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.783e0

DP
type: SiteQuality
SIO_000300: 2.88107e5

QD
type: SiteQuality
SIO_000300: 9.02e0

GenotypeDepth
all individuals: 77
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5511
bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.295336787564767e-4
allele num: 7720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.006e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.256e0

DP
type: SiteQuality
SIO_000300: 2.87037e5

QD
type: SiteQuality
SIO_000300: 1.853e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.103e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.57e-2

GenotypeDepth
all individuals: 41
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1387
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
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variant carriers: 0

GenotypeQuality
all individuals: 387
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GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.198856251624642e-4
allele num: 7694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.15e-2

DP
type: SiteQuality
SIO_000300: 2.84473e5

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.167e0

FS
type: SiteQuality
SIO_000300: 2.912e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.403e0

GenotypeDepth
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 151
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 508
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1182
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3588
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GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 456
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GenotypeQuality
all individuals: 69
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 380
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variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1772
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.300052002080083e-4
allele num: 7692
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.648e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.55e-1

FS
type: SiteQuality
SIO_000300: 5.59e0

QD
type: SiteQuality
SIO_000300: 1.412e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.06e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.84392e5

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1327
bin: 9.75e1
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GenotypeQuality
all individuals: 139
bin: 2.75e1
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GenotypeQuality
all individuals: 1071
bin: 6.75e1
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GenotypeQuality
all individuals: 444
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7682
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 6.211180124223602e-3
allele num: 322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6670
num of homozygotes: 0