11-5664113-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664113
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664113
    reference: chr 11
allele count: 1
allele frequency: 8.463100880162492e-6
allele num: 118160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.901+40A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.901+40A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1963+40A>G
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.185+30A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2802T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.901+40A>G
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5942
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5482
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4476
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5643
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

11-5664123-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664123
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664123
    reference: chr 11
allele count: 1
allele frequency: 8.535190590805893e-6
allele num: 117162
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.901+50A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.901+50A>G
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2792T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.901+50A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1963+50A>G
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.185+40A>G
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5757
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4416
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5939
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4044
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-5664340-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664340
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664340
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 612
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-34T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2575A>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-34T>C
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-34T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-34T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-34T>C
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-5664342-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664342
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664342
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 622
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-32T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-32T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-32T>C
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-32T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2573A>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-32T>C
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

11-5664344-C-CAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664344
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664346
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 1500
alternate allele: CAT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-19_902-18dupAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-19_186-18dupAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-19_902-18dupAT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-19_902-18dupAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-19_1964-18dupAT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2569_-1137+2570dupAT
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ

11-5664344-C-CATAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664344
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664348
    reference: chr 11
allele count: 3
allele frequency: 2.0e-3
allele num: 1500
alternate allele: CATAT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-21_902-18dupATAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-21_902-18dupATAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2567_-1137+2570dupATAT
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-21_902-18dupATAT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-21_186-18dupATAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-21_1964-18dupATAT
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.5e0
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 23
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

11-5664344-C-CATATAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664344
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664350
    reference: chr 11
allele count: 67
allele frequency: 4.466666666666667e-2
allele num: 1500
alternate allele: CATATAT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-23_186-18dupATATAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-23_902-18dupATATAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-23_1964-18dupATATAT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-23_902-18dupATATAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-23_902-18dupATATAT
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.5e0
  variant carriers: 284
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 1.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.5e0
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 12
num of homozygotes: 2
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-5664344-C-CATATATAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664344
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664352
    reference: chr 11
allele count: 6
allele frequency: 4.0e-3
allele num: 1500
alternate allele: CATATATAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.5e0
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

11-5664344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664344
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664344
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 1500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-30C>T
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-30C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2571G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-30C>T
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-30C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-30C>T
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

11-5664346-T-TAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664346
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664348
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 706
alternate allele: TAC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-27_1964-26insCA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-27_186-26insCA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-27_902-26insCA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2568_-1137+2569insGT
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-27_902-26insCA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-27_902-26insCA
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

11-5664353-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664353
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664354
    reference: chr 11
allele count: 2
allele frequency: 1.776198934280639e-3
allele num: 1126
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-20dupT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-20dupT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-20dupT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-20dupT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2561dupA
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-20dupT
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6036
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-5664354-T-TAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664354
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 1358
alternate allele: TAG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2560_-1137+2561insCT
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-19_902-18insGA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-19_902-18insGA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-19_902-18insGA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-19_186-18insGA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-19_1964-18insGA
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6300
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

11-5664354-T-TATATAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664354
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664360
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 1358
alternate allele: TATATAG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATAGAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATAGAT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATAGAT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATAGAT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATAGAT
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6300
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-5664354-T-TATATATAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664354
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664362
    reference: chr 11
allele count: 1
allele frequency: 7.363770250368188e-4
allele num: 1358
alternate allele: TATATATAG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.5e0
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 2.5e0
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 6300
  bin: 7.5e0
  variant carriers: 29
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

11-5664354-T-TATATATATAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664354
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664364
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 1358
alternate allele: TATATATATAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6300
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

11-5664355-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664355
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
allele count: 132
allele frequency: 3.758542141230068e-2
allele num: 3512
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-8dupT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-8dupT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-8dupT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-8dupT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-8dupT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2559dupA
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 7.5e0
  variant carriers: 552
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21533
  bin: 2.5e0
  variant carriers: 628
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 1.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 6.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 7.5e0
  variant carriers: 312
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 6.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 2.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 5677
  bin: 2.5e0
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 9.75e1
  variant carriers: 85
num of homozygotes: 3
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-5664355-A-ATATAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664355
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664360
    reference: chr 11
allele count: 84
allele frequency: 2.391799544419134e-2
allele num: 3512
alternate allele: ATATAT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATATT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATATT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2559_-1137+2560insATATA
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATATT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATATT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATATT
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 7.5e0
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21533
  bin: 2.5e0
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 6890
  bin: 1.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 1.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 5677
  bin: 2.5e0
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 2
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

11-5664355-A-ATATATTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664355
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664362
    reference: chr 11
allele count: 55
allele frequency: 1.566059225512529e-2
allele num: 3512
alternate allele: ATATATTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATATTTT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATATTTT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATATTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATATTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATATTTT
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 7.5e0
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 21533
  bin: 2.5e0
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6890
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 7.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 9.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 2
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-5664355-A-ATTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664355
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664358
    reference: chr 11
allele count: 42
allele frequency: 1.195899772209567e-2
allele num: 3512
alternate allele: ATTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-10_902-8dupTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2557_-1137+2559dupAAA
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-10_902-8dupTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-10_186-8dupTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-10_1964-8dupTTT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-10_902-8dupTTT
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 7.5e0
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 21533
  bin: 2.5e0
  variant carriers: 276
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 1.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 5677
  bin: 2.5e0
  variant carriers: 380
genotype quality: GenotypeQuality
  all individuals: 6890
  bin: 1.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 7.5e0
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 7
num of homozygotes: 1
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

11-5664355-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664355
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664354
    reference: chr 11
allele count: 765
allele frequency: 2.178246013667426e-1
allele num: 3512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-8delT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-8delT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-8delT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2559delA
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-8delT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-8delT
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21533
  bin: 2.5e0
  variant carriers: 12779
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 512
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 7.5e0
  variant carriers: 4554
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 6.25e1
  variant carriers: 211
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 7.5e0
  variant carriers: 5488
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 1.75e1
  variant carriers: 3183
genotype quality: GenotypeQuality
  all individuals: 6890
  bin: 1.25e1
  variant carriers: 5012
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 2.25e1
  variant carriers: 895
genotype quality: GenotypeQuality
  all individuals: 5677
  bin: 2.5e0
  variant carriers: 1596
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 130
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.75e1
  variant carriers: 471
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.75e1
  variant carriers: 328
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.75e1
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 289
num of homozygotes: 159
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: AT
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

11-5664355-ATTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664355
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664352
    reference: chr 11
allele count: 84
allele frequency: 2.391799544419134e-2
allele num: 3512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-10_902-8delTTT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-10_1964-8delTTT
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-10_902-8delTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-10_186-8delTTT
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2557_-1137+2559delAAA
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-10_902-8delTTT
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 7.5e0
  variant carriers: 326
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21533
  bin: 2.5e0
  variant carriers: 283
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5677
  bin: 2.5e0
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 6.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 6.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 1.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 7.5e0
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 2.25e1
  variant carriers: 23
num of homozygotes: 4
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: ATTT
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-5664356-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664357
    reference: chr 11
allele count: 144
allele frequency: 6.255430060816682e-2
allele num: 2302
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2558_-1137+2559insT
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insA
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 7.5e0
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.5e0
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 7.5e0
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 5627
  bin: 2.5e0
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 6.75e1
  variant carriers: 5
num of homozygotes: 6
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

11-5664356-T-TATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664359
    reference: chr 11
allele count: 18
allele frequency: 7.819287576020852e-3
allele num: 2302
alternate allele: TATA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2558_-1137+2559insTAT
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATA
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 7.5e0
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.5e0
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 5627
  bin: 2.5e0
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 1.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 7.5e0
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 12
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: T
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

11-5664356-T-TATATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664361
    reference: chr 11
allele count: 460
allele frequency: 1.998262380538662e-1
allele num: 2302
alternate allele: TATATA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2558_-1137+2559insTATAT
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATATA
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 7.5e0
  variant carriers: 951
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.5e0
  variant carriers: 2177
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 6.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 178
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 9.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 1.75e1
  variant carriers: 257
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 351
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 56
num of homozygotes: 30
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

11-5664356-T-TATATAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664363
    reference: chr 11
allele count: 239
allele frequency: 1.038227628149435e-1
allele num: 2302
alternate allele: TATATAGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATATAGA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATATAGA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATATAGA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATATAGA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATATAGA
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 7.5e0
  variant carriers: 477
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.5e0
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 1.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 5627
  bin: 2.5e0
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 7.5e0
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.25e1
  variant carriers: 34
num of homozygotes: 6
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

11-5664356-T-TATATATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664363
    reference: chr 11
allele count: 575
allele frequency: 2.497827975673328e-1
allele num: 2302
alternate allele: TATATATA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-18_902-17insATATATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-18_902-17insATATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-18_186-17insATATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-18_902-17insATATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-18_1964-17insATATATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.5e0
  variant carriers: 2195
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 7.5e0
  variant carriers: 875
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 5627
  bin: 2.5e0
  variant carriers: 1194
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 1.75e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 311
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 79
num of homozygotes: 63
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-5664356-T-TATATATATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664365
    reference: chr 11
allele count: 11
allele frequency: 4.77845351867941e-3
allele num: 2302
alternate allele: TATATATATA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.5e0
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3329
  bin: 7.5e0
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5627
  bin: 2.5e0
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

11-5664357-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664357
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664357
    reference: chr 11
allele count: 4
allele frequency: 3.669724770642202e-3
allele num: 1090
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2558A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-17T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-17T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-17T>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-17T>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-17T>A
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 2.5e0
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.5e0
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 7.5e0
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 1.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 1.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4631
  bin: 2.5e0
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

11-5664357-T-TATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664357
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664360
    reference: chr 11
allele count: 2
allele frequency: 1.834862385321101e-3
allele num: 1090
alternate allele: TATA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-17_902-16insATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-17_1964-16insATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-17_902-16insATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-17_186-16insATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-17_902-16insATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2557_-1137+2558insTAT
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4631
  bin: 2.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

11-5664357-T-TATATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664357
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664362
    reference: chr 11
allele count: 21
allele frequency: 1.926605504587156e-2
allele num: 1090
alternate allele: TATATA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-17_902-16insATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-17_902-16insATATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-17_186-16insATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-17_1964-16insATATA
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-17_902-16insATATA
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2557_-1137+2558insTATAT
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4631
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 9.75e1
  variant carriers: 10
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

11-5664358-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664358
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664358
    reference: chr 11
allele count: 75
allele frequency: 7.370283018867925e-3
allele num: 10176
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2557A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-16T>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-16T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-16T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-16T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-16T>A
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 24305
  bin: 2.5e0
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 16699
  bin: 7.5e0
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18609
  bin: 7.5e0
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 9.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7434
  bin: 1.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 2.5e0
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 9243
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4525
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 2.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 4
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

11-5664359-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664359
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664359
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 10724
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-15T>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-15T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-15T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-15T>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2556A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-15T>A
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18789
  bin: 7.5e0
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27326
  bin: 2.5e0
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1885
  bin: 2.5e0
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20856
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8142
  bin: 1.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 3.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-5664361-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664361
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664361
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 11784
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-13T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-13T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-13T>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-13T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2554A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-13T>A
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20002
  bin: 7.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29192
  bin: 2.5e0
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 3.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 2.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6130
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 23505
  bin: 7.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.25e1
  variant carriers: 2
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-5664366-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664366
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664366
    reference: chr 11
allele count: 4
allele frequency: 2.319109461966605e-4
allele num: 17248
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-8T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-8T>C
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-8T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-8T>C
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-8T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2549A>G
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18016
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33012
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30084
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16745
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1964-8T>C
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-5664366-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664366
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664367
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 17248
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-7dupC
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-7dupC
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-7dupC
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2548dupG
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-7dupC
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-7dupC
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 33012
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18016
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1964-7dupC
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

11-5664367-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664367
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664367
    reference: chr 11
allele count: 11
allele frequency: 6.473634651600754e-4
allele num: 16992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-7C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-7C>T
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-7C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-7C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-7C>T
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2548G>A
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35385
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1763
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2782
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3585
  bin: 2.5e0
  variant carriers: 2
hgvs: c.1964-7C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

11-5664371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664371
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664371
    reference: chr 11
allele count: 2
allele frequency: 7.185972980741592e-5
allele num: 27832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-3C>T
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2544G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-3C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-3C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-3C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-3C>T
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1964-3C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-5664372-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664372
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664372
    reference: chr 11
allele count: 1
allele frequency: 3.22061191626409e-5
allele num: 31050
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-2A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-2A>G
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2543T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-2A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-2A>G
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-2A>G
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8111
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37097
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6721
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5185
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1964-2A>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-5664373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664373
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664373
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 33330
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.902-1G>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.902-1G>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1964-1G>A
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.186-1G>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.902-1G>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2542C>T
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: splice acceptor
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37062
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1964-1G>A
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

11-5664378-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664378
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664378
    reference: chr 11
allele count: 1
allele frequency: 2.319001901581559e-5
allele num: 43122
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1968T>A
  hgvsp: ENSP00000346916.5:p.Asp656Glu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2537A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.906T>A
  hgvsp: ENSP00000395982.2:p.Asp302Glu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.906T>A
  hgvsp: ENSP00000422947.1:p.Asp302Glu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.190T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.906T>A
  hgvsp: ENSP00000402595.2:p.Asp302Glu
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34764
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11172
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp656Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-5664381-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664381
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664381
    reference: chr 11
allele count: 1
allele frequency: 2.114075514777388e-5
allele num: 47302
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2534G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.909C>T
  hgvsp: ENST00000457787.2:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.193C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1971C>T
  hgvsp: ENST00000354852.5:c.1971C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.909C>T
  hgvsp: ENST00000514226.1:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.909C>T
  hgvsp: ENST00000429814.2:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val657Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-5664388-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664388
    reference: chr 11
allele count: 2
allele frequency: 3.281916639317361e-5
allele num: 60940
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.916A>T
  hgvsp: ENSP00000395982.2:p.Asn306Tyr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.200A>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.916A>T
  hgvsp: ENSP00000422947.1:p.Asn306Tyr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.916A>T
  hgvsp: ENSP00000402595.2:p.Asn306Tyr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1978A>T
  hgvsp: ENSP00000346916.5:p.Asn660Tyr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2527T>A
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28030
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2908
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn660Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

11-5664395-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664395
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664395
    reference: chr 11
allele count: 1
allele frequency: 1.388348975398456e-5
allele num: 72028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.923T>A
  hgvsp: ENSP00000402595.2:p.Val308Asp
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.923T>A
  hgvsp: ENSP00000395982.2:p.Val308Asp
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.207T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.923T>A
  hgvsp: ENSP00000422947.1:p.Val308Asp
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2520A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1985T>A
  hgvsp: ENSP00000346916.5:p.Val662Asp
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val662Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-5664396-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664396
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664396
    reference: chr 11
allele count: 1
allele frequency: 1.354683139613644e-5
allele num: 73818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.924C>A
  hgvsp: ENST00000429814.2:c.924C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.1986C>A
  hgvsp: ENST00000354852.5:c.1986C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.924C>A
  hgvsp: ENST00000514226.1:c.924C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2519G>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.208C>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.924C>A
  hgvsp: ENST00000457787.2:c.924C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24084
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1818
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val662Val
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-5664411-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664411
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664411
    reference: chr 11
allele count: 2
allele frequency: 2.107259509008534e-5
allele num: 94910
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.939T>C
  hgvsp: ENST00000514226.1:c.939T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.939T>C
  hgvsp: ENST00000429814.2:c.939T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2001T>C
  hgvsp: ENST00000354852.5:c.2001T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.223T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.939T>C
  hgvsp: ENST00000457787.2:c.939T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2504A>G
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33891
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4307
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12742
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn667Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-5664422-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664422
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664422
    reference: chr 11
allele count: 1
allele frequency: 9.542348944616206e-6
allele num: 104796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.950C>T
  hgvsp: ENSP00000395982.2:p.Ser317Leu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.950C>T
  hgvsp: ENSP00000422947.1:p.Ser317Leu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.950C>T
  hgvsp: ENSP00000402595.2:p.Ser317Leu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2493G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2012C>T
  hgvsp: ENSP00000346916.5:p.Ser671Leu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.234C>T
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8094
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser671Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

11-5664426-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664426
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664426
    reference: chr 11
allele count: 2
allele frequency: 1.858148912053812e-5
allele num: 107634
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.954A>T
  hgvsp: ENSP00000422947.1:p.Glu318Asp
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2016A>T
  hgvsp: ENSP00000346916.5:p.Glu672Asp
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.238A>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.954A>T
  hgvsp: ENSP00000395982.2:p.Glu318Asp
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2489T>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.954A>T
  hgvsp: ENSP00000402595.2:p.Glu318Asp
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42798
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39994
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu672Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

11-5664432-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664432
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664432
    reference: chr 11
allele count: 1
allele frequency: 9.110123168865243e-6
allele num: 109768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.960G>C
  hgvsp: ENSP00000395982.2:p.Gln320His
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.960G>C
  hgvsp: ENSP00000422947.1:p.Gln320His
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2483C>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.244G>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2022G>C
  hgvsp: ENSP00000346916.5:p.Gln674His
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.960G>C
  hgvsp: ENSP00000402595.2:p.Gln320His
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5845
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln674His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

11-5664443-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664443
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664443
    reference: chr 11
allele count: 1
allele frequency: 8.913291500285225e-6
allele num: 112192
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2472A>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.971T>C
  hgvsp: ENSP00000395982.2:p.Ile324Thr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.255T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.971T>C
  hgvsp: ENSP00000402595.2:p.Ile324Thr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.971T>C
  hgvsp: ENSP00000422947.1:p.Ile324Thr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2033T>C
  hgvsp: ENSP00000346916.5:p.Ile678Thr
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5554
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile678Thr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-5664448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664448
    reference: chr 11
allele count: 1
allele frequency: 8.823944656219117e-6
allele num: 113328
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2038G>A
  hgvsp: ENSP00000346916.5:p.Val680Met
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.260G>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2467C>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.976G>A
  hgvsp: ENSP00000402595.2:p.Val326Met
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.976G>A
  hgvsp: ENSP00000422947.1:p.Val326Met
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.976G>A
  hgvsp: ENSP00000395982.2:p.Val326Met
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37823
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val680Met
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-5664459-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664459
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664459
    reference: chr 11
allele count: 1
allele frequency: 8.560178051703475e-6
allele num: 116820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.271G>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2049G>C
  hgvsp: ENSP00000346916.5:p.Trp683Cys
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.987G>C
  hgvsp: ENSP00000422947.1:p.Trp329Cys
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.987G>C
  hgvsp: ENSP00000395982.2:p.Trp329Cys
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2456C>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.987G>C
  hgvsp: ENSP00000402595.2:p.Trp329Cys
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2265
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Trp683Cys
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/11-5664460-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664460
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664460
    reference: chr 11
allele count: 12
allele frequency: 1.024870183110139e-4
allele num: 117088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.988C>A
  hgvsp: ENSP00000395982.2:p.Pro330Thr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2050C>A
  hgvsp: ENSP00000346916.5:p.Pro684Thr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.988C>A
  hgvsp: ENSP00000422947.1:p.Pro330Thr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.988C>A
  hgvsp: ENSP00000402595.2:p.Pro330Thr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.272C>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2455G>T
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42627
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9860
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6477
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2128
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro684Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

11-5664462-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664462
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664462
    reference: chr 11
allele count: 1
allele frequency: 8.501232678738417e-6
allele num: 117630
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2453A>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.990T>C
  hgvsp: ENST00000514226.1:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2052T>C
  hgvsp: ENST00000354852.5:c.2052T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.990T>C
  hgvsp: ENST00000457787.2:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.274T>C
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.990T>C
  hgvsp: ENST00000429814.2:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41369
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6607
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro684Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-5664466-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664466
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664466
    reference: chr 11
allele count: 1
allele frequency: 8.446373971653969e-6
allele num: 118394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.994C>G
  hgvsp: ENSP00000402595.2:p.Gln332Glu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.994C>G
  hgvsp: ENSP00000395982.2:p.Gln332Glu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2449G>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.994C>G
  hgvsp: ENSP00000422947.1:p.Gln332Glu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.278C>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2056C>G
  hgvsp: ENSP00000346916.5:p.Gln686Glu
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6730
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln686Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-5664467-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664467
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664467
    reference: chr 11
allele count: 2
allele frequency: 1.686454398273071e-5
allele num: 118592
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.995A>G
  hgvsp: ENSP00000422947.1:p.Gln332Arg
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2057A>G
  hgvsp: ENSP00000346916.5:p.Gln686Arg
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.995A>G
  hgvsp: ENSP00000395982.2:p.Gln332Arg
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2448T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.995A>G
  hgvsp: ENSP00000402595.2:p.Gln332Arg
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.279A>G
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10377
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln686Arg
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

11-5664482-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664482
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664482
    reference: chr 11
allele count: 2
allele frequency: 1.663506005256679e-5
allele num: 120228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.294G>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2072G>T
  hgvsp: ENSP00000346916.5:p.Gly691Val
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1010G>T
  hgvsp: ENSP00000395982.2:p.Gly337Val
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1010G>T
  hgvsp: ENSP00000402595.2:p.Gly337Val
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1010G>T
  hgvsp: ENSP00000422947.1:p.Gly337Val
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2433C>A
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly691Val
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

11-5664498-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664498
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664498
    reference: chr 11
allele count: 1
allele frequency: 8.267195767195768e-6
allele num: 120960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1026A>G
  hgvsp: ENST00000429814.2:c.1026A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.310A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1026A>G
  hgvsp: ENST00000514226.1:c.1026A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2088A>G
  hgvsp: ENST00000354852.5:c.2088A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1026A>G
  hgvsp: ENST00000457787.2:c.1026A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2417T>C
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7370
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42961
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln696Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-5664503-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664503
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664503
    reference: chr 11
allele count: 3
allele frequency: 2.478478544637399e-5
allele num: 121042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.315T>A
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1031T>A
  hgvsp: ENSP00000422947.1:p.Phe344Tyr
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2093T>A
  hgvsp: ENSP00000346916.5:p.Phe698Tyr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1031T>A
  hgvsp: ENSP00000395982.2:p.Phe344Tyr
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2412A>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1031T>A
  hgvsp: ENSP00000402595.2:p.Phe344Tyr
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43103
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42994
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe698Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

11-5664506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664506
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664506
    reference: chr 11
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2096C>T
  hgvsp: ENSP00000346916.5:p.Ser699Phe
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1034C>T
  hgvsp: ENSP00000395982.2:p.Ser345Phe
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2409G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1034C>T
  hgvsp: ENSP00000402595.2:p.Ser345Phe
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1034C>T
  hgvsp: ENSP00000422947.1:p.Ser345Phe
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.318C>T
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7383
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser699Phe
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

11-5664515-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664515
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664515
    reference: chr 11
allele count: 27
allele frequency: 2.227722772277228e-4
allele num: 121200
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2105A>G
  hgvsp: ENSP00000346916.5:p.Lys702Arg
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1043A>G
  hgvsp: ENSP00000422947.1:p.Lys348Arg
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2400T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1043A>G
  hgvsp: ENSP00000395982.2:p.Lys348Arg
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.327A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1043A>G
  hgvsp: ENSP00000402595.2:p.Lys348Arg
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11591
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42958
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42961
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys702Arg
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

11-5664516-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664516
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664516
    reference: chr 11
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2106A>G
  hgvsp: ENST00000354852.5:c.2106A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1044A>G
  hgvsp: ENST00000429814.2:c.1044A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1044A>G
  hgvsp: ENST00000514226.1:c.1044A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2399T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.328A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1044A>G
  hgvsp: ENST00000457787.2:c.1044A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys702Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

11-5664526-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664526
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664526
    reference: chr 11
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1054G>A
  hgvsp: ENSP00000402595.2:p.Glu352Lys
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1054G>A
  hgvsp: ENSP00000422947.1:p.Glu352Lys
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2389C>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1054G>A
  hgvsp: ENSP00000395982.2:p.Glu352Lys
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2116G>A
  hgvsp: ENSP00000346916.5:p.Glu706Lys
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.338G>A
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42849
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu706Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

11-5664534-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664534
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664534
    reference: chr 11
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1062C>T
  hgvsp: ENST00000514226.1:c.1062C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2381G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.346C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2124C>T
  hgvsp: ENST00000354852.5:c.2124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1062C>T
  hgvsp: ENST00000457787.2:c.1062C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1062C>T
  hgvsp: ENST00000429814.2:c.1062C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7400
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp708Asp
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

11-5664535-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664535
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664535
    reference: chr 11
allele count: 3
allele frequency: 2.474267616785431e-5
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2380C>T
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1063G>A
  hgvsp: ENSP00000402595.2:p.Val355Met
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1063G>A
  hgvsp: ENSP00000395982.2:p.Val355Met
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1063G>A
  hgvsp: ENSP00000422947.1:p.Val355Met
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2125G>A
  hgvsp: ENSP00000346916.5:p.Val709Met
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.347G>A
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val709Met
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-5664541-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664541
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664541
    reference: chr 11
allele count: 2
allele frequency: 1.649212501030758e-5
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2374T>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1069A>C
  hgvsp: ENSP00000395982.2:p.Lys357Gln
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2131A>C
  hgvsp: ENSP00000346916.5:p.Lys711Gln
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1069A>C
  hgvsp: ENSP00000422947.1:p.Lys357Gln
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1069A>C
  hgvsp: ENSP00000402595.2:p.Lys357Gln
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.353A>C
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42589
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys711Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

11-5664542-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664542
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664542
    reference: chr 11
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2132A>G
  hgvsp: ENSP00000346916.5:p.Lys711Arg
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1070A>G
  hgvsp: ENSP00000402595.2:p.Lys357Arg
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1070A>G
  hgvsp: ENSP00000395982.2:p.Lys357Arg
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2373T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1070A>G
  hgvsp: ENSP00000422947.1:p.Lys357Arg
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.354A>G
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42567
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys711Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

11-5664552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664552
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664552
    reference: chr 11
allele count: 2
allele frequency: 1.649130908011478e-5
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.364C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1080C>T
  hgvsp: ENST00000429814.2:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2363G>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1080C>T
  hgvsp: ENST00000457787.2:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1080C>T
  hgvsp: ENST00000514226.1:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2142C>T
  hgvsp: ENST00000354852.5:c.2142C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42162
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala714Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-5664559-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664559
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664559
    reference: chr 11
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1087C>T
  hgvsp: ENST00000457787.2:c.1087C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2149C>T
  hgvsp: ENST00000354852.5:c.2149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1087C>T
  hgvsp: ENST00000514226.1:c.1087C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.371C>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1087C>T
  hgvsp: ENST00000429814.2:c.1087C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2356G>A
  variant of: http://identifiers.org/hgnc/4832
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu717Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-5664563-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664563
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664563
    reference: chr 11
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2153G>C
  hgvsp: ENSP00000346916.5:p.Gly718Ala
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2352C>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1091G>C
  hgvsp: ENSP00000422947.1:p.Gly364Ala
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1091G>C
  hgvsp: ENSP00000402595.2:p.Gly364Ala
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1091G>C
  hgvsp: ENSP00000395982.2:p.Gly364Ala
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.375G>C
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7412
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42036
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly718Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-5664564-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664564
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664564
    reference: chr 11
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1092G>T
  hgvsp: ENST00000429814.2:c.1092G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2351C>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1092G>T
  hgvsp: ENST00000457787.2:c.1092G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1092G>T
  hgvsp: ENST00000514226.1:c.1092G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.376G>T
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2154G>T
  hgvsp: ENST00000354852.5:c.2154G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly718Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

11-5664565-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664565
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664565
    reference: chr 11
allele count: 2
allele frequency: 1.649375711293276e-5
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1093G>T
  hgvsp: ENSP00000422947.1:p.Val365Leu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2155G>T
  hgvsp: ENSP00000346916.5:p.Val719Leu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2350C>A
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1093G>T
  hgvsp: ENSP00000395982.2:p.Val365Leu
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1093G>T
  hgvsp: ENSP00000402595.2:p.Val365Leu
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.377G>T
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7397
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val719Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

11-5664568-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664568
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664568
    reference: chr 11
allele count: 4
allele frequency: 3.298479400996141e-5
allele num: 121268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1096T>C
  hgvsp: ENSP00000395982.2:p.Tyr366His
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2347A>G
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1096T>C
  hgvsp: ENSP00000402595.2:p.Tyr366His
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1096T>C
  hgvsp: ENSP00000422947.1:p.Tyr366His
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2158T>C
  hgvsp: ENSP00000346916.5:p.Tyr720His
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.380T>C
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42191
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11649
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr720His
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

11-5664569-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5664569
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 5664569
    reference: chr 11
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000422947
  ensembl transcript: ENST00000514226
  gene symbol: TRIM34
  hgvsc: ENST00000514226.1:c.1097A>G
  hgvsp: ENSP00000422947.1:p.Tyr366Cys
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000258659
  ensembl transcript: ENST00000495668
  gene symbol: TRIM34
  hgvsc: ENST00000495668.1:n.381A>G
  variant of: http://identifiers.org/hgnc/10063
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000395982
  ensembl transcript: ENST00000457787
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000457787.2:c.1097A>G
  hgvsp: ENSP00000395982.2:p.Tyr366Cys
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000258588
  ensembl protein: ENSP00000346916
  ensembl transcript: ENST00000354852
  gene symbol: TRIM6-TRIM34
  hgvsc: ENST00000354852.5:c.2159A>G
  hgvsp: ENSP00000346916.5:p.Tyr720Cys
  variant of: http://identifiers.org/hgnc/33440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196565
  ensembl protein: ENSP00000369609
  ensembl transcript: ENST00000380259
  gene symbol: HBG2
  hgvsc: ENST00000380259.2:c.-1137+2346T>C
  variant of: http://identifiers.org/hgnc/4832
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000258659
  ensembl protein: ENSP00000402595
  ensembl transcript: ENST00000429814
  gene symbol: TRIM34
  hgvsc: ENST00000429814.2:c.1097A>G
  hgvsp: ENSP00000402595.2:p.Tyr366Cys
  variant of: http://identifiers.org/hgnc/10063
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr720Cys
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2767
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545069682642687e-5
allele num: 64722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

DP
type: SiteQuality
SIO_000300: 1.641636e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.281e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.241e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.041e-1

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2825
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.954154727793696e-5
allele num: 11168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15988
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.946e0

DP
type: SiteQuality
SIO_000300: 1.609086e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.245e0

QD
type: SiteQuality
SIO_000300: 1.261e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2079
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 7.9035e4

VQSLOD
type: SiteQuality
SIO_000300: -2.587e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 6.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.78e-2

MQ
type: SiteQuality
SIO_000300: 2.9e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeQuality
all individuals: 20
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.647e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.470000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

DP
type: SiteQuality
SIO_000300: 7.9868e4

MQ
type: SiteQuality
SIO_000300: 4.331e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
all individuals: 665
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 98
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 7.8276e4

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.248e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

FS
type: SiteQuality
SIO_000300: 2.295e0

QD
type: SiteQuality
SIO_000300: 5.47e0

MQ
type: SiteQuality
SIO_000300: 4.684e1

GenotypeQuality
all individuals: 67
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 541
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 216
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 98
bin: 6.25e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.439024390243903e-2
allele num: 82
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.666666666666667e-3
allele num: 600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.248e-1

FS
type: SiteQuality
SIO_000300: 2.295e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

QD
type: SiteQuality
SIO_000300: 5.47e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 4.684e1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 7.8276e4

GenotypeQuality
all individuals: 216
bin: 3.75e1
variant carriers: 17

GenotypeQuality
all individuals: 305
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 282
bin: 9.75e1
variant carriers: 56

GenotypeQuality
all individuals: 68
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 11

GenotypeQuality
all individuals: 43
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.405405405405406e-2
allele num: 148
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 5.2e-2
allele num: 500
num of homozygotes: 1

Latino
type: Population
allele count: 16
allele frequency: 1.509433962264151e-1
allele num: 106
num of homozygotes: 1

East Asian
type: Population
allele count: 14
allele frequency: 1.707317073170732e-1
allele num: 82
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.0e-3
allele num: 600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 2.295e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.248e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 4.684e1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

QD
type: SiteQuality
SIO_000300: 5.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

DP
type: SiteQuality
SIO_000300: 7.8276e4

GenotypeQuality
all individuals: 2462
bin: 7.5e0
variant carriers: 35

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.351351351351351e-2
allele num: 148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.0e-3
allele num: 600
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.0e-1
allele num: 10
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.684e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 2.295e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.248e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

QD
type: SiteQuality
SIO_000300: 5.47e0

DP
type: SiteQuality
SIO_000300: 7.8276e4

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

GenotypeQuality
all individuals: 98
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

MQ
type: SiteQuality
SIO_000300: 4.684e1

FS
type: SiteQuality
SIO_000300: 2.295e0

QD
type: SiteQuality
SIO_000300: 5.47e0

DP
type: SiteQuality
SIO_000300: 7.8276e4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.248e-1

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.35e-1

MQ
type: SiteQuality
SIO_000300: 5.177e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.49e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

QD
type: SiteQuality
SIO_000300: 3.242e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 8.9928e4

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 4.464285714285714e-3
allele num: 448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 1.06893e5

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.73e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.33e-1

QD
type: SiteQuality
SIO_000300: 8.359999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.934e-1

DP
type: SiteQuality
SIO_000300: 1.15788e5

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 5.534e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.177e1

QD
type: SiteQuality
SIO_000300: 5.73e0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.177e1

QD
type: SiteQuality
SIO_000300: 5.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.934e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 5.534e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 1.15788e5

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 750
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 35
bin: 6.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.953125e-3
allele num: 512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 5.534e0

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.934e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 5.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 1.15788e5

MQ
type: SiteQuality
SIO_000300: 5.177e1

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.177e1

QD
type: SiteQuality
SIO_000300: 5.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 5.534e0

DP
type: SiteQuality
SIO_000300: 1.15788e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.934e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 6890
bin: 1.25e1
variant carriers: 151

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 38

GenotypeQuality
all individuals: 802
bin: 2.75e1
variant carriers: 34

GenotypeQuality
all individuals: 497
bin: 3.75e1
variant carriers: 34

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 40

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 11

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 18

Latino
type: Population
allele count: 1
allele frequency: 6.329113924050633e-3
allele num: 158
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.333333333333333e-2
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 50
allele frequency: 6.053268765133172e-2
allele num: 826
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 3
allele frequency: 1.829268292682927e-2
allele num: 164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 69
allele frequency: 3.872053872053872e-2
allele num: 1782
num of homozygotes: 2

East Asian
type: Population
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 1.923076923076923e-2
allele num: 364
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.696e-1

FS
type: SiteQuality
SIO_000300: 3.271e0

QD
type: SiteQuality
SIO_000300: 2.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 1.71739e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 10554
bin: 7.5e0
variant carriers: 60

GenotypeQuality
all individuals: 1650
bin: 2.25e1
variant carriers: 15

GenotypeQuality
all individuals: 598
bin: 9.75e1
variant carriers: 51

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 188
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 170
bin: 7.75e1
variant carriers: 9

South Asian
type: Population
allele count: 9
allele frequency: 2.472527472527472e-2
allele num: 364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 5.487804878048781e-2
allele num: 164
num of homozygotes: 1

African
type: Population
allele count: 18
allele frequency: 2.179176755447942e-2
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.595744680851064e-2
allele num: 188
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 3.79746835443038e-2
allele num: 158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 39
allele frequency: 2.188552188552189e-2
allele num: 1782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.71739e5

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 2.304e1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.696e-1

FS
type: SiteQuality
SIO_000300: 3.271e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 5677
bin: 2.5e0
variant carriers: 72

GenotypeQuality
all individuals: 4364
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 170
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 101
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 299
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1650
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 7

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 2.02020202020202e-2
allele num: 1782
num of homozygotes: 1

African
type: Population
allele count: 5
allele frequency: 6.053268765133172e-3
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 4.878048780487805e-2
allele num: 164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.747252747252747e-3
allele num: 364
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 3.164556962025317e-2
allele num: 158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.271e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 2.304e1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

DP
type: SiteQuality
SIO_000300: 1.71739e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.696e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 18

GenotypeQuality
all individuals: 802
bin: 2.75e1
variant carriers: 13

GenotypeQuality
all individuals: 489
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 598
bin: 9.75e1
variant carriers: 64

GenotypeQuality
all individuals: 1650
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 497
bin: 3.75e1
variant carriers: 8

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 2.07631874298541e-2
allele num: 1782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.747252747252747e-3
allele num: 364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.097560975609756e-3
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.631961259079903e-3
allele num: 826
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

QD
type: SiteQuality
SIO_000300: 2.304e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.696e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.271e0

DP
type: SiteQuality
SIO_000300: 1.71739e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 598
bin: 9.75e1
variant carriers: 325

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 69

GenotypeQuality
all individuals: 188
bin: 6.75e1
variant carriers: 117

GenotypeQuality
all individuals: 101
bin: 7.25e1
variant carriers: 52

GenotypeQuality
all individuals: 536
bin: 4.25e1
variant carriers: 366

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 105

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 127

Other
type: Population
allele count: 8
allele frequency: 2.666666666666667e-1
allele num: 30
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 469
allele frequency: 2.631874298540965e-1
allele num: 1782
num of homozygotes: 110

European (Finnish)
type: Population
allele count: 18
allele frequency: 1.097560975609756e-1
allele num: 164
num of homozygotes: 2

South Asian
type: Population
allele count: 65
allele frequency: 1.785714285714286e-1
allele num: 364
num of homozygotes: 10

African
type: Population
allele count: 156
allele frequency: 1.88861985472155e-1
allele num: 826
num of homozygotes: 19

East Asian
type: Population
allele count: 33
allele frequency: 1.75531914893617e-1
allele num: 188
num of homozygotes: 11

Latino
type: Population
allele count: 16
allele frequency: 1.012658227848101e-1
allele num: 158
num of homozygotes: 4

DP
type: SiteQuality
SIO_000300: 1.71739e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 3.271e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.696e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 2.304e1

GenotypeQuality
all individuals: 536
bin: 4.25e1
variant carriers: 16

GenotypeQuality
all individuals: 170
bin: 7.75e1
variant carriers: 29

GenotypeQuality
all individuals: 6890
bin: 1.25e1
variant carriers: 158

GenotypeQuality
all individuals: 598
bin: 9.75e1
variant carriers: 89

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 497
bin: 3.75e1
variant carriers: 20

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 15

East Asian
type: Population
allele count: 2
allele frequency: 1.063829787234043e-2
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 1.098901098901099e-2
allele num: 364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 52
allele frequency: 2.918069584736251e-2
allele num: 1782
num of homozygotes: 3

Other
type: Population
allele count: 3
allele frequency: 1.0e-1
allele num: 30
num of homozygotes: 1

African
type: Population
allele count: 21
allele frequency: 2.542372881355932e-2
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.219512195121951e-2
allele num: 164
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.71739e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 3.271e0

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.696e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.304e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 770
bin: 1.75e1
variant carriers: 43

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 14

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 152
bin: 5.75e1
variant carriers: 19

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 86

GenotypeQuality
all individuals: 86
bin: 7.75e1
variant carriers: 7

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 1.353965183752418e-2
allele num: 1034
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 8.695652173913044e-3
allele num: 230
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 2.272727272727273e-1
allele num: 22
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 5.147058823529412e-2
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

African
type: Population
allele count: 115
allele frequency: 1.774691358024691e-1
allele num: 648
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 1
allele frequency: 9.259259259259259e-3
allele num: 108
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.957e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.06118e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.455e1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e0

GenotypeQuality
all individuals: 82
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 107
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 367
bin: 2.75e1
variant carriers: 26

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 15

GenotypeQuality
all individuals: 190
bin: 6.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 8.704061895551257e-3
allele num: 1034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.851851851851852e-2
allele num: 108
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.347826086956522e-3
allele num: 230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.612903225806452e-2
allele num: 124
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 6.172839506172839e-3
allele num: 648
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.455e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.957e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e0

DP
type: SiteQuality
SIO_000300: 1.06118e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 62

GenotypeQuality
all individuals: 5627
bin: 2.5e0
variant carriers: 1059

GenotypeQuality
all individuals: 3329
bin: 7.5e0
variant carriers: 795

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 257

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 17

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 44

GenotypeQuality
all individuals: 106
bin: 7.25e1
variant carriers: 36

European (Non-Finnish)
type: Population
allele count: 213
allele frequency: 2.059961315280464e-1
allele num: 1034
num of homozygotes: 11

Other
type: Population
allele count: 2
allele frequency: 9.090909090909091e-2
allele num: 22
num of homozygotes: 0

Latino
type: Population
allele count: 37
allele frequency: 2.720588235294117e-1
allele num: 136
num of homozygotes: 2

South Asian
type: Population
allele count: 68
allele frequency: 2.956521739130435e-1
allele num: 230
num of homozygotes: 6

African
type: Population
allele count: 70
allele frequency: 1.080246913580247e-1
allele num: 648
num of homozygotes: 2

East Asian
type: Population
allele count: 48
allele frequency: 3.870967741935484e-1
allele num: 124
num of homozygotes: 7

European (Finnish)
type: Population
allele count: 22
allele frequency: 2.037037037037037e-1
allele num: 108
num of homozygotes: 2

MQ
type: SiteQuality
SIO_000300: 5.455e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e0

DP
type: SiteQuality
SIO_000300: 1.06118e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.957e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 36

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 41

GenotypeQuality
all individuals: 107
bin: 6.75e1
variant carriers: 38

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 33

GenotypeQuality
all individuals: 367
bin: 2.75e1
variant carriers: 69

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 230

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 16

African
type: Population
allele count: 101
allele frequency: 1.558641975308642e-1
allele num: 648
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 63
allele frequency: 6.09284332688588e-2
allele num: 1034
num of homozygotes: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.130434782608696e-1
allele num: 230
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 8.870967741935484e-2
allele num: 124
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 4.545454545454546e-2
allele num: 22
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 24
allele frequency: 2.222222222222222e-1
allele num: 108
num of homozygotes: 1

Latino
type: Population
allele count: 13
allele frequency: 9.558823529411764e-2
allele num: 136
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.957e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.33e0

DP
type: SiteQuality
SIO_000300: 1.06118e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.455e1

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 3329
bin: 7.5e0
variant carriers: 740

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 23

GenotypeQuality
all individuals: 107
bin: 6.75e1
variant carriers: 37

GenotypeQuality
all individuals: 190
bin: 6.25e1
variant carriers: 50

GenotypeQuality
all individuals: 106
bin: 7.25e1
variant carriers: 48

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 271

African
type: Population
allele count: 74
allele frequency: 1.141975308641975e-1
allele num: 648
num of homozygotes: 2

East Asian
type: Population
allele count: 22
allele frequency: 1.774193548387097e-1
allele num: 124
num of homozygotes: 1

South Asian
type: Population
allele count: 39
allele frequency: 1.695652173913043e-1
allele num: 230
num of homozygotes: 1

Other
type: Population
allele count: 7
allele frequency: 3.181818181818182e-1
allele num: 22
num of homozygotes: 2

Latino
type: Population
allele count: 23
allele frequency: 1.691176470588235e-1
allele num: 136
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 390
allele frequency: 3.771760154738878e-1
allele num: 1034
num of homozygotes: 53

European (Finnish)
type: Population
allele count: 20
allele frequency: 1.851851851851852e-1
allele num: 108
num of homozygotes: 3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.06118e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.957e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e0

MQ
type: SiteQuality
SIO_000300: 5.455e1

GenotypeQuality
all individuals: 367
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 8.704061895551257e-3
allele num: 1034
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.347826086956522e-3
allele num: 230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.54320987654321e-3
allele num: 648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.957e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.06118e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.455e1

GenotypeQuality
all individuals: 58
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 13
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.791505791505791e-3
allele num: 518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.0e-2
allele num: 100
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.219e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 2.644e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

QD
type: SiteQuality
SIO_000300: 5.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.633e-1

DP
type: SiteQuality
SIO_000300: 2.51009e5

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 442
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.0e-2
allele num: 100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.930501930501931e-3
allele num: 518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.633e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 2.644e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

QD
type: SiteQuality
SIO_000300: 5.42e0

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.219e1

DP
type: SiteQuality
SIO_000300: 2.51009e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 26
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 1

Latino
type: Population
allele count: 4
allele frequency: 5.555555555555555e-2
allele num: 72
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.0e-1
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.0e-2
allele num: 100
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.401360544217687e-3
allele num: 294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.702702702702703e-2
allele num: 518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.219e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.633e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

QD
type: SiteQuality
SIO_000300: 5.42e0

DP
type: SiteQuality
SIO_000300: 2.51009e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 2.644e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 92
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 767
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 60
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 218
bin: 6.25e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

African
type: Population
allele count: 27
allele frequency: 1.366396761133603e-2
allele num: 1976
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 8.458646616541353e-3
allele num: 1064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 4.517528008673654e-3
allele num: 5534
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.952569169960474e-3
allele num: 506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.692307692307693e-3
allele num: 520
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 1.724137931034483e-2
allele num: 464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.326e1

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.549e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.95057e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

GenotypeQuality
all individuals: 9252
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 6059
bin: 2.25e1
variant carriers: 15

GenotypeQuality
all individuals: 1516
bin: 3.25e1
variant carriers: 17

GenotypeQuality
all individuals: 117
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1410
bin: 2.75e1
variant carriers: 11

GenotypeQuality
all individuals: 327
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 92
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.22e-2

FS
type: SiteQuality
SIO_000300: 5.699e0

DP
type: SiteQuality
SIO_000300: 3.14334e5

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 7.81e0

MQ
type: SiteQuality
SIO_000300: 6.284e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 10539
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 549
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7460
bin: 1.25e1
variant carriers: 16

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 3.38918e5

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.57e-2

MQ
type: SiteQuality
SIO_000300: 6.289e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.993e1

GenotypeQuality
all individuals: 430
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.434589800443459e-3
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2864
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 4.65572e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.39e-2

FS
type: SiteQuality
SIO_000300: 6.074e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 8.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30084
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16745
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 7.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.39e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 6.074e0

DP
type: SiteQuality
SIO_000300: 4.65572e5

QD
type: SiteQuality
SIO_000300: 8.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 925
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13047
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 31262
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1400
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 134
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 392
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 980
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 8.336807002917883e-4
allele num: 9596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.087172218284905e-4
allele num: 2822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.193317422434368e-3
allele num: 838
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.66e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

VQSLOD
type: SiteQuality
SIO_000300: -1.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.64e-1

FS
type: SiteQuality
SIO_000300: 2.322e0

DP
type: SiteQuality
SIO_000300: 5.13943e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.719e1

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36819
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6512
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4064
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.15473441108545e-3
allele num: 1732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.048e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.096e0

MQ
type: SiteQuality
SIO_000300: 6.213e1

VQSLOD
type: SiteQuality
SIO_000300: -1.585e0

DP
type: SiteQuality
SIO_000300: 6.01623e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1937
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.872680291284943e-5
allele num: 17028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2078
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.924e1

DP
type: SiteQuality
SIO_000300: 6.29217e5

VQSLOD
type: SiteQuality
SIO_000300: -1.08e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.022e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.49e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

GenotypeQuality
all individuals: 949
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 9.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18158
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.235e0

MQ
type: SiteQuality
SIO_000300: 6.302e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.47e-1

QD
type: SiteQuality
SIO_000300: 5.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 6.46852e5

GenotypeQuality
all individuals: 144
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2866
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.822821728034998e-4
allele num: 5486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3382
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.719e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

MQ
type: SiteQuality
SIO_000300: 6.104e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.68e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

DP
type: SiteQuality
SIO_000300: 7.1804e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.033e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.443e0

GenotypeQuality
all individuals: 323
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33068
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.902286740029657e-5
allele num: 25626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.528e0

DP
type: SiteQuality
SIO_000300: 7.52826e5

MQRankSum
type: SiteQuality
SIO_000300: -1.036e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQ
type: SiteQuality
SIO_000300: 6.213e1

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
all individuals: 178
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 586
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.717472118959108e-4
allele num: 5380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6752
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 8.48182e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 895
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.571619606027876e-5
allele num: 38886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 3.087e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.097e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

DP
type: SiteQuality
SIO_000300: 9.33184e5

QD
type: SiteQuality
SIO_000300: 3.198e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.417e0

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.507396820620831e-5
allele num: 39882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4680
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.884e0

MQRankSum
type: SiteQuality
SIO_000300: 9.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 9.48741e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 5.09e0

VQSLOD
type: SiteQuality
SIO_000300: -1.753e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

GenotypeQuality
all individuals: 1060
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 791
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.933488012374323e-5
allele num: 51720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.145737855178735e-4
allele num: 8728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7500
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.257e1

QD
type: SiteQuality
SIO_000300: 7.41e0

DP
type: SiteQuality
SIO_000300: 1.117504e6

VQSLOD
type: SiteQuality
SIO_000300: -1.07e0

FS
type: SiteQuality
SIO_000300: 1.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 354
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.744165765514354e-5
allele num: 57334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

DP
type: SiteQuality
SIO_000300: 1.214624e6

VQSLOD
type: SiteQuality
SIO_000300: 2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.435e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

QD
type: SiteQuality
SIO_000300: 8.58e0

GenotypeQuality
all individuals: 612
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5085
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 183
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.450957632037145e-4
allele num: 13784
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 1.241649e6

QD
type: SiteQuality
SIO_000300: 1.3e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.0344e1

VQSLOD
type: SiteQuality
SIO_000300: -8.532999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeQuality
all individuals: 923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 969
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59994
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.218620521569583e-4
allele num: 8206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.202e0

DP
type: SiteQuality
SIO_000300: 1.26559e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1817
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 378
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variant carriers: 0

GenotypeQuality
all individuals: 4796
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variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.632493143528797e-5
allele num: 61256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.28e-1

DP
type: SiteQuality
SIO_000300: 1.294037e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: -4.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.526e1

GenotypeQuality
all individuals: 782
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
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variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615195761726321e-5
allele num: 61912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10780
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.464e0

QD
type: SiteQuality
SIO_000300: 3.71e0

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-1

DP
type: SiteQuality
SIO_000300: 1.30838e6

VQSLOD
type: SiteQuality
SIO_000300: -2.412e0

FS
type: SiteQuality
SIO_000300: 2.539e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6433
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 531
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56206067043644e-5
allele num: 64018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.426e0

QD
type: SiteQuality
SIO_000300: 1.468e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

FS
type: SiteQuality
SIO_000300: 1.445e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.287e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.356858e6

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 1363
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 41370
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variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.714196665108306e-4
allele num: 64170
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.964129135113592e-5
allele num: 10036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15996
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

FS
type: SiteQuality
SIO_000300: 5.69e-1

QD
type: SiteQuality
SIO_000300: 1.315e1

VQSLOD
type: SiteQuality
SIO_000300: 9.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 1.362602e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1429
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2010
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variant carriers: 0

GenotypeQuality
all individuals: 507
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.228201295465869e-5
allele num: 16056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64490
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.286e1

DP
type: SiteQuality
SIO_000300: 1.371585e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.206e0

MQRankSum
type: SiteQuality
SIO_000300: -5.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.519e-1

MQ
type: SiteQuality
SIO_000300: 5.867e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

GenotypeQuality
all individuals: 2260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 42045
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GenotypeQuality
all individuals: 224
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GenotypeQuality
all individuals: 28
bin: 1.75e1
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GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539266693347289e-5
allele num: 64966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.383058e6

FS
type: SiteQuality
SIO_000300: 7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.53e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -2.862e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
all individuals: 2285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6790
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 274
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 310
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.072857450142888e-5
allele num: 65086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16184
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.385864e6

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

FS
type: SiteQuality
SIO_000300: 6.71e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

QD
type: SiteQuality
SIO_000300: 1.324e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
all individuals: 42934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
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variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
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GenotypeQuality
all individuals: 136
bin: 4.75e1
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GenotypeQuality
all individuals: 7153
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GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.25e1
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GenotypeQuality
all individuals: 744
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.027550711474417e-5
allele num: 66060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.413999e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 8.398999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.852e0

GenotypeQuality
all individuals: 1938
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3049
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503985561738607e-5
allele num: 66490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.431148e6

FS
type: SiteQuality
SIO_000300: 5.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.83e-1

QD
type: SiteQuality
SIO_000300: 1.488e1

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7387
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2611
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508566275924256e-5
allele num: 66540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 3.131e0

DP
type: SiteQuality
SIO_000300: 1.432902e6

MQ
type: SiteQuality
SIO_000300: 5.884e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42985
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.566e1

DP
type: SiteQuality
SIO_000300: 1.434304e6

MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.514e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

FS
type: SiteQuality
SIO_000300: 4.982e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.302e0

MQ
type: SiteQuality
SIO_000300: 5.832e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.575948599830282e-3
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

FS
type: SiteQuality
SIO_000300: 1.779e0

QD
type: SiteQuality
SIO_000300: 1.124e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.84e-1

DP
type: SiteQuality
SIO_000300: 1.437367e6

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42974
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
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variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e0

FS
type: SiteQuality
SIO_000300: 4.179e0

QD
type: SiteQuality
SIO_000300: 6.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.437191e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7405
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.738e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

FS
type: SiteQuality
SIO_000300: 2.392e0

QD
type: SiteQuality
SIO_000300: 1.329e1

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.438115e6

MQ
type: SiteQuality
SIO_000300: 5.919e1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42663
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1979
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.5e0

DP
type: SiteQuality
SIO_000300: 1.438583e6

VQSLOD
type: SiteQuality
SIO_000300: -2.763e-1

FS
type: SiteQuality
SIO_000300: 3.178e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.45e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 737
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GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7413
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.595604775912787e-4
allele num: 11558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.275e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.43857e6

VQSLOD
type: SiteQuality
SIO_000300: -2.004e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 1.4606e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2669
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variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

DP
type: SiteQuality
SIO_000300: 1.43882e6

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

QD
type: SiteQuality
SIO_000300: 1.376e1

GenotypeQuality
all individuals: 147
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 911
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variant carriers: 1

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.017e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.438835e6

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.018e0

QD
type: SiteQuality
SIO_000300: 1.296e1

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.78e-1

FS
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.31e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.438396e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.02e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

GenotypeQuality
all individuals: 3125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.668e0

DP
type: SiteQuality
SIO_000300: 1.438388e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 9.92e0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.419e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

VQSLOD
type: SiteQuality
SIO_000300: -2.339e0

QD
type: SiteQuality
SIO_000300: 8.550000000000001e0

FS
type: SiteQuality
SIO_000300: 3.565e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

DP
type: SiteQuality
SIO_000300: 1.439063e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.501e0

DP
type: SiteQuality
SIO_000300: 1.439053e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

FS
type: SiteQuality
SIO_000300: 4.949e0

MQ
type: SiteQuality
SIO_000300: 5.867e1

QD
type: SiteQuality
SIO_000300: 1.147e1

VQSLOD
type: SiteQuality
SIO_000300: -1.181e0

GenotypeQuality
all individuals: 182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41842
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21300339640951e-4
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.318e0

MQRankSum
type: SiteQuality
SIO_000300: 9.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 6.860000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.158e1

DP
type: SiteQuality
SIO_000300: 1.439122e6

GenotypeQuality
all individuals: 760
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7432
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.425712553062462e-4
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 7.94e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

VQSLOD
type: SiteQuality
SIO_000300: 6.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.439146e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1