14-96135887-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135887
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135887
    reference: chr 14
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.67G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1466-1G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3246G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1661-1G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1822-1G>A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1822-1G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3246G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1511-1G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2277-1G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1640G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1822-1G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-892G>A
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2277-1G>A
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2277-1G>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-96135898-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135898
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135898
    reference: chr 14
allele count: 10
allele frequency: 8.24334350012365e-5
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3257A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2287A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.78A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1832A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1651A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1832A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1521A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2287A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1832A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1671A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-881A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3257A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1476A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

14-96135899-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135899
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135899
    reference: chr 14
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1833G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1522G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1833G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.79G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1652G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1477G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-880G>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2288G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1672G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2288G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3258G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1833G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3258G>T
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

14-96135903-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135903
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135903
    reference: chr 14
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2292C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3262C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1676C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1837C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.83C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2292C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1526C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1656C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1481C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-876C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1837C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3262C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1837C>T
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

14-96135907-TCATACCTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135907
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135899
    reference: chr 14
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.91_98delACCTACAT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: TCATACCTA
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

14-96135923-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135923
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135923
    reference: chr 14
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1857G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2312G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1857G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3282G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2312G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1546G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1857G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.103G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1501G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1696G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-856G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1676G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3282G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

14-96135931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135931
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135931
    reference: chr 14
allele count: 18
allele frequency: 1.483630608947941e-4
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1509G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.111G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1704G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-848G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3290G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1865G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1865G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2320G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1684G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2320G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1554G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3290G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1865G>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/14-96135933-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135933
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135933
    reference: chr 14
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.113C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1511C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2322C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-846C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1867C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1556C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1706C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1686C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3292C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1867C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3292C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1867C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2322C>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

14-96135934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135934
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135934
    reference: chr 14
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.114C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1687C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1707C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1557C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3293C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2323C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1868C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1868C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3293C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-845C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1868C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1512C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2323C>T
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

14-96135935-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135935
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135935
    reference: chr 14
allele count: 4
allele frequency: 3.297174321606383e-5
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2324A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1869A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2324A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1708A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.115A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1558A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1513A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1688A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3294A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-844A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1869A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1869A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3294A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-96135948-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135948
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135948
    reference: chr 14
allele count: 2
allele frequency: 1.649783878311941e-5
allele num: 121228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1701A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1882A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1882A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2337A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1526A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3307A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.128A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-831A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2337A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3307A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1571A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1882A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1721A>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

14-96135955-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135955
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135955
    reference: chr 14
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-824G>C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+1G>C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+1G>C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+1G>C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+1G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1708G>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10755
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2343+1G>C
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

14-96135958-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135958
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135958
    reference: chr 14
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1711A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-821A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+4A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2343+4A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-96135960-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135960
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135960
    reference: chr 14
allele count: 2
allele frequency: 1.652974527662529e-5
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-819G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+6G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+6G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+6G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1713G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+6G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+6G>T
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2343+6G>T
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-96135963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135963
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135963
    reference: chr 14
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1716C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+9C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+9C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-816C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+9C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+9C>T
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

14-96135973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135973
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135973
    reference: chr 14
allele count: 1
allele frequency: 8.280750567231414e-6
allele num: 120762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+19A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+19A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1726A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+19A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-806A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+19A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+19A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

14-96135974-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135974
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135974
    reference: chr 14
allele count: 2
allele frequency: 1.656836105772417e-5
allele num: 120712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+20T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+20T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+20T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1727T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+20T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-805T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+20T>G
  variant of: http://identifiers.org/hgnc/13463
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/14-96135978-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135978
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135978
    reference: chr 14
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1731A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+24A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+24A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-801A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+24A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+24A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+24A>C
  variant of: http://identifiers.org/hgnc/13463
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-96135980-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135980
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135980
    reference: chr 14
allele count: 1
allele frequency: 8.289262089888757e-6
allele num: 120638
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-799A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+26A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+26A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1733A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+26A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+26A>C
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

14-96135987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135987
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135987
    reference: chr 14
allele count: 2
allele frequency: 1.661405549094534e-5
allele num: 120380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+33C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-792C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+33C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1740C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+33C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+33C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+33C>T
  variant of: http://identifiers.org/hgnc/13463
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16849
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-96135993-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135993
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135993
    reference: chr 14
allele count: 1
allele frequency: 8.324176738920521e-6
allele num: 120132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+39C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-786C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1746C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+39C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+39C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+39C>T
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

14-96135995-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135995
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135995
    reference: chr 14
allele count: 2
allele frequency: 1.666444474070124e-5
allele num: 120016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+41C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+41C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-784C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1748C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+41C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+41C>T
  variant of: http://identifiers.org/hgnc/13463
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

14-96135997-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96135997
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96135997
    reference: chr 14
allele count: 25
allele frequency: 2.082986168971838e-4
allele num: 120020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-782T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+43T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1750T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+43T>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+43T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+43T>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13952
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

14-96136001-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136001
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136001
    reference: chr 14
allele count: 3
allele frequency: 2.502544253324213e-5
allele num: 119878
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1577+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1888+47A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1888+47A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1727+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1888+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1532+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.134+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2343+47A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2343+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.1754A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+47A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-778A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3313+47A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

14-96136738-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136738
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136738
    reference: chr 14
allele count: 1
allele frequency: 8.267742575567167e-6
allele num: 120952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1889-41G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-41G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+784G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1889-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3314-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1578-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1889-41G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.135-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000486671
  gene symbol: TCL6
  hgvsc: ENST00000486671.1:n.2491G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1728-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2344-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1533-41G>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2344-41G>T
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10675
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-96136775-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136775
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136775
    reference: chr 14
allele count: 17492
allele frequency: 1.441854330838472e-1
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3314-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.135-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1578-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2277-4C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1889-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1728-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2344-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1889-4C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1533-4C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1889-4C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2344-4C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+821C>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 4.75e1
  variant carriers: 1575
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.75e1
  variant carriers: 965
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 7.25e1
  variant carriers: 1072
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 6.75e1
  variant carriers: 1310
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 6.25e1
  variant carriers: 1645
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 5.25e1
  variant carriers: 1657
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 18034
  bin: 2.75e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 4.25e1
  variant carriers: 1371
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.25e1
  variant carriers: 598
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.25e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.75e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.75e1
  variant carriers: 747
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 286
genotype quality: GenotypeQuality
hgvs: n.2344-4C>A
num of homozygotes: 1501
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

14-96136776-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136776
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136774
    reference: chr 14
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.138_139delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1581_1582delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2347_2348delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1731_1732delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1892_1893delGA
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1892_1893delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1536_1537delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2347_2348delGA
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1892_1893delGA
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2280_2281delGA
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3317_3318delGA
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+828_3313+829delGA
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2347_2348delGA
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: CAG
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

14-96136787-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136787
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136787
    reference: chr 14
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1541C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3322C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1736C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1897C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.143C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.9C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1586C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+833C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2285C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2352C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1897C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2352C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1897C>G
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/14-96136788-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136788
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136788
    reference: chr 14
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1542A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1898A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+834A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1898A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.144A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2286A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1737A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1587A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2353A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.10A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3323A>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1898A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2353A>C
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

14-96136794-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136794
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136794
    reference: chr 14
allele count: 28897
allele frequency: 2.380979846085395e-1
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.150A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2359A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3329A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1548A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2292A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1593A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2359A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1743A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1904A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.16A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1904A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+840A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1904A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.25e1
  variant carriers: 1243
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 7.25e1
  variant carriers: 2143
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 8.75e1
  variant carriers: 1225
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 3.25e1
  variant carriers: 471
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 9.75e1
  variant carriers: 3860
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 5.25e1
  variant carriers: 1938
genotype depth: GenotypeDepth
  all individuals: 16472
  bin: 2.75e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 854
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 7.75e1
  variant carriers: 1778
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 6.75e1
  variant carriers: 2208
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 2.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.75e1
  variant carriers: 1701
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 6.25e1
  variant carriers: 2388
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 8.25e1
  variant carriers: 1528
genotype quality: GenotypeQuality
num of homozygotes: 4282
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum

14-96136805-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136805
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136805
    reference: chr 14
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2303A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.161A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1604A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3340A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1915A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1754A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2370A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1915A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2370A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1915A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1559A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.27A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+851A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

14-96136807-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136807
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136807
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1917A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1606A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2305A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.29A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1561A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1756A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1917A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2372A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3342A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.163A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3313+853A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2372A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1917A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

14-96136819-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136819
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136819
    reference: chr 14
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1929C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1929C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2384C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1573C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3354C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.175C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1768C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1929C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2384C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2317C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1618C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.41C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-849C>T
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

14-96136823-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136823
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136823
    reference: chr 14
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2321G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2388G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1577G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1933G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2388G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.179G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3358G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.45G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1772G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1622G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-845G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1933G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1933G>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

14-96136832-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136832
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136832
    reference: chr 14
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1942C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1942C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2330C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.54C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1942C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1631C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.188C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1586C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3367C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2397C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1781C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2397C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-836C>T
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

14-96136840-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136840
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136840
    reference: chr 14
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2405G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1950G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1639G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3375G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1594G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1950G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2405G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-828G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1950G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.196G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1789G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.62G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2338G>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

14-96136844-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136844
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136844
    reference: chr 14
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1643C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1954C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-824C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1793C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2409C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.200C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3379C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2342C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1954C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2409C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1598C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.66C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1954C>T
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

14-96136845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136845
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136845
    reference: chr 14
allele count: 5
allele frequency: 4.119566292060772e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1955G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.67G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3380G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1955G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-823G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1599G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2343G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1794G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2410G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1644G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.201G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1955G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2410G>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

14-96136851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136851
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136851
    reference: chr 14
allele count: 16
allele frequency: 1.318304660206974e-4
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.73C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.207C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1605C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2416C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1800C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1961C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1961C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2349C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1650C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1961C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3386C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2416C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-817C>T
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28325
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

14-96136852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136852
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136852
    reference: chr 14
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1962G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1962G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1962G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1801G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3387G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1651G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.74G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2417G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-816G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2417G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1606G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.208G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2350G>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12067
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-96136855-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136855
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136854
    reference: chr 14
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-807delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.217delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1971delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1660delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2359delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1971delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1810delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1971delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1615delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3396delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.83delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2426delT
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2426delT
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: CT
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-96136862-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136862
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136862
    reference: chr 14
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-806C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1811C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1616C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2427C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.218C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2360C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1972C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1972C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1661C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3397C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2427C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.84C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1972C>G
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11998
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

14-96136870-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136870
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136870
    reference: chr 14
allele count: 2
allele frequency: 1.648342591524222e-5
allele num: 121334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1980C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.92C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3405C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1669C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1819C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1624C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.226C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2368C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-798C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2435C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1980C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1980C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2435C>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-96136878-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136878
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136878
    reference: chr 14
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2443T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-790T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1988T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2443T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1632T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2376T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.100T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3413T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1988T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.234T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1988T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1677T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1827T>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

14-96136884-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136884
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136884
    reference: chr 14
allele count: 2
allele frequency: 1.649076517150396e-5
allele num: 121280
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1994T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.240T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1833T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2449T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2449T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1994T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3419T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1994T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2382T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1683T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1638T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.106T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-784T>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

14-96136884-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136884
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136884
    reference: chr 14
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1994T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1638T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1683T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.240T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2449T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.106T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2382T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1833T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3419T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1994T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-784T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1994T>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2449T>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

14-96136886-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136886
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136886
    reference: chr 14
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.242C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2451C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1835C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2384C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.1996C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1685C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1640C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.108C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3421C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.1996C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.1996C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2451C>T
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-782C>T
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12935
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

14-96136894-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136894
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136894
    reference: chr 14
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2004G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1843G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2392G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3429G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.116G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1648G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1693G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2459G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.250G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-774G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2004G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2459G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2004G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

14-96136900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136900
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136900
    reference: chr 14
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.256G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1654G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2010G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.122G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2465G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2010G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2010G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1849G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2398G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3435G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1699G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2465G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-768G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

14-96136906-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136906
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136906
    reference: chr 14
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2471A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.262A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2016A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2016A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2016A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-762A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2404A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3441A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1660A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2471A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1705A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1855A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.128A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

14-96136918-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136918
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136918
    reference: chr 14
allele count: 21
allele frequency: 1.74028341758515e-4
allele num: 120670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-750A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+4A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+4A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12869
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2479+4A>G
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS

14-96136919-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136919
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136919
    reference: chr 14
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-749G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+5G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+5G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+5G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+5G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+5G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+5G>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27191
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2479+5G>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-96136925-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136925
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136926
    reference: chr 14
allele count: 2
allele frequency: 1.662344570782632e-5
allele num: 120312
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-737dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+17dupG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+17dupG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+17dupG
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+17dupG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+17dupG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+17dupG
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10897
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-96136925-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136925
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136924
    reference: chr 14
allele count: 1
allele frequency: 8.311722853913159e-6
allele num: 120312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+17delG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-737delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+17delG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+17delG
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+17delG
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+17delG
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: AG
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

14-96136927-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136927
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136927
    reference: chr 14
allele count: 2
allele frequency: 1.664364296057121e-5
allele num: 120166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+13G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+13G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+13G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+13G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-741G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+13G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+13G>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

14-96136928-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136928
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136928
    reference: chr 14
allele count: 1
allele frequency: 8.320436656515735e-6
allele num: 120186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-740G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+14G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+14G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+14G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+14G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+14G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+14G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

14-96136930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136930
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136930
    reference: chr 14
allele count: 2
allele frequency: 1.665889251682548e-5
allele num: 120056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+16G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-738G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+16G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+16G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+16G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+16G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+16G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10364
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

14-96136931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136931
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136931
    reference: chr 14
allele count: 1
allele frequency: 8.338197281747686e-6
allele num: 119930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+17G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+17G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+17G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-737G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+17G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+17G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+17G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

14-96136944-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136944
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136944
    reference: chr 14
allele count: 1
allele frequency: 8.393063971933595e-6
allele num: 119146
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+30T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-724T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+30T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+30T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+30T>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+30T>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+30T>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20368
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-96136945-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136945
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136945
    reference: chr 14
allele count: 1
allele frequency: 8.392500461587526e-6
allele num: 119154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+31A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+31A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-723A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+31A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+31A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+31A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+31A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

14-96136947-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136947
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136947
    reference: chr 14
allele count: 1
allele frequency: 8.418925745074929e-6
allele num: 118780
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+33C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+33C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+33C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+33C>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+33C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-721C>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9583
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

14-96136950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136950
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136950
    reference: chr 14
allele count: 2
allele frequency: 1.684182161142549e-5
allele num: 118752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+36G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+36G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+36G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+36G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+36G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-718G>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16973
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

14-96136950-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136950
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136950
    reference: chr 14
allele count: 1
allele frequency: 8.420910805712745e-6
allele num: 118752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+36G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+36G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-718G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+36G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+36G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+36G>C
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+36G>C
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16973
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

14-96136955-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96136955
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96136955
    reference: chr 14
allele count: 1
allele frequency: 8.461955050094773e-6
allele num: 118176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2024+41G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3449+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2412+41G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1863+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2479+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2024+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1713+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-713G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.270+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2479+41G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.136+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1668+41G>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2024+41G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-96137619-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96137619
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96137619
    reference: chr 14
allele count: 1
allele frequency: 8.454943605526151e-6
allele num: 118274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.271-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2025-49A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2025-49A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3450-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2480-49A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1669-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1714-53A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.137-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1864-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2413-49A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2480-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2025-49A>G
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-49A>G
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19386
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-96137630-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 96137630
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 96137630
    reference: chr 14
allele count: 6217
allele frequency: 5.240929322902617e-2
allele num: 118624
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000467865
  gene symbol: TCL6
  hgvsc: ENST00000467865.1:n.2025-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000553913
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000553913.2:n.2025-38C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000495847
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000495847.1:n.2413-38C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000461160
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000461160.1:n.2480-38C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000459662
  gene symbol: TCL6
  hgvsc: ENST00000459662.1:n.1669-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000465501
  gene symbol: TCL6
  hgvsc: ENST00000465501.1:n.271-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000357168
  gene symbol: TCL6
  hgvsc: ENST00000357168.2:n.1714-42C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000483087
  gene symbol: TCL6
  hgvsc: ENST00000483087.1:n.1864-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000484207
  gene symbol: TCL6
  hgvsc: ENST00000484207.1:n.3450-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000497248
  gene symbol: TCL6
  hgvsc: ENST00000497248.1:n.3314-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000495696
  gene symbol: TCL6
  hgvsc: ENST00000495696.1:n.137-38C>A
  variant of: http://identifiers.org/hgnc/13463
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259084
  ensembl transcript: ENST00000488933
  gene symbol: RP11-1070N10.6
  hgvsc: ENST00000488933.1:n.2025-38C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187621
  ensembl transcript: ENST00000352367
  gene symbol: TCL6
  hgvsc: ENST00000352367.6:n.2480-38C>A
  variant of: http://identifiers.org/hgnc/13463
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17833
  bin: 2.75e1
  variant carriers: 1210
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 406
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 1.75e1
  variant carriers: 747
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 1.25e1
  variant carriers: 248
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25842
  bin: 2.25e1
  variant carriers: 1155
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 7.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 3.75e1
  variant carriers: 668
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 3.25e1
  variant carriers: 939
genotype quality: GenotypeQuality
num of homozygotes: 221
population: South Asian
population: Latino
population: Other
reference allele: C

GenotypeDepth
all individuals: 428
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 292
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9226
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7995
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

FS
type: SiteQuality
SIO_000300: 1.412e0

VQSLOD
type: SiteQuality
SIO_000300: 2.66e-1

DP
type: SiteQuality
SIO_000300: 1.956597e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

QD
type: SiteQuality
SIO_000300: 7.9e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.975e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 91
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 913
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9229
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7996
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592912705272256e-4
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.000360014400577e-5
allele num: 66664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

DP
type: SiteQuality
SIO_000300: 1.958281e6

FS
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeDepth
all individuals: 12791
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9220
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

DP
type: SiteQuality
SIO_000300: 1.958136e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 9.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -2.324e0

FS
type: SiteQuality
SIO_000300: 1.5535e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeDepth
all individuals: 91
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8004
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9220
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.958512e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.175e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -2.601e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

QD
type: SiteQuality
SIO_000300: 7.89e0

GenotypeQuality
all individuals: 27869
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9220
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.958683e6

QD
type: SiteQuality
SIO_000300: 3.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

MQRankSum
type: SiteQuality
SIO_000300: -5.159e0

FS
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.327e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.377e0

GenotypeDepth
all individuals: 2092
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8003
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9219
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

FS
type: SiteQuality
SIO_000300: 9.02e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.773e0

DP
type: SiteQuality
SIO_000300: 1.959203e6

QD
type: SiteQuality
SIO_000300: 1.644e1

GenotypeDepth
all individuals: 12789
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 92
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9229
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 27852
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7998
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3521
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Latino
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Other
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Other
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Latino
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European (Finnish)
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African
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East Asian
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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DP
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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QD
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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Other
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European (Finnish)
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African
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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FS
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele num: 66524
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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VQSLOD
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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African
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South Asian
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East Asian
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
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FS
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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African
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Other
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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FS
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MQ
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BaseQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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Other
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African
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East Asian
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Latino
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European (Non-Finnish)
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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VQSLOD
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MQ
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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African
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East Asian
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Latino
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European (Non-Finnish)
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ClippingRankSum
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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FS
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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FS
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.279829188646068e-5
allele num: 15924
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
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SIO_000300: 1.06e-1

BaseQRankSum
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SIO_000300: -2.782e0

VQSLOD
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SIO_000300: -2.121e-1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: -8.8e-1

QD
type: SiteQuality
SIO_000300: 9.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

DP
type: SiteQuality
SIO_000300: 1.840743e6

GenotypeDepth
all individuals: 2079
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 15710
bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3126
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.325040688212044e-4
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.296e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
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SIO_000300: 5.17e-1

FS
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QD
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SIO_000300: 1.25e1

DP
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InbreedingCoeff
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SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

GenotypeDepth
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bin: 5.75e1
variant carriers: 1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 23

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 489
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variant carriers: 0

GenotypeQuality
all individuals: 1753
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 24
allele frequency: 2.078641953923437e-3
allele num: 11546
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15914
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

FS
type: SiteQuality
SIO_000300: 5.081e0

MQRankSum
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SIO_000300: -9.1e-2

QD
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SIO_000300: 1.612e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

InbreedingCoeff
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SIO_000300: 1.32e-2

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 1.820235e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeDepth
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bin: 5.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2092
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variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.545041359876375e-5
allele num: 66006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.807063e6

QD
type: SiteQuality
SIO_000300: 1.162e1

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

GenotypeDepth
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bin: 2.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 432
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3780
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GenotypeQuality
all individuals: 1993
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.405e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -3.34e0

DP
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SIO_000300: 1.956632e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

GenotypeDepth
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bin: 8.25e1
variant carriers: 569

GenotypeDepth
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bin: 5.75e1
variant carriers: 1766

GenotypeDepth
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variant carriers: 1574

GenotypeQuality
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variant carriers: 23

GenotypeQuality
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GenotypeQuality
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variant carriers: 37

GenotypeQuality
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GenotypeQuality
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variant carriers: 15757

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
all individuals: 2488
bin: 7.75e1
variant carriers: 16

GenotypeQuality
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bin: 3.75e1
variant carriers: 6

GenotypeQuality
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bin: 7.25e1
variant carriers: 14

GenotypeQuality
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bin: 2.25e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 38

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 17

East Asian
type: Population
allele count: 2591
allele frequency: 2.99676150821189e-1
allele num: 8646
num of homozygotes: 381

European (Non-Finnish)
type: Population
allele count: 8673
allele frequency: 1.300728876091065e-1
allele num: 66678
num of homozygotes: 593

Other
type: Population
allele count: 131
allele frequency: 1.44273127753304e-1
allele num: 908
num of homozygotes: 16

South Asian
type: Population
allele count: 1957
allele frequency: 1.186204388410717e-1
allele num: 16498
num of homozygotes: 132

European (Finnish)
type: Population
allele count: 1155
allele frequency: 1.746295736316903e-1
allele num: 6614
num of homozygotes: 99

African
type: Population
allele count: 2232
allele frequency: 2.146153846153846e-1
allele num: 10400
num of homozygotes: 254

Latino
type: Population
allele count: 753
allele frequency: 6.507086069823713e-2
allele num: 11572
num of homozygotes: 26

DP
type: SiteQuality
SIO_000300: 2.456378e6

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

FS
type: SiteQuality
SIO_000300: 2.032e0

ReadPosRankSum
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MQRankSum
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SIO_000300: 1.17e-1

MQ
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SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.351e1

BaseQRankSum
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SIO_000300: -2.894e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.96e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20514
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GenotypeQuality
all individuals: 957
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
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African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
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BaseQRankSum
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MQ
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VQSLOD
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FS
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QD
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 1
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GenotypeQuality
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GenotypeQuality
all individuals: 2189
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GenotypeQuality
all individuals: 5895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25093
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 1.2044e1

DP
type: SiteQuality
SIO_000300: 2.449306e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.371e0

QD
type: SiteQuality
SIO_000300: 1.288e1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 8670
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 455
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20519
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variant carriers: 1

GenotypeQuality
all individuals: 2192
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1920
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 1350
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 2.449297e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.72e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

GenotypeDepth
all individuals: 2527
bin: 3.75e1
variant carriers: 810

GenotypeDepth
all individuals: 2339
bin: 5.75e1
variant carriers: 2194

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1813
bin: 7.75e1
variant carriers: 19

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5082
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 415
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variant carriers: 35

GenotypeQuality
all individuals: 26
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variant carriers: 7

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2
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variant carriers: 1

GenotypeQuality
all individuals: 511
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variant carriers: 57

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 23721
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variant carriers: 17

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 26262
bin: 9.75e1
variant carriers: 24375

GenotypeQuality
all individuals: 1685
bin: 7.25e1
variant carriers: 25

Latino
type: Population
allele count: 1309
allele frequency: 1.131374243733794e-1
allele num: 11570
num of homozygotes: 87

Other
type: Population
allele count: 236
allele frequency: 2.599118942731278e-1
allele num: 908
num of homozygotes: 37

European (Non-Finnish)
type: Population
allele count: 13478
allele frequency: 2.020144488743667e-1
allele num: 66718
num of homozygotes: 1403

East Asian
type: Population
allele count: 2716
allele frequency: 3.143518518518518e-1
allele num: 8640
num of homozygotes: 423

African
type: Population
allele count: 5896
allele frequency: 5.665961945031712e-1
allele num: 10406
num of homozygotes: 1712

European (Finnish)
type: Population
allele count: 1808
allele frequency: 2.733595403689144e-1
allele num: 6614
num of homozygotes: 226

South Asian
type: Population
allele count: 3454
allele frequency: 2.092065414900061e-1
allele num: 16510
num of homozygotes: 394

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

QD
type: SiteQuality
SIO_000300: 1.738e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.28e-2

FS
type: SiteQuality
SIO_000300: 5.46e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 2.917968e6

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

GenotypeDepth
all individuals: 633
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 12166
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38973
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
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variant carriers: 0

GenotypeQuality
all individuals: 699
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 823
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variant carriers: 0

GenotypeQuality
all individuals: 8868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

DP
type: SiteQuality
SIO_000300: 1.822602e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeDepth
all individuals: 1515
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
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variant carriers: 0

GenotypeQuality
all individuals: 38981
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variant carriers: 0

GenotypeQuality
all individuals: 3344
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 8870
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1846
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 699
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 823
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.607e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

FS
type: SiteQuality
SIO_000300: 3.439e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.822376e6

MQRankSum
type: SiteQuality
SIO_000300: -1.424e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeDepth
all individuals: 111
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variant carriers: 0

GenotypeDepth
all individuals: 715
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variant carriers: 0

GenotypeQuality
all individuals: 3321
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 696
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GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.821576e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.83e-1

QD
type: SiteQuality
SIO_000300: 1.505e1

BaseQRankSum
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SIO_000300: -1.415e0

VQSLOD
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

FS
type: SiteQuality
SIO_000300: 6.411e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2925
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.032e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
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SIO_000300: 1.217e1

GenotypeDepth
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bin: 9.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 12
bin: 4.75e1
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GenotypeQuality
all individuals: 0
bin: 1.75e1
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GenotypeQuality
all individuals: 811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 8.25e1
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 691
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variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 5.994125756758376e-5
allele num: 66732
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East Asian
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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QD
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FS
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MQ
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele num: 10406
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Latino
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South Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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InbreedingCoeff
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DP
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QD
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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Other
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VQSLOD
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FS
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MQ
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66716
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

MQRankSum
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SIO_000300: -2.1e-1

FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Other
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Latino
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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East Asian
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Other
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African
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European (Non-Finnish)
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South Asian
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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African
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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QD
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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Other
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66702
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African
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Other
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66696
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European (Finnish)
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South Asian
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East Asian
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Latino
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DP
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SIO_000300: 1.812842e6

ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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SIO_000300: -7.44e-1

FS
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

Other
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African
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South Asian
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InbreedingCoeff
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SIO_000300: 1.0e-4

BaseQRankSum
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ClippingRankSum
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MQ
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QD
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Latino
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South Asian
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Other
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European (Non-Finnish)
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11554
num of homozygotes: 0

East Asian
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
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MQRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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Other
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African
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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MQ
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MQRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

FS
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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DP
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SIO_000300: 1.797732e6

MQ
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SIO_000300: 5.901e1

MQRankSum
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SIO_000300: 8.52e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 6.955312119631368e-4
allele num: 11502
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66400
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East Asian
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South Asian
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allele frequency: 7.306380905991232e-4
allele num: 16424
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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SIO_000300: 8.95e-1

ClippingRankSum
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SIO_000300: 1.96e-1

DP
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SIO_000300: 1.775114e6

FS
type: SiteQuality
SIO_000300: 1.497e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
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Other
type: Population
allele count: 0
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MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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QD
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DP
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ClippingRankSum
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SIO_000300: 1.46e0

ReadPosRankSum
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SIO_000300: -1.888e0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.021056765656627e-5
allele num: 66202
num of homozygotes: 0

African
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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FS
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MQ
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MQRankSum
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VQSLOD
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Other
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Latino
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ClippingRankSum
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DP
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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Other
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East Asian
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.511624391571182e-5
allele num: 66154
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ClippingRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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QD
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InbreedingCoeff
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DP
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MQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
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African
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European (Non-Finnish)
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allele frequency: 3.026084851419234e-5
allele num: 66092
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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BaseQRankSum
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SIO_000300: -5.69e-1

ReadPosRankSum
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DP
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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South Asian
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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VQSLOD
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QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 898
num of homozygotes: 0

East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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Other
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East Asian
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Latino
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European (Non-Finnish)
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allele count: 1
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allele num: 65668
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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DP
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Non-Finnish)
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African
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South Asian
type: Population
allele count: 1
allele frequency: 6.217358865953743e-5
allele num: 16084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.145e1

DP
type: SiteQuality
SIO_000300: 1.530297e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -7.435e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.879e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

FS
type: SiteQuality
SIO_000300: 1.332e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.447e0

GenotypeDepth
all individuals: 108
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 630
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17643
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5139
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5867
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1804
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2910
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1262
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6193
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4727
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535060788407221e-5
allele num: 65144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.483776e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.45e0

MQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.736e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

GenotypeDepth
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4944
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4369
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5294
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15560
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.136363636363636e-3
allele num: 880
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.348431e6

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.124e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 5.445e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.522e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

GenotypeDepth
all individuals: 69
bin: 6.25e1
variant carriers: 62

GenotypeDepth
all individuals: 8
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 991
bin: 7.25e1
variant carriers: 24

GenotypeQuality
all individuals: 817
bin: 7.75e1
variant carriers: 27

GenotypeQuality
all individuals: 633
bin: 5.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1785
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 461
bin: 5.75e1
variant carriers: 12

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 939
bin: 2.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1299
bin: 4.75e1
variant carriers: 16

GenotypeQuality
all individuals: 2132
bin: 3.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1560
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1087
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 37363
bin: 6.25e1
variant carriers: 27

GenotypeQuality
all individuals: 4794
bin: 6.75e1
variant carriers: 28

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 20

GenotypeQuality
all individuals: 324
bin: 8.25e1
variant carriers: 22

GenotypeQuality
all individuals: 5972
bin: 9.75e1
variant carriers: 5777

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 21

South Asian
type: Population
allele count: 1151
allele frequency: 7.314438230808337e-2
allele num: 15736
num of homozygotes: 62

Latino
type: Population
allele count: 280
allele frequency: 2.467395135706732e-2
allele num: 11348
num of homozygotes: 2

Other
type: Population
allele count: 68
allele frequency: 7.674943566591422e-2
allele num: 886
num of homozygotes: 4