13-99114131-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114131
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114131
    reference: chr 13
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.353C>T
  hgvsp: ENSP00000365737.4:p.Ser118Leu
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.893C>T
  hgvsp: ENSP00000442539.1:p.Ser298Leu
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.950C>T
  hgvsp: ENSP00000380651.2:p.Ser317Leu
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.986C>T
  hgvsp: ENSP00000365730.3:p.Ser329Leu
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.116C>T
  hgvsp: ENSP00000402810.1:p.Ser39Leu
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.702C>T
  hgvsp: ENSP00000402764.1:p.Ser235Leu
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33833
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser329Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

13-99114138-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114138
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114138
    reference: chr 13
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.979C>A
  hgvsp: ENSP00000365730.3:p.Gln327Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.886C>A
  hgvsp: ENSP00000442539.1:p.Gln296Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.109C>A
  hgvsp: ENSP00000402810.1:p.Gln37Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.346C>A
  hgvsp: ENSP00000365737.4:p.Gln116Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.943C>A
  hgvsp: ENSP00000380651.2:p.Gln315Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.695C>A
  hgvsp: ENSP00000402764.1:p.Gln233Lys
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln327Lys
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

13-99114144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114144
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114144
    reference: chr 13
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.340G>A
  hgvsp: ENSP00000365737.4:p.Asp114Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.973G>A
  hgvsp: ENSP00000365730.3:p.Asp325Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.880G>A
  hgvsp: ENSP00000442539.1:p.Asp294Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.937G>A
  hgvsp: ENSP00000380651.2:p.Asp313Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.689G>A
  hgvsp: ENSP00000402764.1:p.Asp231Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.103G>A
  hgvsp: ENSP00000402810.1:p.Asp35Asn
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33831
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4140
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp325Asn
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/13-99114157-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114157
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114157
    reference: chr 13
allele count: 3
allele frequency: 2.472024918011174e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-6G>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-6G>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-6G>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-6G>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-6G>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-6G>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3863
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33832
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: c.966-6G>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

13-99114157-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114157
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114157
    reference: chr 13
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-6G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-6G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-6G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-6G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-6G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-6G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1885
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
hgvs: c.966-6G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-99114159-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114159
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114159
    reference: chr 13
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-8G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7691
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3359
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
hgvs: c.966-8G>A
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

13-99114169-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114169
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114169
    reference: chr 13
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-18C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-18C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-18C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-18C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-18C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-18C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 77
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 3860
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

13-99114175-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114175
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114175
    reference: chr 13
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-24G>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-24G>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-24G>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-24G>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-24G>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-24G>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

13-99114187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114187
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114187
    reference: chr 13
allele count: 27
allele frequency: 2.22720823572112e-4
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-36G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-36G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-36G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-36G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-36G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-36G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3269
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

13-99114188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114188
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114188
    reference: chr 13
allele count: 4
allele frequency: 3.30016665841625e-5
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-37C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-37C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-37C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-37C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-37C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-37C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5869
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33783
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

13-99114196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114196
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114196
    reference: chr 13
allele count: 22
allele frequency: 1.816680429397192e-4
allele num: 121100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-45C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-45C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-45C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-45C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-45C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-45C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7620
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3520
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

13-99114200-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99114200
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99114200
    reference: chr 13
allele count: 3
allele frequency: 2.479912707072711e-5
allele num: 120972
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.966-49A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.682-49A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.333-49A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.930-49A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.873-49A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.96-49A>G
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

13-99115897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115897
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115897
    reference: chr 13
allele count: 1
allele frequency: 8.454943605526151e-6
allele num: 118274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+48C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+48C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+48C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+48C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+48C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+48C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11420
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2363
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 3108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5909
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

13-99115898-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115898
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115898
    reference: chr 13
allele count: 2
allele frequency: 1.696669437893415e-5
allele num: 117878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+47G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+47G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+47G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+47G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+47G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+47G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11465
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15719
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 978
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 1599
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genotype quality: GenotypeQuality
  all individuals: 118
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

13-99115899-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115899
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115899
    reference: chr 13
allele count: 2
allele frequency: 1.691761123329386e-5
allele num: 118220
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+46C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+46C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+46C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+46C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+46C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+46C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11501
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genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
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genotype quality: GenotypeQuality
  all individuals: 302
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
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genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

13-99115903-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115903
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115903
    reference: chr 13
allele count: 1
allele frequency: 8.451227963423086e-6
allele num: 118326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+42G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9635
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6008
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

13-99115910-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115910
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115910
    reference: chr 13
allele count: 2
allele frequency: 1.684153796924735e-5
allele num: 118754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+35T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+35T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+35T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+35T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+35T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+35T>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12192
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14792
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

13-99115914-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115914
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115914
    reference: chr 13
allele count: 1
allele frequency: 8.411136344520145e-6
allele num: 118890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+31T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+31T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+31T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+31T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+31T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+31T>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4496
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

13-99115917-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115917
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115917
    reference: chr 13
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+28A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+28A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+28A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+28A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+28A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+28A>G
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15828
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6301
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

13-99115917-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115917
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115917
    reference: chr 13
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+28A>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+28A>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+28A>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+28A>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+28A>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+28A>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15828
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3585
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

13-99115922-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115922
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115922
    reference: chr 13
allele count: 1
allele frequency: 8.397997917296517e-6
allele num: 119076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+23C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+23C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+23C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+23C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+23C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+23C>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15842
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99115923-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115923
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115923
    reference: chr 13
allele count: 1
allele frequency: 8.397151686148059e-6
allele num: 119088
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+22C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+22C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+22C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+22C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+22C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+22C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10575
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3611
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15847
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4579
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

13-99115923-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115923
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115923
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 119088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+22C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+22C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+22C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+22C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+22C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+22C>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4579
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

13-99115926-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115926
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115926
    reference: chr 13
allele count: 1
allele frequency: 8.393204861344255e-6
allele num: 119144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+19G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+19G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+19G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+19G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+19G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+19G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11661
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

13-99115927-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115927
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115927
    reference: chr 13
allele count: 96842
allele frequency: 8.030948866369231e-1
allele num: 120586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+18T>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.75e1
  variant carriers: 603
genotype depth: GenotypeDepth
  all individuals: 9123
  bin: 3.25e1
  variant carriers: 8452
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 1.25e1
  variant carriers: 820
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 5.25e1
  variant carriers: 3641
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 4.75e1
  variant carriers: 5364
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 320
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 3.75e1
  variant carriers: 8320
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 1.75e1
  variant carriers: 2395
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 966
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 9.75e1
  variant carriers: 1983
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 2.75e1
  variant carriers: 7040
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 6.25e1
  variant carriers: 1533
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 5.75e1
  variant carriers: 2353
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.25e1
  variant carriers: 761
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 8.25e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 4.25e1
  variant carriers: 7316
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.25e1
  variant carriers: 4574
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 3.75e1
  variant carriers: 350
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 6.75e1
  variant carriers: 1570
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 1207
genotype quality: GenotypeQuality
  all individuals: 43585
  bin: 9.75e1
  variant carriers: 42725
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 5.75e1
  variant carriers: 620
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 4.25e1
  variant carriers: 284
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 8.25e1
  variant carriers: 2159
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 7.75e1
  variant carriers: 1859
num of homozygotes: 39657
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

13-99115933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115933
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115933
    reference: chr 13
allele count: 2
allele frequency: 1.654834599281802e-5
allele num: 120858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+12C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+12C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+12C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+12C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+12C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+12C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10328
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4633
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-99115933-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115933
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115933
    reference: chr 13
allele count: 14
allele frequency: 1.158384219497261e-4
allele num: 120858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+12C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+12C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+12C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+12C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+12C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+12C>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10374
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10454
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10328
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

13-99115937-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115937
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115937
    reference: chr 13
allele count: 2
allele frequency: 1.654642928056125e-5
allele num: 120872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+8G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+8G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6036
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2637
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
hgvs: c.965+8G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff

13-99115938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115938
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115938
    reference: chr 13
allele count: 3
allele frequency: 2.48147167813658e-5
allele num: 120896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872+7C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965+7C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929+7C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332+7C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95+7C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681+7C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5643
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 3.25e1
  variant carriers: 0
hgvs: c.965+7C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

13-99115945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115945
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115945
    reference: chr 13
allele count: 4
allele frequency: 3.306386285109689e-5
allele num: 120978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.872C>T
  hgvsp: ENSP00000442539.1:p.Ala291Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.95C>T
  hgvsp: ENSP00000402810.1:p.Ala32Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.965C>T
  hgvsp: ENSP00000365730.3:p.Ala322Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.929C>T
  hgvsp: ENSP00000380651.2:p.Ala310Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.332C>T
  hgvsp: ENSP00000365737.4:p.Ala111Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.681C>T
  hgvsp: ENSP00000402764.1:p.Ala228Val
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10680
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4639
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3783
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala322Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

13-99115946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115946
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115946
    reference: chr 13
allele count: 3
allele frequency: 2.479953707530793e-5
allele num: 120970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.94G>A
  hgvsp: ENSP00000402810.1:p.Ala32Thr
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.871G>A
  hgvsp: ENSP00000442539.1:p.Ala291Thr
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.680G>A
  hgvsp: ENSP00000402764.1:p.Ala228Thr
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.964G>A
  hgvsp: ENSP00000365730.3:p.Ala322Thr
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.928G>A
  hgvsp: ENSP00000380651.2:p.Ala310Thr
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.331G>A
  hgvsp: ENSP00000365737.4:p.Ala111Thr
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20373
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4628
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5707
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala322Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

13-99115947-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115947
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115947
    reference: chr 13
allele count: 8
allele frequency: 6.611133148221606e-5
allele num: 121008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.330C>T
  hgvsp: ENST00000376554.4:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.927C>T
  hgvsp: ENST00000397517.2:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.963C>T
  hgvsp: ENST00000376547.3:c.963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.93C>T
  hgvsp: ENST00000418038.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.870C>T
  hgvsp: ENST00000539966.1:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.679C>T
  hgvsp: ENST00000444574.1:c.679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10826
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8979
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
hgvs: c.963C>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

13-99115950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115950
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115950
    reference: chr 13
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.676C>T
  hgvsp: ENST00000444574.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.327C>T
  hgvsp: ENST00000376554.4:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.867C>T
  hgvsp: ENST00000539966.1:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.960C>T
  hgvsp: ENST00000376547.3:c.960C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.90C>T
  hgvsp: ENST00000418038.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.924C>T
  hgvsp: ENST00000397517.2:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7262
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2665
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser320Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

13-99115958-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115958
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115958
    reference: chr 13
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.916G>A
  hgvsp: ENSP00000380651.2:p.Glu306Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.319G>A
  hgvsp: ENSP00000365737.4:p.Glu107Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.859G>A
  hgvsp: ENSP00000442539.1:p.Glu287Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.952G>A
  hgvsp: ENSP00000365730.3:p.Glu318Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.668G>A
  hgvsp: ENSP00000402764.1:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.82G>A
  hgvsp: ENSP00000402810.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu318Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

13-99115959-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115959
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115959
    reference: chr 13
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.951C>T
  hgvsp: ENST00000376547.3:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.858C>T
  hgvsp: ENST00000539966.1:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.667C>T
  hgvsp: ENST00000444574.1:c.667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.81C>T
  hgvsp: ENST00000418038.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.915C>T
  hgvsp: ENST00000397517.2:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.318C>T
  hgvsp: ENST00000376554.4:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3326
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3804
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4770
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser317Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

13-99115965-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115965
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115965
    reference: chr 13
allele count: 42
allele frequency: 3.467120143968036e-4
allele num: 121138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.312G>C
  hgvsp: ENST00000376554.4:c.312G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.75G>C
  hgvsp: ENST00000418038.1:c.75G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.909G>C
  hgvsp: ENST00000397517.2:c.909G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.945G>C
  hgvsp: ENST00000376547.3:c.945G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.661G>C
  hgvsp: ENST00000444574.1:c.661G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.852G>C
  hgvsp: ENST00000539966.1:c.852G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3807
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5843
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13874
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser315Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

13-99115965-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115965
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115965
    reference: chr 13
allele count: 2
allele frequency: 1.651009592365732e-5
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.909G>A
  hgvsp: ENST00000397517.2:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.945G>A
  hgvsp: ENST00000376547.3:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.661G>A
  hgvsp: ENST00000444574.1:c.661G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.852G>A
  hgvsp: ENST00000539966.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.312G>A
  hgvsp: ENST00000376554.4:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.75G>A
  hgvsp: ENST00000418038.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4801
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser315Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

13-99115971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115971
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115971
    reference: chr 13
allele count: 14
allele frequency: 1.154753460136261e-4
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.655C>T
  hgvsp: ENST00000444574.1:c.655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.846C>T
  hgvsp: ENST00000539966.1:c.846C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.939C>T
  hgvsp: ENST00000376547.3:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.903C>T
  hgvsp: ENST00000397517.2:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.69C>T
  hgvsp: ENST00000418038.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.306C>T
  hgvsp: ENST00000376554.4:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10930
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3822
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp313Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

13-99115978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115978
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115978
    reference: chr 13
allele count: 114
allele frequency: 9.399271144237587e-4
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.932G>A
  hgvsp: ENSP00000365730.3:p.Ser311Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.896G>A
  hgvsp: ENSP00000380651.2:p.Ser299Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.299G>A
  hgvsp: ENSP00000365737.4:p.Ser100Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.839G>A
  hgvsp: ENSP00000442539.1:p.Ser280Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.62G>A
  hgvsp: ENSP00000402810.1:p.Ser21Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.648G>A
  hgvsp: ENSP00000402764.1:p.Ser217Asn
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9069
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser311Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

13-99115985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115985
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115985
    reference: chr 13
allele count: 5
allele frequency: 4.122147473948028e-5
allele num: 121296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.889G>A
  hgvsp: ENSP00000380651.2:p.Glu297Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.925G>A
  hgvsp: ENSP00000365730.3:p.Glu309Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.641G>A
  hgvsp: ENSP00000402764.1:p.Glu215Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.292G>A
  hgvsp: ENSP00000365737.4:p.Glu98Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.832G>A
  hgvsp: ENSP00000442539.1:p.Glu278Lys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.55G>A
  hgvsp: ENSP00000402810.1:p.Glu19Lys
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11024
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4872
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5907
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20449
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Glu309Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99115986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115986
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115986
    reference: chr 13
allele count: 13
allele frequency: 1.071811361200429e-4
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.54C>T
  hgvsp: ENST00000418038.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.831C>T
  hgvsp: ENST00000539966.1:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.888C>T
  hgvsp: ENST00000397517.2:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.640C>T
  hgvsp: ENST00000444574.1:c.640C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.291C>T
  hgvsp: ENST00000376554.4:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.924C>T
  hgvsp: ENST00000376547.3:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20462
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14258
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala308Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/13-99115992-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115992
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115992
    reference: chr 13
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.48G>T
  hgvsp: ENSP00000402810.1:p.Trp16Cys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.634G>T
  hgvsp: ENSP00000402764.1:p.Trp212Cys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.825G>T
  hgvsp: ENSP00000442539.1:p.Trp275Cys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.285G>T
  hgvsp: ENSP00000365737.4:p.Trp95Cys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.882G>T
  hgvsp: ENSP00000380651.2:p.Trp294Cys
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.918G>T
  hgvsp: ENSP00000365730.3:p.Trp306Cys
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20466
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp306Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

13-99115994-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99115994
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99115994
    reference: chr 13
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.283T>C
  hgvsp: ENSP00000365737.4:p.Trp95Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.632T>C
  hgvsp: ENSP00000402764.1:p.Trp212Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.880T>C
  hgvsp: ENSP00000380651.2:p.Trp294Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.916T>C
  hgvsp: ENSP00000365730.3:p.Trp306Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.823T>C
  hgvsp: ENSP00000442539.1:p.Trp275Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.46T>C
  hgvsp: ENSP00000402810.1:p.Trp16Arg
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5912
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp306Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/13-99116004-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116004
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116004
    reference: chr 13
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.870G>T
  hgvsp: ENSP00000380651.2:p.Arg290Ser
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.36G>T
  hgvsp: ENSP00000402810.1:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.906G>T
  hgvsp: ENSP00000365730.3:p.Arg302Ser
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.813G>T
  hgvsp: ENSP00000442539.1:p.Arg271Ser
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.622G>T
  hgvsp: ENSP00000402764.1:p.Arg208Ser
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.273G>T
  hgvsp: ENSP00000365737.4:p.Arg91Ser
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg302Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

13-99116007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116007
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116007
    reference: chr 13
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.270C>T
  hgvsp: ENST00000376554.4:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.903C>T
  hgvsp: ENST00000376547.3:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.33C>T
  hgvsp: ENST00000418038.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.810C>T
  hgvsp: ENST00000539966.1:c.810C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.867C>T
  hgvsp: ENST00000397517.2:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.619C>T
  hgvsp: ENST00000444574.1:c.619C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4917
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20474
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14383
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp301Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99116009-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116009
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116009
    reference: chr 13
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.901G>A
  hgvsp: ENSP00000365730.3:p.Asp301Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.865G>A
  hgvsp: ENSP00000380651.2:p.Asp289Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.808G>A
  hgvsp: ENSP00000442539.1:p.Asp270Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.31G>A
  hgvsp: ENSP00000402810.1:p.Asp11Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.617G>A
  hgvsp: ENSP00000402764.1:p.Asp207Asn
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.268G>A
  hgvsp: ENSP00000365737.4:p.Asp90Asn
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp301Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

13-99116009-CGAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116009
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116006
    reference: chr 13
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.862_864delATC
  hgvsp: ENSP00000380651.2:p.Ile288del
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.898_900delATC
  hgvsp: ENSP00000365730.3:p.Ile300del
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.28_30delATC
  hgvsp: ENSP00000402810.1:p.Ile10del
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.614_616delATC
  hgvsp: ENSP00000402764.1:p.Ile206del
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.805_807delATC
  hgvsp: ENSP00000442539.1:p.Ile269del
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.265_267delATC
  hgvsp: ENSP00000365737.4:p.Ile89del
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3431
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14367
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile300del
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: CGAT
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

13-99116019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116019
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116019
    reference: chr 13
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.855C>T
  hgvsp: ENST00000397517.2:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.891C>T
  hgvsp: ENST00000376547.3:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.258C>T
  hgvsp: ENST00000376554.4:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.798C>T
  hgvsp: ENST00000539966.1:c.798C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.21C>T
  hgvsp: ENST00000418038.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.607C>T
  hgvsp: ENST00000444574.1:c.607C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3431
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr297Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

13-99116024-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116024
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116024
    reference: chr 13
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.602T>C
  hgvsp: ENST00000444574.1:c.602T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.253T>C
  hgvsp: ENST00000376554.4:c.253T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.16T>C
  hgvsp: ENST00000418038.1:c.16T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.793T>C
  hgvsp: ENST00000539966.1:c.793T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.850T>C
  hgvsp: ENST00000397517.2:c.850T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.886T>C
  hgvsp: ENST00000376547.3:c.886T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4845
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4916
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu296Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

13-99116035-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116035
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116035
    reference: chr 13
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.242A>G
  hgvsp: ENSP00000365737.4:p.Lys81Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.875A>G
  hgvsp: ENSP00000365730.3:p.Lys292Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.782A>G
  hgvsp: ENSP00000442539.1:p.Lys261Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.839A>G
  hgvsp: ENSP00000380651.2:p.Lys280Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402810
  ensembl transcript: ENST00000418038
  gene symbol: STK24
  hgvsc: ENST00000418038.1:c.5A>G
  hgvsp: ENSP00000402810.1:p.Lys2Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.591A>G
  hgvsp: ENSP00000402764.1:p.Lys198Arg
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4847
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5925
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys292Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

13-99116046-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116046
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116046
    reference: chr 13
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.864C>T
  hgvsp: ENST00000376547.3:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.828C>T
  hgvsp: ENST00000397517.2:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.580C>T
  hgvsp: ENST00000444574.1:c.580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.771C>T
  hgvsp: ENST00000539966.1:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.231C>T
  hgvsp: ENST00000376554.4:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20482
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg288Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

13-99116047-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116047
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116047
    reference: chr 13
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.579G>A
  hgvsp: ENSP00000402764.1:p.Arg194His
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.770G>A
  hgvsp: ENSP00000442539.1:p.Arg257His
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.827G>A
  hgvsp: ENSP00000380651.2:p.Arg276His
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.863G>A
  hgvsp: ENSP00000365730.3:p.Arg288His
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.230G>A
  hgvsp: ENSP00000365737.4:p.Arg77His
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20480
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg288His
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

13-99116054-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116054
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116054
    reference: chr 13
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.572A>G
  hgvsp: ENSP00000402764.1:p.Ile192Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.820A>G
  hgvsp: ENSP00000380651.2:p.Ile274Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.223A>G
  hgvsp: ENSP00000365737.4:p.Ile75Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.763A>G
  hgvsp: ENSP00000442539.1:p.Ile255Val
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.856A>G
  hgvsp: ENSP00000365730.3:p.Ile286Val
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4846
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20483
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14446
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile286Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

13-99116055-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116055
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116055
    reference: chr 13
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.819T>C
  hgvsp: ENST00000397517.2:c.819T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.222T>C
  hgvsp: ENST00000376554.4:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.855T>C
  hgvsp: ENST00000376547.3:c.855T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.571T>C
  hgvsp: ENST00000444574.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.762T>C
  hgvsp: ENST00000539966.1:c.762T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4917
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20483
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5923
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3851
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe285Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

13-99116059-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116059
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116059
    reference: chr 13
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.758A>G
  hgvsp: ENSP00000442539.1:p.Lys253Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.851A>G
  hgvsp: ENSP00000365730.3:p.Lys284Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.567A>G
  hgvsp: ENSP00000402764.1:p.Lys190Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.218A>G
  hgvsp: ENSP00000365737.4:p.Lys73Arg
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.815A>G
  hgvsp: ENSP00000380651.2:p.Lys272Arg
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4916
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20483
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys284Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

13-99116061-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116061
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116061
    reference: chr 13
allele count: 2
allele frequency: 1.648261084555794e-5
allele num: 121340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.813C>T
  hgvsp: ENST00000397517.2:c.813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.216C>T
  hgvsp: ENST00000376554.4:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.756C>T
  hgvsp: ENST00000539966.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.565C>T
  hgvsp: ENST00000444574.1:c.565C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.849C>T
  hgvsp: ENST00000376547.3:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11588
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5921
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4917
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4844
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3851
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20485
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His283His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

13-99116073-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116073
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116073
    reference: chr 13
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.801G>A
  hgvsp: ENST00000397517.2:c.801G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.204G>A
  hgvsp: ENST00000376554.4:c.204G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.837G>A
  hgvsp: ENST00000376547.3:c.837G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.744G>A
  hgvsp: ENST00000539966.1:c.744G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.553G>A
  hgvsp: ENST00000444574.1:c.553G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4911
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4843
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20485
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu279Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

13-99116081-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116081
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116081
    reference: chr 13
allele count: 1
allele frequency: 8.266102367411717e-6
allele num: 120976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.793G>C
  hgvsp: ENSP00000380651.2:p.Ala265Pro
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.545G>C
  hgvsp: ENSP00000402764.1:p.Ala183Pro
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.736G>C
  hgvsp: ENSP00000442539.1:p.Ala246Pro
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.196G>C
  hgvsp: ENSP00000365737.4:p.Ala66Pro
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.829G>C
  hgvsp: ENSP00000365730.3:p.Ala277Pro
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5889
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4842
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13918
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20486
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala277Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

13-99116082-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116082
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116082
    reference: chr 13
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.792T>C
  hgvsp: ENST00000397517.2:c.792T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.544T>C
  hgvsp: ENST00000444574.1:c.544T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.828T>C
  hgvsp: ENST00000376547.3:c.828T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.735T>C
  hgvsp: ENST00000539966.1:c.735T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.195T>C
  hgvsp: ENST00000376554.4:c.195T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4843
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr276Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

13-99116108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116108
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116108
    reference: chr 13
allele count: 1
allele frequency: 8.34752412434472e-6
allele num: 119796
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-18T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-18T>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5679
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4835
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20480
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11801
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

13-99116109-CAATT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116109
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116105
    reference: chr 13
allele count: 1
allele frequency: 8.351846593281774e-6
allele num: 119734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-23_187-20delAATT
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-23_536-20delAATT
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-23_784-20delAATT
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-23_820-20delAATT
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-23_727-20delAATT
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4662
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4835
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5644
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: CAATT
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

13-99116114-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116114
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116114
    reference: chr 13
allele count: 2
allele frequency: 1.672296732332185e-5
allele num: 119596
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-24T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-24T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-24T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-24T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-24T>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5592
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4834
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

13-99116121-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116121
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116121
    reference: chr 13
allele count: 1
allele frequency: 8.378156470450242e-6
allele num: 119358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-31C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-31C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-31C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-31C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-31C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4830
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4861
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genotype quality: GenotypeQuality
  all individuals: 5537
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 122
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

13-99116124-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116124
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116124
    reference: chr 13
allele count: 18
allele frequency: 1.50945927814303e-4
allele num: 119248
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-34T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-34T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-34T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-34T>C
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-34T>C
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20490
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 5537
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-99116132-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116132
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116132
    reference: chr 13
allele count: 2
allele frequency: 1.687535860137028e-5
allele num: 118516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-42G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-42G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20476
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-99116135-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116135
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116135
    reference: chr 13
allele count: 1
allele frequency: 8.447515585666255e-6
allele num: 118378
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-45C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-45C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-45C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-45C>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-45C>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 4823
  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

13-99116137-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116137
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116137
    reference: chr 13
allele count: 3
allele frequency: 2.537727549570278e-5
allele num: 118216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-47A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-47A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-47A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-47A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-47A>G
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 395
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 900
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genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 268
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4822
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4835
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genotype quality: GenotypeQuality
  all individuals: 249
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genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3842
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

13-99116139-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116139
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116139
    reference: chr 13
allele count: 1
allele frequency: 8.47443263673497e-6
allele num: 118002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-49G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-49G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-49G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-49G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-49G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3841
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 453
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

13-99116140-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99116140
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99116140
    reference: chr 13
allele count: 1
allele frequency: 8.47687508476875e-6
allele num: 117968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.784-50A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.727-50A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.820-50A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.536-50A>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.187-50A>G
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

13-99118583-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99118583
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99118583
    reference: chr 13
allele count: 2
allele frequency: 1.745078877565266e-5
allele num: 114608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.535+47C>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.186+47C>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.819+47C>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.783+47C>G
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.726+47C>G
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12850
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2596
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12810
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4462
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5719
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-99118589-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99118589
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99118589
    reference: chr 13
allele count: 2
allele frequency: 1.744074506862933e-5
allele num: 114674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.726+41G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.535+41G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.783+41G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.819+41G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.186+41G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8617
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4946
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5085
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4820
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2078
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5733
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

13-99118590-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99118590
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99118590
    reference: chr 13
allele count: 29735
allele frequency: 2.580177709902468e-1
allele num: 115244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.726+40G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.535+40G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.783+40G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.186+40G>A
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.819+40G>A
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 5.25e1
  variant carriers: 559
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.75e1
  variant carriers: 837
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 3.75e1
  variant carriers: 1911
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 305
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 1.75e1
  variant carriers: 4874
genotype depth: GenotypeDepth
  all individuals: 10135
  bin: 2.75e1
  variant carriers: 4487
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 4.25e1
  variant carriers: 1221
genotype depth: GenotypeDepth
  all individuals: 16166
  bin: 2.25e1
  variant carriers: 5574
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 7.5e0
  variant carriers: 404
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 1.25e1
  variant carriers: 2301
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.75e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 3.25e1
  variant carriers: 2933
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 7.25e1
  variant carriers: 199
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 3.25e1
  variant carriers: 150
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 2.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 3115
  bin: 6.75e1
  variant carriers: 295
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 4.25e1
  variant carriers: 148
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 5.75e1
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 4.75e1
  variant carriers: 288
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.5e0
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.25e1
  variant carriers: 312
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 11358
  bin: 6.25e1
  variant carriers: 345
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 8.75e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 7.75e1
  variant carriers: 345
num of homozygotes: 3764
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

13-99118591-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99118591
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 99118591
    reference: chr 13
allele count: 3
allele frequency: 2.583089374892371e-5
allele num: 116140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000442539
  ensembl transcript: ENST00000539966
  gene symbol: STK24
  hgvsc: ENST00000539966.1:c.726+39C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000402764
  ensembl transcript: ENST00000444574
  gene symbol: STK24
  hgvsc: ENST00000444574.1:c.535+39C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000380651
  ensembl transcript: ENST00000397517
  gene symbol: STK24
  hgvsc: ENST00000397517.2:c.783+39C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365737
  ensembl transcript: ENST00000376554
  gene symbol: STK24
  hgvsc: ENST00000376554.4:c.186+39C>T
  variant of: http://identifiers.org/hgnc/11403
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102572
  ensembl protein: ENSP00000365730
  ensembl transcript: ENST00000376547
  gene symbol: STK24
  hgvsc: ENST00000376547.3:c.819+39C>T
  variant of: http://identifiers.org/hgnc/11403
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17337
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12246
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3391
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2637
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3864
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.915e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.124e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.443e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

DP
type: SiteQuality
SIO_000300: 2.836471e6

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3866
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33832
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4140
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.63e-1

FS
type: SiteQuality
SIO_000300: 7.349e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.723e0

DP
type: SiteQuality
SIO_000300: 2.83617e6

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
all individuals: 3366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.835892e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 1.584e0

QD
type: SiteQuality
SIO_000300: 1.611e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.031e0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.189e0

VQSLOD
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

GenotypeQuality
all individuals: 7882
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818181818181818e-4
allele num: 16500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.834584e6

QD
type: SiteQuality
SIO_000300: 1.18e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.349e0

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

GenotypeQuality
all individuals: 3360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4121
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33832
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.18e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

DP
type: SiteQuality
SIO_000300: 2.834584e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.349e0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33828
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.834351e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.569e0

QD
type: SiteQuality
SIO_000300: 1.016e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33820
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 5.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

FS
type: SiteQuality
SIO_000300: 6.948e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.758e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.828e0

DP
type: SiteQuality
SIO_000300: 2.831953e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.235e1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33820
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7404
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 9.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.544e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e0

VQSLOD
type: SiteQuality
SIO_000300: -1.317e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

QD
type: SiteQuality
SIO_000300: 1.011e1

DP
type: SiteQuality
SIO_000300: 2.827707e6

GenotypeQuality
all individuals: 6134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3766
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.313475997686524e-3
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000300030003e-5
allele num: 66660
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 3.682e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.811656e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001500375093773e-5
allele num: 66650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.313e-1

QD
type: SiteQuality
SIO_000300: 1.988e1

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

DP
type: SiteQuality
SIO_000300: 2.810521e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.494e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.737e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 22

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1009
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.702134686402258e-4
allele num: 66614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.184e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.437e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33769
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variant carriers: 3

GenotypeQuality
all individuals: 1356
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.942501942501943e-4
allele num: 10296
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.142e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.65e-1

DP
type: SiteQuality
SIO_000300: 2.789546e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.074e0

FS
type: SiteQuality
SIO_000300: 1.899e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 190
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4875
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9031
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.852652e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.633e1

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.82e0

GenotypeQuality
all individuals: 8928
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4753
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.055207601356512e-5
allele num: 65462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

DP
type: SiteQuality
SIO_000300: 1.855259e6

QD
type: SiteQuality
SIO_000300: 9.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.727e0

FS
type: SiteQuality
SIO_000300: 8.79e-1

GenotypeQuality
all individuals: 4811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1976
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.050268423621279e-5
allele num: 65568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.859946e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.071e0

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 9.087999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.813e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

QD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeQuality
all individuals: 412
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
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variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524157902758726e-5
allele num: 65610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
type: SiteQuality
SIO_000300: 1.938e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 6.85e0

DP
type: SiteQuality
SIO_000300: 1.869281e6

VQSLOD
type: SiteQuality
SIO_000300: -1.321e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.943e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 5044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15811
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 216
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4449
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variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.332267519317879e-4
allele num: 15012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.891957e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.082e0

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.164e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQ
type: SiteQuality
SIO_000300: 5.889e1

GenotypeQuality
all individuals: 739
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15824
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2488
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3262
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
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variant carriers: 0

GenotypeQuality
all individuals: 12955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.625149065853981e-5
allele num: 15094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.725e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

QD
type: SiteQuality
SIO_000300: 1.613e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

DP
type: SiteQuality
SIO_000300: 1.900892e6

GenotypeQuality
all individuals: 3270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1228
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3585
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variant carriers: 0

GenotypeQuality
all individuals: 4521
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12784
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65852
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.547e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 1.906293e6

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.398e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 548
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variant carriers: 0

GenotypeQuality
all individuals: 4521
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15136
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.25e-1

FS
type: SiteQuality
SIO_000300: 4.547e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.398e1

DP
type: SiteQuality
SIO_000300: 1.906293e6

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.559e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

DP
type: SiteQuality
SIO_000300: 1.917386e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.164e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.414e1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6271
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.578081831337982e-5
allele num: 15202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-1

FS
type: SiteQuality
SIO_000300: 1.045e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

DP
type: SiteQuality
SIO_000300: 1.919065e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 1114
bin: 3.75e1
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GenotypeQuality
all individuals: 922
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15847
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15202
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 1.919065e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 1.221e1

FS
type: SiteQuality
SIO_000300: 1.045e1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

GenotypeQuality
all individuals: 15856
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 894
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4619
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6334
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.555657532450504e-5
allele num: 15254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e0

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

FS
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 5.905e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 1.925673e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

GenotypeQuality
all individuals: 917
bin: 5.25e1
variant carriers: 879

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 102

GenotypeQuality
all individuals: 630
bin: 4.75e1
variant carriers: 597

GenotypeQuality
all individuals: 1499
bin: 8.75e1
variant carriers: 1333

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 224

GenotypeQuality
all individuals: 1208
bin: 7.25e1
variant carriers: 1008

GenotypeQuality
all individuals: 2481
bin: 9.25e1
variant carriers: 2275

African
type: Population
allele count: 8147
allele frequency: 7.845724191063174e-1
allele num: 10384
num of homozygotes: 3194

European (Finnish)
type: Population
allele count: 5887
allele frequency: 8.916994850045441e-1
allele num: 6602
num of homozygotes: 2621

East Asian
type: Population
allele count: 6254
allele frequency: 7.275476966030712e-1
allele num: 8596
num of homozygotes: 2282

South Asian
type: Population
allele count: 10851
allele frequency: 6.697321318355759e-1
allele num: 16202
num of homozygotes: 3665

Other
type: Population
allele count: 750
allele frequency: 8.314855875831486e-1
allele num: 902
num of homozygotes: 315

Latino
type: Population
allele count: 6522
allele frequency: 5.68019508796377e-1
allele num: 11482
num of homozygotes: 1871

European (Non-Finnish)
type: Population
allele count: 58431
allele frequency: 8.797464542744436e-1
allele num: 66418
num of homozygotes: 25709

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.580000000000001e-2

DP
type: SiteQuality
SIO_000300: 2.521765e6

QD
type: SiteQuality
SIO_000300: 2.591e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

FS
type: SiteQuality
SIO_000300: 1.28e0

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.155e0

GenotypeQuality
all individuals: 20383
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.007971123477215e-5
allele num: 66490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.06e1

DP
type: SiteQuality
SIO_000300: 2.291883e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 3.744e0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.54e0

GenotypeQuality
all individuals: 5681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3763
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20383
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 4633
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.619620546043498e-3
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.291883e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.54e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 3.744e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

QD
type: SiteQuality
SIO_000300: 1.06e1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20362
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156877231867996e-5
allele num: 16242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503578516870151e-5
allele num: 66508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.245e1

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.482e0

DP
type: SiteQuality
SIO_000300: 2.293226e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4583
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20363
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.510735550610453e-5
allele num: 66508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.542e1

DP
type: SiteQuality
SIO_000300: 2.295703e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4618
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20373
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3282
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006162633398467e-5
allele num: 66530
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.225340031858841e-4
allele num: 16322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.303147e6

QD
type: SiteQuality
SIO_000300: 1.341e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 2.589e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

GenotypeQuality
all individuals: 458
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4645
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.838460595661233e-4
allele num: 16318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.283e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.7596e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -2.412e0

QD
type: SiteQuality
SIO_000300: 1.111e1

DP
type: SiteQuality
SIO_000300: 2.304521e6

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
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variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2658
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20378
bin: 9.75e1
variant carriers: 8

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.011783094865938e-5
allele num: 66536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.824e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-2

QD
type: SiteQuality
SIO_000300: 1.197e1

DP
type: SiteQuality
SIO_000300: 2.306476e6

GenotypeQuality
all individuals: 300
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20384
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5729
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13139
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variant carriers: 0

GenotypeQuality
all individuals: 4661
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3788
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 7.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

FS
type: SiteQuality
SIO_000300: 2.477e0

DP
type: SiteQuality
SIO_000300: 2.310708e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
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GenotypeQuality
all individuals: 4709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20393
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.278e0

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.023e-1

DP
type: SiteQuality
SIO_000300: 2.317413e6

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2694
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variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.25e1
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GenotypeQuality
all individuals: 221
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variant carriers: 0

GenotypeQuality
all individuals: 20394
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variant carriers: 1

GenotypeQuality
all individuals: 13785
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.181e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

DP
type: SiteQuality
SIO_000300: 2.3185e6

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4801
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20423
bin: 9.75e1
variant carriers: 42

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4735
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.650519031141869e-4
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.2058461261153e-4
allele num: 66574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

DP
type: SiteQuality
SIO_000300: 2.323209e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20423
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
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variant carriers: 0

GenotypeQuality
all individuals: 3807
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variant carriers: 0

GenotypeQuality
all individuals: 13874
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5843
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004175804368072e-5
allele num: 66574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.508e1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

FS
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 2.323209e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4777
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20424
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 4839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.939625260235947e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.505028369007235e-5
allele num: 66622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.192e1

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

FS
type: SiteQuality
SIO_000300: 7.371e0

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

DP
type: SiteQuality
SIO_000300: 2.326596e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

GenotypeQuality
all individuals: 4851
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 20478
bin: 9.75e1
variant carriers: 114

GenotypeQuality
all individuals: 3825
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variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 102
allele frequency: 1.530520376928156e-3
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.64304235090752e-4
allele num: 11570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 5.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.426e0

DP
type: SiteQuality
SIO_000300: 2.330731e6

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14239
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4815
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 2.331777e6

FS
type: SiteQuality
SIO_000300: 8.087e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.33e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.078e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 3840
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 4880
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GenotypeQuality
all individuals: 5905
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variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001860576778802e-5
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.209921355111918e-3
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.358e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 2.332424e6

FS
type: SiteQuality
SIO_000300: 2.597e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 4902
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GenotypeQuality
all individuals: 3846
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.91e1

DP
type: SiteQuality
SIO_000300: 2.333584e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.661e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.82e-1

QD
type: SiteQuality
SIO_000300: 1.434e1

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.448e0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e-1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 3423
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GenotypeQuality
all individuals: 20467
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variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
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South Asian
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499880009599232e-5
allele num: 66672
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MQRankSum
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DP
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QD
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66704
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QD
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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Other
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Latino
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African
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South Asian
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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FS
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

African
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East Asian
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European (Non-Finnish)
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allele num: 66704
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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African
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allele num: 10404
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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MQ
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BaseQRankSum
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DP
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MQRankSum
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QD
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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European (Finnish)
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Other
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South Asian
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VQSLOD
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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African
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Other
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East Asian
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DP
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ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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African
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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FS
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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QD
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DP
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BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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MQRankSum
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QD
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VQSLOD
type: SiteQuality
SIO_000300: -9.455e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e0

DP
type: SiteQuality
SIO_000300: 2.336968e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.157e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

DP
type: SiteQuality
SIO_000300: 2.336829e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e-1

QD
type: SiteQuality
SIO_000300: 1.51e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3851
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.87e-1

FS
type: SiteQuality
SIO_000300: 2.043e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
SIO_000300: 1.683e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

DP
type: SiteQuality
SIO_000300: 2.336623e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.894e1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.985e0

VQSLOD
type: SiteQuality
SIO_000300: -1.091e0

DP
type: SiteQuality
SIO_000300: 2.334866e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.294e1

FS
type: SiteQuality
SIO_000300: 1.355e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 5.892e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.153088850603002e-5
allele num: 16252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.498e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: -4.77e-1

QD
type: SiteQuality
SIO_000300: 1.34e1

FS
type: SiteQuality
SIO_000300: 2.988e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.424e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

QD
type: SiteQuality
SIO_000300: 1.299e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.906e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.719e0

DP
type: SiteQuality
SIO_000300: 2.33109e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50952510340247e-5
allele num: 66246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.63e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.299629e6

MQ
type: SiteQuality
SIO_000300: 5.838e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.50110518788194e-5
allele num: 15382
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.297817e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.021330593993595e-5
allele num: 66196
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.287593e6

FS
type: SiteQuality
SIO_000300: 2.721e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.397e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
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South Asian
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allele frequency: 6.610259122157589e-5
allele num: 15128
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66140
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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DP
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 9971
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
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allele num: 11558
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.129718234981393e-3
allele num: 15048
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66110
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MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.62e-1

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2729
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4848
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033704456511847e-5
allele num: 65926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.263574e6

MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 7.985e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.511e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 1.17e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

GenotypeQuality
all individuals: 20475
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-5
allele num: 65880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: -2.451e-1

FS
type: SiteQuality
SIO_000300: 4.96e0

DP
type: SiteQuality
SIO_000300: 2.26159e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.462e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.336e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.165e0

GenotypeQuality
all individuals: 588
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20478
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2726
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.038128512836093e-5
allele num: 65830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.972528238739367e-5
allele num: 14342
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 1.517e0

DP
type: SiteQuality
SIO_000300: 2.259656e6

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.25e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4820
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519803033526855e-5
allele num: 65798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.88e-1

DP
type: SiteQuality
SIO_000300: 2.258779e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.244e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.508e1

GenotypeQuality
all individuals: 515
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4840
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3842
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520635017183176e-5
allele num: 65762
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.407e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

DP
type: SiteQuality
SIO_000300: 2.258357e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

GenotypeQuality
all individuals: 657
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5282
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3067
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5251
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.212709192335678e-4
allele num: 8246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576889113157563e-5
allele num: 63416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.369e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.008e1

DP
type: SiteQuality
SIO_000300: 1.399029e6

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 2.915e0

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 912
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576044129235618e-5
allele num: 63450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.739452756436177e-5
allele num: 14838
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.331e0

QD
type: SiteQuality
SIO_000300: 8.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.431885e6

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -5.145999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2821
bin: 3.75e1
variant carriers: 190

GenotypeQuality
all individuals: 774
bin: 9.25e1
variant carriers: 246

GenotypeQuality
all individuals: 25082
bin: 9.75e1
variant carriers: 22942

GenotypeQuality
all individuals: 1127
bin: 5.25e1
variant carriers: 306

GenotypeQuality
all individuals: 2231
bin: 2.25e1
variant carriers: 91

European (Non-Finnish)
type: Population
allele count: 18401
allele frequency: 2.893057040437708e-1
allele num: 63604
num of homozygotes: 2534

East Asian
type: Population
allele count: 1443
allele frequency: 1.75121359223301e-1
allele num: 8240
num of homozygotes: 119

European (Finnish)
type: Population
allele count: 1558
allele frequency: 2.430577223088924e-1
allele num: 6410
num of homozygotes: 189

Latino
type: Population
allele count: 2342
allele frequency: 2.157729869172655e-1
allele num: 10854
num of homozygotes: 225

African
type: Population
allele count: 2143
allele frequency: 2.147724994988976e-1
allele num: 9978
num of homozygotes: 215

Other
type: Population
allele count: 222
allele frequency: 2.551724137931035e-1
allele num: 870
num of homozygotes: 30

South Asian
type: Population
allele count: 3626
allele frequency: 2.371794871794872e-1
allele num: 15288
num of homozygotes: 452

DP
type: SiteQuality
SIO_000300: 1.541468e6

VQSLOD
type: SiteQuality
SIO_000300: 5.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.855e1

GenotypeQuality
all individuals: 4520
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3771
bin: 3.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555984315678098e-5
allele num: 64268
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.403268445085316e-4
allele num: 8322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10958
num of homozygotes: 0