13-99489812-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489812
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489812
    reference: chr 13
allele count: 5
allele frequency: 4.204083005414859e-5
allele num: 118932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.413A>G
  hgvsp: ENSP00000403528.1:p.Asn138Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.271A>G
  hgvsp: ENSP00000396897.1:p.Asn91Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4181A>G
  hgvsp: ENSP00000365643.1:p.Asn1394Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4184A>G
  hgvsp: ENSP00000341086.2:p.Asn1395Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.113A>G
  hgvsp: ENSP00000344702.3:p.Asn38Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*72A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11029
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn1394Ser
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

13-99489822-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489822
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489822
    reference: chr 13
allele count: 1
allele frequency: 8.45809016324114e-6
allele num: 118230
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4171C>G
  hgvsp: ENSP00000365643.1:p.Leu1391Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*62C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.261C>G
  hgvsp: ENSP00000396897.1:p.Leu88Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.103C>G
  hgvsp: ENSP00000344702.3:p.Leu35Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4174C>G
  hgvsp: ENSP00000341086.2:p.Leu1392Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.403C>G
  hgvsp: ENSP00000403528.1:p.Leu135Val
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39235
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
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genotype quality: GenotypeQuality
  all individuals: 224
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1391Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/13-99489828-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489828
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489828
    reference: chr 13
allele count: 1
allele frequency: 8.482051978014521e-6
allele num: 117896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*56T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.255T>G
  hgvsp: ENSP00000396897.1:p.Ser86Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4165T>G
  hgvsp: ENSP00000365643.1:p.Ser1389Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4168T>G
  hgvsp: ENSP00000341086.2:p.Ser1390Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.397T>G
  hgvsp: ENSP00000403528.1:p.Ser133Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.97T>G
  hgvsp: ENSP00000344702.3:p.Ser33Ala
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser1389Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/13-99489838-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489838
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489838
    reference: chr 13
allele count: 1
allele frequency: 8.599043786330961e-6
allele num: 116292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4158T>G
  hgvsp: ENST00000339416.2:c.4158T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4155T>G
  hgvsp: ENST00000376460.1:c.4155T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.387T>G
  hgvsp: ENST00000449796.1:c.387T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.245T>G
  hgvsp: ENST00000450257.1:c.245T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.87T>G
  hgvsp: ENST00000340449.3:c.87T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*46T>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val1385Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

13-99489846-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489846
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489846
    reference: chr 13
allele count: 1
allele frequency: 8.777319406653208e-6
allele num: 113930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.79G>A
  hgvsp: ENSP00000344702.3:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4147G>A
  hgvsp: ENSP00000365643.1:p.Ala1383Thr
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.237G>A
  hgvsp: ENSP00000396897.1:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.379G>A
  hgvsp: ENSP00000403528.1:p.Ala127Thr
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4150G>A
  hgvsp: ENSP00000341086.2:p.Ala1384Thr
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*38G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala1383Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

13-99489847-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489847
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489847
    reference: chr 13
allele count: 4
allele frequency: 3.519639588906096e-5
allele num: 113648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4149C>T
  hgvsp: ENST00000339416.2:c.4149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*37C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4146C>T
  hgvsp: ENST00000376460.1:c.4146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.378C>T
  hgvsp: ENST00000449796.1:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.78C>T
  hgvsp: ENST00000340449.3:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.236C>T
  hgvsp: ENST00000450257.1:c.236C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33152
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp1382Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

13-99489847-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489847
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489847
    reference: chr 13
allele count: 41
allele frequency: 3.607630578628749e-4
allele num: 113648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.378C>A
  hgvsp: ENSP00000403528.1:p.Asp126Glu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.236C>A
  hgvsp: ENSP00000396897.1:p.Asp79Glu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*37C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4146C>A
  hgvsp: ENSP00000365643.1:p.Asp1382Glu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.78C>A
  hgvsp: ENSP00000344702.3:p.Asp26Glu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4149C>A
  hgvsp: ENSP00000341086.2:p.Asp1383Glu
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33152
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp1382Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

13-99489851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489851
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489851
    reference: chr 13
allele count: 3
allele frequency: 2.668137106672121e-5
allele num: 112438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.74C>T
  hgvsp: ENSP00000344702.3:p.Ser25Leu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4145C>T
  hgvsp: ENSP00000341086.2:p.Ser1382Leu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*33C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.374C>T
  hgvsp: ENSP00000403528.1:p.Ser125Leu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.232C>T
  hgvsp: ENSP00000396897.1:p.Ser78Leu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4142C>T
  hgvsp: ENSP00000365643.1:p.Ser1381Leu
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser1381Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

13-99489858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489858
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489858
    reference: chr 13
allele count: 1
allele frequency: 9.191852342083978e-6
allele num: 108792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4138G>A
  hgvsp: ENSP00000341086.2:p.Gly1380Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.225G>A
  hgvsp: ENSP00000396897.1:p.Gly76Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.367G>A
  hgvsp: ENSP00000403528.1:p.Gly123Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.67G>A
  hgvsp: ENSP00000344702.3:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4135G>A
  hgvsp: ENSP00000365643.1:p.Gly1379Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*26G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26294
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly1379Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/13-99489879-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489879
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489878
    reference: chr 13
allele count: 320
allele frequency: 3.137500980469056e-3
allele num: 101992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4133-17delT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.220-17delT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.362-17delT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.62-17delT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4130-17delT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*21-17delT
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 2.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8616
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14349
  bin: 2.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 19332
  bin: 1.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 1.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 16781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18062
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3851
  bin: 9.75e1
  variant carriers: 308
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 5
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: CA
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

13-99489898-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489898
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489898
    reference: chr 13
allele count: 1
allele frequency: 1.053540951136771e-5
allele num: 94918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.220-35C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.62-35C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4130-35C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4133-35C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.362-35C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*21-35C>T
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17451
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5678
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7645
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

13-99489912-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99489912
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99489912
    reference: chr 13
allele count: 1
allele frequency: 1.135460429204042e-5
allele num: 88070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.362-49C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4133-49C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.220-49C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4130-49C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.62-49C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*21-49C>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13750
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19218
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5421
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 7809
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5418
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5561
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/13-99497536-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497536
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497536
    reference: chr 13
allele count: 2
allele frequency: 2.382029965936971e-5
allele num: 83962
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+642T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+642T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+642T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+642T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+47T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+642T>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13513
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9314
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genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
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genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 3652
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 12041
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 2489
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 8165
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genotype quality: GenotypeQuality
  all individuals: 6829
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 5894
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genotype quality: GenotypeQuality
  all individuals: 4257
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

13-99497544-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497544
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497544
    reference: chr 13
allele count: 1
allele frequency: 1.182312603452353e-5
allele num: 84580
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+634G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+634G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+634G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+634G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+39G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+634G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11742
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 299
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genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 373
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genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 820
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
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genotype quality: GenotypeQuality
  all individuals: 836
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13583
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genotype quality: GenotypeQuality
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

13-99497548-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497548
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497548
    reference: chr 13
allele count: 1
allele frequency: 1.176498270547542e-5
allele num: 84998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+630G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+35G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+630G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+630G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+630G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+630G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11486
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 87
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 14009
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genotype quality: GenotypeQuality
  all individuals: 744
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

13-99497549-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497549
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497549
    reference: chr 13
allele count: 3
allele frequency: 3.524436090225564e-5
allele num: 85120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+629A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+629A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+34A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+629A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+629A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+629A>C
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15557
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4843
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

13-99497560-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497560
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497560
    reference: chr 13
allele count: 1
allele frequency: 1.149610282114363e-5
allele num: 86986
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+618T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+618T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+618T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+618T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+23T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+618T>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17526
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14378
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

13-99497562-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497562
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497562
    reference: chr 13
allele count: 6
allele frequency: 6.863732039901162e-5
allele num: 87416
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+616A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+616A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+616A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+21A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+616A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+616A>T
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11557
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18237
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4627
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 877
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

13-99497570-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497570
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497570
    reference: chr 13
allele count: 1
allele frequency: 1.122611643727969e-5
allele num: 89078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+608C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+608C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+608C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+608C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+13C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+608C>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24403
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 703
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/13-99497574-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497574
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497574
    reference: chr 13
allele count: 1
allele frequency: 1.107812292285195e-5
allele num: 90268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+604T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+604T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+604T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+604T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+604T>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.361+9T>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2526
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25387
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

13-99498759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498759
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498759
    reference: chr 13
allele count: 1
allele frequency: 8.871382693706642e-6
allele num: 112722
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-514G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4134+15G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.473+15G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-514G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1133G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-77+15G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-445G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 8576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

13-99497591-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497591
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497591
    reference: chr 13
allele count: 1
allele frequency: 1.051812272545596e-5
allele num: 95074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.353T>C
  hgvsp: ENSP00000403528.1:p.Val118Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+587T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+587T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+587T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+587T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+587T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11364
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1525
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32332
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val118Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99497607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497607
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497607
    reference: chr 13
allele count: 1
allele frequency: 1.042665888142803e-5
allele num: 95908
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+571G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.337G>A
  hgvsp: ENSP00000403528.1:p.Val113Met
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+571G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+571G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+571G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+571G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31054
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val113Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

13-99497618-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497618
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497618
    reference: chr 13
allele count: 1
allele frequency: 1.050530517911545e-5
allele num: 95190
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+560A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+560A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+560A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+560A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+560A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.326A>G
  hgvsp: ENSP00000403528.1:p.Lys109Arg
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys109Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

13-99497641-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497641
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497641
    reference: chr 13
allele count: 1
allele frequency: 1.081127832554921e-5
allele num: 92496
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+537T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-15T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+537T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+537T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+537T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+537T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16324
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21318
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3625
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

13-99497651-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497651
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497651
    reference: chr 13
allele count: 2
allele frequency: 2.210530969538883e-5
allele num: 90476
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+527A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+527A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+527A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+527A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+527A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-25A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8926
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

13-99497657-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497657
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497657
    reference: chr 13
allele count: 1
allele frequency: 1.122435235486912e-5
allele num: 89092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-31A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+521A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+521A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+521A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+521A>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+521A>T
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18556
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6812
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

13-99497672-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99497672
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99497672
    reference: chr 13
allele count: 20
allele frequency: 2.414642391461824e-4
allele num: 82828
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-46T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+506T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+506T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+506T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+506T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+506T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17105
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11043
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2379
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13726
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5318
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2399
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7355
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5121
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

13-99498130-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498130
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498130
    reference: chr 13
allele count: 1
allele frequency: 9.618159084351256e-6
allele num: 103970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+48A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+48A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-504A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+48A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+48A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+48A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16127
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6507
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3785
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD

13-99498136-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498136
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498136
    reference: chr 13
allele count: 1
allele frequency: 9.575609008732955e-6
allele num: 104432
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+42T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+42T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+42T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-510T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+42T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+42T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11418
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6429
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4470
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6292
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

13-99498137-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498137
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498137
    reference: chr 13
allele count: 1
allele frequency: 9.583317361137732e-6
allele num: 104348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+41A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-511A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+41A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+41A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+41A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+41A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11017
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6364
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6292
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

13-99498143-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498143
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498143
    reference: chr 13
allele count: 1
allele frequency: 9.544534799373879e-6
allele num: 104772
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+35C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+35C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+35C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+35C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+35C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-517C>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99498145-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498145
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498144
    reference: chr 13
allele count: 1
allele frequency: 9.546174847738511e-6
allele num: 104754
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+32delA
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+32delA
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+32delA
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-520delA
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+32delA
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+32delA
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5745
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: CT
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-99498155-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498155
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498155
    reference: chr 13
allele count: 2
allele frequency: 1.892183390414199e-5
allele num: 105698
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+23G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-529G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+23G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+23G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+23G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+23G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25400
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2622
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28504
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

13-99498158-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498158
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498158
    reference: chr 13
allele count: 1
allele frequency: 9.391611412686188e-6
allele num: 106478
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+20A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-532A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+20A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+20A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+20A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+20A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8652
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

13-99498160-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498160
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498160
    reference: chr 13
allele count: 1
allele frequency: 9.390905846777981e-6
allele num: 106486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+18C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-534C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+18C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+18C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+18C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+18C>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8500
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

13-99498168-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498168
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498168
    reference: chr 13
allele count: 1
allele frequency: 9.274201027581474e-6
allele num: 107826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-542A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+10A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+10A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+10A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+10A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+10A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7987
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

13-99498171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498171
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498171
    reference: chr 13
allele count: 2
allele frequency: 1.849488616397566e-5
allele num: 108138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+7C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+7C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+7C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+7C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-545C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+7C>T
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4034
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
hgvs: c.4129+7C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

13-99498175-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498175
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498176
    reference: chr 13
allele count: 1
allele frequency: 9.215230933687198e-6
allele num: 108516
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4132+2dupT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-550dupT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*20+2dupT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.219+2dupT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4129+2dupT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.61+2dupT
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7635
  bin: 2.25e1
  variant carriers: 0
hgvs: c.4129+2dupT
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

13-99498190-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498190
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498190
    reference: chr 13
allele count: 1
allele frequency: 9.155832265152902e-6
allele num: 109220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4120A>G
  hgvsp: ENSP00000341086.2:p.Thr1374Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4117A>G
  hgvsp: ENSP00000365643.1:p.Thr1373Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*8A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.207A>G
  hgvsp: ENSP00000396897.1:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.49A>G
  hgvsp: ENSP00000344702.3:p.Thr17Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-564A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38004
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1373Ala
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

13-99498193-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498193
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498193
    reference: chr 13
allele count: 3
allele frequency: 2.750224601675804e-5
allele num: 109082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4117C>G
  hgvsp: ENSP00000341086.2:p.Leu1373Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.204C>G
  hgvsp: ENSP00000396897.1:p.Leu69Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.*5C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.46C>G
  hgvsp: ENSP00000344702.3:p.Leu16Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-567C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4114C>G
  hgvsp: ENSP00000365643.1:p.Leu1372Val
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32103
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7713
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37981
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu1372Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-99498205-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498205
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498205
    reference: chr 13
allele count: 2
allele frequency: 1.850036075703476e-5
allele num: 108106
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4102C>T
  hgvsp: ENST00000376460.1:c.4102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.583C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4175C>T
  hgvsp: ENSP00000401958.2:p.Pro1392Leu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.34C>T
  hgvsp: ENST00000340449.3:c.34C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-579C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.192C>T
  hgvsp: ENST00000450257.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4105C>T
  hgvsp: ENST00000339416.2:c.4105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30770
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro1392Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

13-99498211-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498211
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498211
    reference: chr 13
allele count: 4
allele frequency: 3.747844989131249e-5
allele num: 106728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.28G>A
  hgvsp: ENSP00000344702.3:p.Gly10Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4169G>A
  hgvsp: ENSP00000401958.2:p.Gly1390Glu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-585G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.577G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.186G>A
  hgvsp: ENSP00000396897.1:p.Gly63Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4099G>A
  hgvsp: ENSP00000341086.2:p.Gly1367Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4096G>A
  hgvsp: ENSP00000365643.1:p.Gly1366Ser
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9779
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly1366Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

13-99498214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498214
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498214
    reference: chr 13
allele count: 9
allele frequency: 8.466126088837883e-5
allele num: 106306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4166C>T
  hgvsp: ENSP00000401958.2:p.Ala1389Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4093C>T
  hgvsp: ENST00000376460.1:c.4093C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-588C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4096C>T
  hgvsp: ENST00000339416.2:c.4096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.183C>T
  hgvsp: ENST00000450257.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.25C>T
  hgvsp: ENST00000340449.3:c.25C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.574C>T
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10817
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala1389Val
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

13-99498220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498220
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498220
    reference: chr 13
allele count: 1
allele frequency: 9.62278675904542e-6
allele num: 103920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.177C>T
  hgvsp: ENSP00000396897.1:p.Gln60Ter
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4090C>T
  hgvsp: ENSP00000341086.2:p.Gln1364Ter
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.19C>T
  hgvsp: ENSP00000344702.3:p.Gln7Ter
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-594C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.568C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4087C>T
  hgvsp: ENSP00000365643.1:p.Gln1363Ter
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4160C>T
  hgvsp: ENSP00000401958.2:p.Ala1387Val
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln1363Ter
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

13-99498220-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498220
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498220
    reference: chr 13
allele count: 1
allele frequency: 9.62278675904542e-6
allele num: 103920
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4087C>A
  hgvsp: ENSP00000365643.1:p.Gln1363Lys
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4090C>A
  hgvsp: ENSP00000341086.2:p.Gln1364Lys
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-594C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4160C>A
  hgvsp: ENSP00000401958.2:p.Ala1387Glu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.568C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.177C>A
  hgvsp: ENSP00000396897.1:p.Gln60Lys
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.19C>A
  hgvsp: ENSP00000344702.3:p.Gln7Lys
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33546
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln1363Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-99498222-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498222
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498222
    reference: chr 13
allele count: 1
allele frequency: 9.685230024213076e-6
allele num: 103250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.17T>C
  hgvsp: ENSP00000344702.3:p.Leu6Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4158T>C
  hgvsp: ENST00000448493.2:c.4158T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.175T>C
  hgvsp: ENSP00000396897.1:p.Leu59Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-596T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4088T>C
  hgvsp: ENSP00000341086.2:p.Leu1363Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4085T>C
  hgvsp: ENSP00000365643.1:p.Leu1362Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.566T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12772
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33345
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu1362Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

13-99498223-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498223
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498223
    reference: chr 13
allele count: 1
allele frequency: 9.732738987405836e-6
allele num: 102746
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4084T>C
  hgvsp: ENST00000376460.1:c.4084T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.174T>C
  hgvsp: ENST00000450257.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4087T>C
  hgvsp: ENST00000339416.2:c.4087T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4157T>C
  hgvsp: ENSP00000401958.2:p.Ile1386Thr
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-597T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.565T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.16T>C
  hgvsp: ENST00000340449.3:c.16T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8808
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile1386Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

13-99498238-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498238
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498238
    reference: chr 13
allele count: 1
allele frequency: 1.04716427913211e-5
allele num: 95496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4142A>G
  hgvsp: ENSP00000401958.2:p.Asn1381Ser
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4072A>G
  hgvsp: ENSP00000341086.2:p.Met1358Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.1A>G
  hgvsp: ENSP00000344702.3:p.Met1?
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4069A>G
  hgvsp: ENSP00000365643.1:p.Met1357Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-612A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.159A>G
  hgvsp: ENSP00000396897.1:p.Met54Val
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.550A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

13-99498252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498252
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498252
    reference: chr 13
allele count: 4
allele frequency: 4.702562896778744e-5
allele num: 85060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-7G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-626G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-7G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-7G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-14G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.145G>A
  hgvsp: ENSP00000396897.1:p.Arg49His
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.536G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16718
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg49His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

13-99498253-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498253
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498253
    reference: chr 13
allele count: 3
allele frequency: 3.559309968440785e-5
allele num: 84286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-627C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-15C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.144C>T
  hgvsp: ENSP00000396897.1:p.Arg49Cys
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-8C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-8C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-8C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.535C>T
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27311
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg49Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-99498254-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498254
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498254
    reference: chr 13
allele count: 1
allele frequency: 1.19740402806715e-5
allele num: 83514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-9C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-16C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-628C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.534C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.143C>G
  hgvsp: ENST00000450257.1:c.143C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-9C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-9C>G
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13938
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser48Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

13-99498259-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498259
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498259
    reference: chr 13
allele count: 6
allele frequency: 7.544133179097722e-5
allele num: 79532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-14G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-14G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-21G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-633G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-14G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.529G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.138G>A
  hgvsp: ENSP00000396897.1:p.Val47Ile
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15234
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14089
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Val47Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

13-99498279-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498279
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498279
    reference: chr 13
allele count: 2
allele frequency: 3.284719484955985e-5
allele num: 60888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-41G>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.118G>C
  hgvsp: ENSP00000396897.1:p.Arg40Pro
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-34G>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-34G>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-653G>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-34G>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.509G>C
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14880
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4027
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg40Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

13-99498285-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498285
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498285
    reference: chr 13
allele count: 4
allele frequency: 7.119971520113919e-5
allele num: 56180
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-40A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-659A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-47A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.503A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.112A>C
  hgvsp: ENSP00000396897.1:p.His38Pro
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-40A>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-40A>C
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His38Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99498295-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498295
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498295
    reference: chr 13
allele count: 1
allele frequency: 2.080992217089108e-5
allele num: 48054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.102C>G
  hgvsp: ENSP00000396897.1:p.Pro35Ala
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-669C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-50C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-50C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-57C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.493C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-50C>G
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12663
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4026
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro35Ala
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/13-99498297-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498297
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498297
    reference: chr 13
allele count: 1
allele frequency: 2.212193611184851e-5
allele num: 45204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-671G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-52G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-52G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-59G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-52G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.491G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.100G>T
  hgvsp: ENSP00000396897.1:p.Gly34Val
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9768
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Gly34Val
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

13-99498307-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498307
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498307
    reference: chr 13
allele count: 1
allele frequency: 2.624396388830569e-5
allele num: 38104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-62G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-62G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-62G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-69G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.90G>A
  hgvsp: ENSP00000396897.1:p.Glu31Lys
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.481G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-681G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21640
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2200
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu31Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

13-99498321-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498321
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498319
    reference: chr 13
allele count: 4
allele frequency: 1.235101587105539e-4
allele num: 32386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-9_-76-8delAT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-78_4065-77delAT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-78_4135-77delAT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-9_474-8delAT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-697_318-696delAT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-78_4062-77delAT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-9_83-8delAT
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26006
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 26425
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5022
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: c.-76-9_-76-8delAT
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: CAT
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

13-99498322-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498322
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498322
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 31342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-8T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-696T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-77T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-77T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-8T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-8T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-77T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15240
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13356
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27404
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 9.75e1
  variant carriers: 0
hgvs: c.-76-8T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

13-99498325-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498325
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498325
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 30838
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-80T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-80T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-699T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-11T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-80T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-11T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-11T>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14886
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27897
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4910
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

13-99498330-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498330
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498330
    reference: chr 13
allele count: 1
allele frequency: 3.461644973691498e-5
allele num: 28888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-16T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-704T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-85T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-85T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-16T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-16T>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-85T>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10044
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

13-99498341-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498341
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498341
    reference: chr 13
allele count: 1
allele frequency: 3.716919417187035e-5
allele num: 26904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-27T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-27T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-96T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-715T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-96T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-96T>C
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-27T>C
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

13-99498354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498354
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498354
    reference: chr 13
allele count: 5
allele frequency: 1.970521005753921e-4
allele num: 25374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-109G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-728G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-109G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-40G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-40G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-109G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-40G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30782
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28047
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2973
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff

13-99498355-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498355
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498355
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 25234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-41C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-729C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-110C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.474-41C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-110C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4135-110C>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-76-41C>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9363
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26990
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

13-99498728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498728
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498728
    reference: chr 13
allele count: 1
allele frequency: 8.874059349708931e-6
allele num: 112688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-483G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4134+46G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-483G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1102G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-77+46G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-414G>A
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.473+46G>A
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11287
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4362
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19845
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/13-99498732-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498732
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498732
    reference: chr 13
allele count: 1
allele frequency: 8.873271930291576e-6
allele num: 112698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-418G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-77+42G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4134+42G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-487G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.473+42G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-487G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1106G>T
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12198
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

13-99498742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498742
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498742
    reference: chr 13
allele count: 1
allele frequency: 8.871854927428227e-6
allele num: 112716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.473+32C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1116C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4134+32C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-77+32C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-428C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-497C>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-497C>T
  variant of: http://identifiers.org/hgnc/14132
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19838
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ

13-99498783-AAGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498783
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498780
    reference: chr 13
allele count: 6
allele frequency: 5.323112956456936e-5
allele num: 112716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1160_318-1158delCCT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-541_4062-539delCCT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.461_463delCCT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-472_83-470delCCT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4122_4124delCCT
  hgvsp: ENSP00000401958.2:p.Leu1375del
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-541_4065-539delCCT
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-89_-87delCCT
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4782
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu1375del
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: AAGG
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

13-99498786-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498786
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498786
    reference: chr 13
allele count: 1
allele frequency: 8.872169777840869e-6
allele num: 112712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.461C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-541C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-89C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-541C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1160C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-472C>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4122C>G
  hgvsp: ENST00000448493.2:c.4122C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19838
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5619
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu1374Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/13-99498797-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498797
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498797
    reference: chr 13
allele count: 2
allele frequency: 1.77430801987225e-5
allele num: 112720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-483G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-552G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-552G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1171G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4111G>T
  hgvsp: ENSP00000401958.2:p.Val1371Leu
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-100G>T
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.450G>T
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4774
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val1371Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99498812-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99498812
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99498812
    reference: chr 13
allele count: 1
allele frequency: 8.87342940299567e-6
allele num: 112696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000088387
  ensembl transcript: ENST00000472874
  gene symbol: DOCK9
  hgvsc: ENST00000472874.1:n.437-2A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000401958
  ensembl transcript: ENST00000448493
  gene symbol: DOCK9
  hgvsc: ENST00000448493.2:c.4098-2A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000344702
  ensembl transcript: ENST00000340449
  gene symbol: DOCK9
  hgvsc: ENST00000340449.3:c.-115A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000403528
  ensembl transcript: ENST00000449796
  gene symbol: DOCK9
  hgvsc: ENST00000449796.1:c.318-1186A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000396897
  ensembl transcript: ENST00000450257
  gene symbol: DOCK9
  hgvsc: ENST00000450257.1:c.83-498A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000341086
  ensembl transcript: ENST00000339416
  gene symbol: DOCK9
  hgvsc: ENST00000339416.2:c.4065-567A>G
  variant of: http://identifiers.org/hgnc/14132
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088387
  ensembl protein: ENSP00000365643
  ensembl transcript: ENST00000376460
  gene symbol: DOCK9
  hgvsc: ENST00000376460.1:c.4062-567A>G
  variant of: http://identifiers.org/hgnc/14132
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3709
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
hgvs: c.4098-2A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3662
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47177
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.522704339051463e-4
allele num: 15856
num of homozygotes: 1

African
type: Population
allele count: 1
allele frequency: 1.03950103950104e-4
allele num: 9620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66104
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 1.535285e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.675e1

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 385
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520588771972508e-5
allele num: 65764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.525107e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.514e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.623e1

GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 408
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.392227051904884e-5
allele num: 15644
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 6.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 1.519685e6

GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 698
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543257507947776e-5
allele num: 64798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.358e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.25e0

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

FS
type: SiteQuality
SIO_000300: 2.133e0

DP
type: SiteQuality
SIO_000300: 1.495135e6

GenotypeQuality
all individuals: 3563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572524845892565e-5
allele num: 63592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.505e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.458722e6

QD
type: SiteQuality
SIO_000300: 1.42e1

GenotypeQuality
all individuals: 3605
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 38754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5990
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575944778894947e-5
allele num: 63454
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.230012300123001e-4
allele num: 8130
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.332977872567315e-4
allele num: 15004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10714
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.387e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.456172e6

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5990
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 38754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 41
allele frequency: 2.732604638762997e-3
allele num: 15004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63454
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

DP
type: SiteQuality
SIO_000300: 1.456172e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.6e-1

GenotypeQuality
all individuals: 143
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37650
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.185322036057845e-5
allele num: 62788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.46073793755913e-5
allele num: 10570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

DP
type: SiteQuality
SIO_000300: 1.435418e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.29e0

FS
type: SiteQuality
SIO_000300: 2.1171e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

GenotypeQuality
all individuals: 515
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 405
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.918666931164451e-5
allele num: 10082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.829e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.793e1

FS
type: SiteQuality
SIO_000300: 3.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.363218e6

GenotypeQuality
all individuals: 772
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5413
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 662
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 266
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 404
bin: 9.25e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5804
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 7.727975270479134e-4
allele num: 9058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.752049898381106e-5
allele num: 57076
num of homozygotes: 0

African
type: Population
allele count: 308
allele frequency: 3.629507423992458e-2
allele num: 8486
num of homozygotes: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7036
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.178332849259367e-4
allele num: 13772
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.31578947368421e-3
allele num: 760
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.184061e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.028e1

QD
type: SiteQuality
SIO_000300: 1.601e1

GenotypeQuality
all individuals: 1649
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5038
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.87729969212285e-5
allele num: 53268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12986
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.237e-1

DP
type: SiteQuality
SIO_000300: 1.069686e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.368e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.708e1

GenotypeQuality
all individuals: 2734
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.33155792276964e-4
allele num: 7510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5204
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.176e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.097e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.039639e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.3e0

GenotypeQuality
all individuals: 2026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 838
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
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variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 502
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.342539517109606e-5
allele num: 46056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

DP
type: SiteQuality
SIO_000300: 1.006223e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.23e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e0

GenotypeQuality
all individuals: 251
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 499
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variant carriers: 0

GenotypeQuality
all individuals: 769
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variant carriers: 0

GenotypeQuality
all individuals: 2395
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variant carriers: 1

GenotypeQuality
all individuals: 746
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.155079522434378e-5
allele num: 46402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.278e0

VQSLOD
type: SiteQuality
SIO_000300: -1.228e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 1.030477e6

GenotypeQuality
all individuals: 4061
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6373
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.144726118474671e-5
allele num: 46626
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.049004e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

QD
type: SiteQuality
SIO_000300: 1.053e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

GenotypeQuality
all individuals: 2398
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1326
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.424808326551591e-5
allele num: 46694
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e0

FS
type: SiteQuality
SIO_000300: 3.779e0

QD
type: SiteQuality
SIO_000300: 1.118e1

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.093e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 1.053876e6

GenotypeQuality
all individuals: 3134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 750
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variant carriers: 0

GenotypeQuality
all individuals: 906
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variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47774
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.176614881439084e-5
allele num: 12230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5408
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.112558e6

FS
type: SiteQuality
SIO_000300: 2.68e0

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

QD
type: SiteQuality
SIO_000300: 2.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.484e0

VQSLOD
type: SiteQuality
SIO_000300: -4.031e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

GenotypeQuality
all individuals: 2923
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.164410944071961e-5
allele num: 48026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.369196757553427e-4
allele num: 5428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6842
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.206e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

DP
type: SiteQuality
SIO_000300: 1.122051e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.95e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.849e0

GenotypeQuality
all individuals: 3536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 798
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variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.040566461249643e-5
allele num: 49006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.159e-1

FS
type: SiteQuality
SIO_000300: 6.245e0

QD
type: SiteQuality
SIO_000300: 7.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

DP
type: SiteQuality
SIO_000300: 1.165896e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 913
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variant carriers: 0

GenotypeQuality
all individuals: 883
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variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6766
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.012558364192562e-5
allele num: 49688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

DP
type: SiteQuality
SIO_000300: 1.184479e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

QD
type: SiteQuality
SIO_000300: 1.334e1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 19838
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5618
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 2793
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variant carriers: 0

GenotypeQuality
all individuals: 3708
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 4780
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.220107369448512e-4
allele num: 8196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.657e0

DP
type: SiteQuality
SIO_000300: 2.2327e6

QD
type: SiteQuality
SIO_000300: 8.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.629999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.962e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -5.788e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 1502
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2397
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2732
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
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variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.905342580595991e-5
allele num: 52484
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.772e0

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

DP
type: SiteQuality
SIO_000300: 1.259963e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.277e1

MQ
type: SiteQuality
SIO_000300: 5.801e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 2395
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7236
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.727975270479135e-5
allele num: 12940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.449e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.73e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.933e1

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5772
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.384274640088594e-4
allele num: 7224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 5.346e0

DP
type: SiteQuality
SIO_000300: 1.245255e6

VQSLOD
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.94e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.533e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7132
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.966568338249754e-5
allele num: 50850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6954
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Other
type: Population
allele count: 0
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allele num: 718
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.73e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 906
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.024954719259409e-5
allele num: 49690
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.541e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.629e0

DP
type: SiteQuality
SIO_000300: 1.059153e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.174e1

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

GenotypeQuality
all individuals: 1041
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 480
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.491646778042959e-4
allele num: 6704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

DP
type: SiteQuality
SIO_000300: 1.03099e6

VQSLOD
type: SiteQuality
SIO_000300: -1.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 7.41e0

MQRankSum
type: SiteQuality
SIO_000300: -1.309e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7170
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11666
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.501501501501501e-4
allele num: 6660
num of homozygotes: 0

European (Non-Finnish)
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allele count: 19
allele frequency: 4.19852388739117e-4
allele num: 45254
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5220
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.803e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.454e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.7165613842351e-5
allele num: 58256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.312e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.219659e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.417297136923305e-5
allele num: 13482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.099e0

DP
type: SiteQuality
SIO_000300: 1.238384e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

FS
type: SiteQuality
SIO_000300: 2.447e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.37e0

VQSLOD
type: SiteQuality
SIO_000300: -3.141e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.419498441905327e-5
allele num: 13478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.241539e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.059e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.828e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.703403399993186e-5
allele num: 58706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 7.39863865048831e-5
allele num: 13516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

QD
type: SiteQuality
SIO_000300: 2.19e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.893e0

DP
type: SiteQuality
SIO_000300: 1.282252e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.25e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 1.300728407908429e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.686966496845373e-5
allele num: 59278
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9696
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Other
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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Latino
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 7.260055176419341e-5
allele num: 13774
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
type: Population
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allele num: 8716
num of homozygotes: 0

East Asian
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DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6048
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.161271841879118e-5
allele num: 13964
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

FS
type: SiteQuality
SIO_000300: 6.99e-1

MQ
type: SiteQuality
SIO_000300: 5.879e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.415924e6

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.304474258145529e-5
allele num: 60524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

FS
type: SiteQuality
SIO_000300: 7.268e0

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 1.235e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 1.426833e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8806
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.647066574430938e-5
allele num: 60714
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 6.09e1

QD
type: SiteQuality
SIO_000300: 1.105e1

VQSLOD
type: SiteQuality
SIO_000300: 4.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

DP
type: SiteQuality
SIO_000300: 1.439076e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7480
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61082
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.125619090499775e-4
allele num: 8884
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.341e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.682e0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.465624e6

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.386e0

GenotypeQuality
all individuals: 407
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
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variant carriers: 0

GenotypeQuality
all individuals: 4033
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 3
allele frequency: 2.945797329143755e-4
allele num: 10184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60968
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.243e1

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 1.46553e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.03e-1

FS
type: SiteQuality
SIO_000300: 3.418e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4034
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1011
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variant carriers: 0

GenotypeQuality
all individuals: 8658
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.308519437551696e-5
allele num: 60450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.922e1

FS
type: SiteQuality
SIO_000300: 7.906e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.509e-1

DP
type: SiteQuality
SIO_000300: 1.462491e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.008e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

GenotypeQuality
all individuals: 896
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 4035
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 94
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.709608158883521e-5
allele num: 59616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

DP
type: SiteQuality
SIO_000300: 1.4483e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.146263182026593e-4
allele num: 8724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.347799716962059e-4
allele num: 59356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.434e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e0

MQRankSum
type: SiteQuality
SIO_000300: -6.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.327e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

DP
type: SiteQuality
SIO_000300: 1.444643e6

GenotypeQuality
all individuals: 1068
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 949
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GenotypeQuality
all individuals: 33546
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.726340503400891e-5
allele num: 57926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.76e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.41614e6

FS
type: SiteQuality
SIO_000300: 8.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 598
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variant carriers: 0

GenotypeQuality
all individuals: 400
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GenotypeQuality
all individuals: 1112
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GenotypeQuality
all individuals: 359
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GenotypeQuality
all individuals: 729
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GenotypeQuality
all individuals: 290
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GenotypeQuality
all individuals: 255
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GenotypeQuality
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GenotypeQuality
all individuals: 2708
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GenotypeQuality
all individuals: 606
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.333528894103843e-5
allele num: 13636
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.76e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.41614e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 8.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

GenotypeQuality
all individuals: 532
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.737740242588538e-5
allele num: 57546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 5.17e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

DP
type: SiteQuality
SIO_000300: 1.406274e6

GenotypeQuality
all individuals: 750
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32833
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13148
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.390983000739098e-5
allele num: 13530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.400283e6

QD
type: SiteQuality
SIO_000300: 7.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 1.918e0

MQ
type: SiteQuality
SIO_000300: 5.86e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.305e0

VQSLOD
type: SiteQuality
SIO_000300: -2.629e0

GenotypeQuality
all individuals: 205
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4031
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2307
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19163
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7096
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.231527093596059e-4
allele num: 8120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.734e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

QD
type: SiteQuality
SIO_000300: 7.63e0

VQSLOD
type: SiteQuality
SIO_000300: -2.867e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.308134e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

GenotypeQuality
all individuals: 4034
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26697
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18101
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.287061647946498e-5
allele num: 46652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.066969822240595e-4
allele num: 4838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7032
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.198065256599443e-5
allele num: 12198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.88e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.477e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.913e1

DP
type: SiteQuality
SIO_000300: 1.182422e6

GenotypeQuality
all individuals: 1057
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
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variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.327131112072696e-5
allele num: 46220
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.604106512672441e-4
allele num: 6234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.172778e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

FS
type: SiteQuality
SIO_000300: 7.354e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

GenotypeQuality
all individuals: 4029
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27870
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
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variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.097315436241611e-4
allele num: 4768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45710
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

MQ
type: SiteQuality
SIO_000300: 5.635e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.813e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -1.236e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.813e0

DP
type: SiteQuality
SIO_000300: 1.163218e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

QD
type: SiteQuality
SIO_000300: 7.64e0

GenotypeQuality
all individuals: 401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4033
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 633
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variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.383253412025083e-4
allele num: 43376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.94e-1

FS
type: SiteQuality
SIO_000300: 6.468e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.114986e6

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-1

QD
type: SiteQuality
SIO_000300: 1.282e1

GenotypeQuality
all individuals: 32410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7408
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1481
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.151196407701298e-5
allele num: 32514
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

MQRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.857e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e0

DP
type: SiteQuality
SIO_000300: 9.53386e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.811e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

QD
type: SiteQuality
SIO_000300: 3.137e1

GenotypeQuality
all individuals: 233
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4029
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31806
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
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GenotypeQuality
all individuals: 6867
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variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 8.625646923519264e-4
allele num: 3478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.370180641682394e-5
allele num: 29672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.577e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

FS
type: SiteQuality
SIO_000300: 5.48e-1

DP
type: SiteQuality
SIO_000300: 9.17244e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

GenotypeQuality
all individuals: 311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
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variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2914
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.055743243243243e-4
allele num: 9472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24860
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.608e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.43e-2

DP
type: SiteQuality
SIO_000300: 8.62549e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 1.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.73134328358209e-4
allele num: 2680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2946
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23240
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.43672e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.009e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 2.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.75e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.844e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.538071065989848e-4
allele num: 3940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19028
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.419e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.09e-1

FS
type: SiteQuality
SIO_000300: 7.194e0

DP
type: SiteQuality
SIO_000300: 7.88204e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.71e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.278772378516624e-4
allele num: 15640
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1430
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.388915432393693e-4
allele num: 8372
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.28364e5

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.716e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.463e1

DP
type: SiteQuality
SIO_000300: 7.15808e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 7.10928e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.298e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-2

QD
type: SiteQuality
SIO_000300: 8.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.362685907819172e-5
allele num: 13582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.84839e5

QD
type: SiteQuality
SIO_000300: 1.739e1

ReadPosRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 2.088e0

ClippingRankSum
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SIO_000300: -1.273e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.58e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.415e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.25344697919278e-4
allele num: 7978
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 12366
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East Asian
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allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.369e0

FS
type: SiteQuality
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 530
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African
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allele count: 4
allele frequency: 1.460920379839299e-3
allele num: 2738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1824
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

BaseQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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QD
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MQ
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.62903593653276e-5
allele num: 61386
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8146
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.516e0

VQSLOD
type: SiteQuality
SIO_000300: -1.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

QD
type: SiteQuality
SIO_000300: 1.544e1

FS
type: SiteQuality
SIO_000300: 5.686e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.347e0

DP
type: SiteQuality
SIO_000300: 2.227537e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4808
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.169031462060457e-5
allele num: 16210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

DP
type: SiteQuality
SIO_000300: 2.228717e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

FS
type: SiteQuality
SIO_000300: 2.197e0

QD
type: SiteQuality
SIO_000300: 8.42e0

VQSLOD
type: SiteQuality
SIO_000300: 2.56e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16827041697508e-5
allele num: 16212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61398
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.231152e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.846e0

QD
type: SiteQuality
SIO_000300: 1.754e1

VQSLOD
type: SiteQuality
SIO_000300: -9.627e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.102e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 2797
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.1435877390143e-5
allele num: 61398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8146
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.813678829543451e-5
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: -2.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

FS
type: SiteQuality
SIO_000300: 1.835e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 2.233537e6

QD
type: SiteQuality
SIO_000300: 1.216e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.813678829543451e-5
allele num: 11346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.888e1

MQRankSum
type: SiteQuality
SIO_000300: 7.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -2.04e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.322e1

DP
type: SiteQuality
SIO_000300: 2.233588e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.455192732629511e-4
allele num: 8146
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 2.233158e6

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.313e1

FS
type: SiteQuality
SIO_000300: 7.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.885e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.628929793125916e-5
allele num: 61390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16204
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8194
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Other
type: Population
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QD
type: SiteQuality
SIO_000300: 1.105e1

ReadPosRankSum
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VQSLOD
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DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

ClippingRankSum
type: SiteQuality
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