12-20801838-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801838
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801838
    reference: chr 12
allele count: 13
allele frequency: 1.082142976059668e-4
allele num: 120132
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+13G>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+13G>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7861
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6873
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2094
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6414
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/12-20801840-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801840
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801840
    reference: chr 12
allele count: 5
allele frequency: 4.227042929847996e-5
allele num: 118286
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+15A>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+15A>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3170
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9045
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 18095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 8522
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 395
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genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 691
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2893
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3327
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.690902942171119e-4
  allele num: 5914
  num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

12-20801840-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801840
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801840
    reference: chr 12
allele count: 106
allele frequency: 8.96133101127775e-4
allele num: 118286
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+15A>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+15A>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8924
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 3.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 9.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 562
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 231
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  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 8522
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 461
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 906
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  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 5
  allele frequency: 8.454514710855597e-4
  allele num: 5914
  num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

12-20801841-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801841
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801841
    reference: chr 12
allele count: 95
allele frequency: 7.963251689047595e-4
allele num: 119298
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+16C>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+16C>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 11
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
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  variant carriers: 13
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8677
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6576
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/12-20801842-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801842
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801842
    reference: chr 12
allele count: 1
allele frequency: 8.426303549159055e-6
allele num: 118676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+17C>A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+17C>A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8389
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2976
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3807
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16711
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9802
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

12-20801842-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801842
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801842
    reference: chr 12
allele count: 1
allele frequency: 8.426303549159055e-6
allele num: 118676
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+17C>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+17C>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3807
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8389
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 200
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 892
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

12-20801844-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801844
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801846
    reference: chr 12
allele count: 2
allele frequency: 1.749781277340332e-5
allele num: 114300
alternate allele: ATT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+19_2769+20insTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+19_2066+20insTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7930
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/12-20801844-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801844
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801844
    reference: chr 12
allele count: 2
allele frequency: 1.749781277340332e-5
allele num: 114300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+19A>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+19A>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 11822
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genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 822
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 999
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genotype quality: GenotypeQuality
  all individuals: 385
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genotype quality: GenotypeQuality
  all individuals: 9941
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 8.954154727793696e-5
  allele num: 11168
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

12-20801845-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801846
    reference: chr 12
allele count: 165
allele frequency: 1.671868033883192e-3
allele num: 98692
alternate allele: GT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+24dupT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+24dupT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 975
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  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5701
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 128
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 19
  allele frequency: 1.574411667219092e-3
  allele num: 12068
  num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-20801845-G-GTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801848
    reference: chr 12
allele count: 69
allele frequency: 6.991448141693349e-4
allele num: 98692
alternate allele: GTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+22_2769+24dupTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+22_2066+24dupTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5701
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5906
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

12-20801845-GTTTTCTTTTCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801834
    reference: chr 12
allele count: 17
allele frequency: 1.722530701576622e-4
allele num: 98692
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 2.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5701
  bin: 2.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 1.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 11
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6698
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: GTTTTCTTTTCT
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum

12-20801845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
allele count: 1
allele frequency: 1.013253353868601e-5
allele num: 98692
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+20G>A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+20G>A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 12068
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

12-20801845-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801847
    reference: chr 12
allele count: 135
allele frequency: 1.367892027722612e-3
allele num: 98692
alternate allele: GTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+23_2769+24dupTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+23_2066+24dupTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 6
  allele frequency: 8.957897879964168e-4
  allele num: 6698
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

12-20801845-G-GTTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801849
    reference: chr 12
allele count: 18
allele frequency: 1.823856036963482e-4
allele num: 98692
alternate allele: GTTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+21_2769+24dupTTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+21_2066+24dupTTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 758
  num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

12-20801849-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801849
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
allele count: 1
allele frequency: 9.683166782864668e-6
allele num: 103272
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+25dupC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+25dupC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9341
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8487
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3624
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6556
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10232
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

12-20801849-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801849
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801848
    reference: chr 12
allele count: 23
allele frequency: 2.227128360058874e-4
allele num: 103272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+25delC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+25delC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7921
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9341
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5016
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12367
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8487
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3624
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3268
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6556
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 5188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 3
  allele frequency: 1.978630787495053e-4
  allele num: 15162
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: TC
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-20801850-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801851
    reference: chr 12
allele count: 523
allele frequency: 2.253921737631443e-2
allele num: 23204
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+29dupT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+29dupT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 1.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 2.25e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 2.25e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 41262
  bin: 2.5e0
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 6.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 6.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 9.75e1
  variant carriers: 93
num of homozygotes: 10
population: European (Finnish)
  type: Population
  allele count: 13
  allele frequency: 9.206798866855524e-3
  allele num: 1412
  num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

12-20801850-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801852
    reference: chr 12
allele count: 42
allele frequency: 1.810032752973625e-3
allele num: 23204
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+28_2066+29dupTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+28_2769+29dupTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41262
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 3
  allele frequency: 1.101321585903084e-3
  allele num: 2724
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

12-20801850-C-CTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801853
    reference: chr 12
allele count: 19
allele frequency: 8.188243406309257e-4
allele num: 23204
alternate allele: CTTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+27_2066+29dupTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+27_2769+29dupTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 3.671071953010279e-4
  allele num: 2724
  num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-20801850-C-CTTTTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801856
    reference: chr 12
allele count: 15
allele frequency: 6.464402689191519e-4
allele num: 23204
alternate allele: CTTTTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+29_2769+30insTTTTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+29_2066+30insTTTTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41262
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 9.75e1
  variant carriers: 8
num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 9.746588693957114e-4
  allele num: 2052
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

12-20801850-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
allele count: 3777
allele frequency: 1.627736597138424e-1
allele num: 23204
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+25C>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+25C>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 1.75e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 707
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 4.25e1
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 6833
  bin: 3.75e1
  variant carriers: 682
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 2.25e1
  variant carriers: 473
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 756
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.25e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 9.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.75e1
  variant carriers: 310
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 2.25e1
  variant carriers: 236
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 128
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 1.75e1
  variant carriers: 241
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 6.75e1
  variant carriers: 133
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 215
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 264
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.75e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 179
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.25e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.25e1
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 7.5e0
  variant carriers: 245
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 41262
  bin: 2.5e0
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 6.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 9.75e1
  variant carriers: 1451
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.75e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 87
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 562
  allele frequency: 2.64346190028222e-1
  allele num: 2126
  num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

12-20801850-C-CTTTTTTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801850
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801858
    reference: chr 12
allele count: 3
allele frequency: 1.292880537838304e-4
allele num: 23204
alternate allele: CTTTTTTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2052
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

12-20801851-TTTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801851
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801847
    reference: chr 12
allele count: 4
allele frequency: 8.765778401122019e-5
allele num: 45632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+30_2066+33delCTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+30_2769+33delCTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1988
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: TTTTC
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

12-20801851-TTTTCTTTTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801851
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801841
    reference: chr 12
allele count: 2
allele frequency: 4.38288920056101e-5
allele num: 45632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4432
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: TTTTCTTTTTC
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

12-20801853-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801853
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801851
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 49276
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+30_2769+31delCT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+30_2066+31delCT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2236
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: TTC
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

12-20801853-TTCTTTTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801853
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801845
    reference: chr 12
allele count: 2
allele frequency: 4.058771004139947e-5
allele num: 49276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6597
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10591
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7986
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4860
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: TTCTTTTTC
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

12-20801854-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801854
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801853
    reference: chr 12
allele count: 446
allele frequency: 9.465195246179966e-3
allele num: 47120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+30delC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+30delC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 3.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 2.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 1.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 4.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 1.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 3.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 5.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 9611
  bin: 2.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 6.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 2.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 5641
  bin: 2.5e0
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 6412
  bin: 1.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 9.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 8139
  bin: 1.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 6.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 12525
  bin: 7.5e0
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 3.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 3.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 4.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 8
num of homozygotes: 8
population: South Asian
  type: Population
  allele count: 31
  allele frequency: 3.52112676056338e-3
  allele num: 8804
  num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: TC
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

12-20801854-TCTTTTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801854
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801847
    reference: chr 12
allele count: 15
allele frequency: 3.183361629881155e-4
allele num: 47120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+30_2769+36delCTTTTTC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+30_2066+36delCTTTTTC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8612
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 1.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 5641
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9611
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6412
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8139
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12525
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 2
population: European (Non-Finnish)
  type: Population
  allele count: 10
  allele frequency: 4.27715996578272e-4
  allele num: 23380
  num of homozygotes: 2
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: TCTTTTTC
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-20801855-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801855
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801857
    reference: chr 12
allele count: 1
allele frequency: 9.174985320023488e-6
allele num: 108992
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+34_2066+35dupTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+34_2769+35dupTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16568
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10652
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

12-20801855-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801855
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801855
    reference: chr 12
allele count: 101715
allele frequency: 9.332336318261891e-1
allele num: 108992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+30C>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+30C>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 7.5e0
  variant carriers: 3594
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 3.25e1
  variant carriers: 5420
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 2.75e1
  variant carriers: 8302
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 416
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.75e1
  variant carriers: 448
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.5e0
  variant carriers: 471
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 1.25e1
  variant carriers: 8734
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.75e1
  variant carriers: 1052
genotype depth: GenotypeDepth
  all individuals: 11675
  bin: 2.25e1
  variant carriers: 11583
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 12027
  bin: 1.75e1
  variant carriers: 11904
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 3.75e1
  variant carriers: 3169
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 4.25e1
  variant carriers: 1809
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 648
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 351
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 5.75e1
  variant carriers: 2804
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.25e1
  variant carriers: 2387
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 1.75e1
  variant carriers: 976
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 2.25e1
  variant carriers: 1466
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 2.75e1
  variant carriers: 1210
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 4.75e1
  variant carriers: 3774
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 1.25e1
  variant carriers: 398
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 3.25e1
  variant carriers: 2540
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 2483
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 6.75e1
  variant carriers: 3610
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 124
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 9.25e1
  variant carriers: 1993
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 7.75e1
  variant carriers: 3107
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 16568
  bin: 9.75e1
  variant carriers: 16560
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 5.25e1
  variant carriers: 3839
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 8.75e1
  variant carriers: 1686
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 6.25e1
  variant carriers: 4106
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 8.25e1
  variant carriers: 2550
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 3.75e1
  variant carriers: 2983
num of homozygotes: 47365
population: Latino
  type: Population
  allele count: 10179
  allele frequency: 9.555951933909125e-1
  allele num: 10652
  num of homozygotes: 4858
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

12-20801856-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801856
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801856
    reference: chr 12
allele count: 1
allele frequency: 1.399462606359158e-5
allele num: 71456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+31T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+31T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12159
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11221
  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7068
  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 777
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4086
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

12-20801856-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801856
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801856
    reference: chr 12
allele count: 1
allele frequency: 1.399462606359158e-5
allele num: 71456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+31T>G
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+31T>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 351
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11600
  num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

12-20801857-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801857
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801857
    reference: chr 12
allele count: 1
allele frequency: 1.180414561594032e-5
allele num: 84716
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+32T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+32T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8336
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

12-20801859-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801859
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801859
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 84150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+34T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+34T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8306
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-20801860-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801860
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801860
    reference: chr 12
allele count: 2
allele frequency: 2.591344908007256e-5
allele num: 77180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+35T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+35T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6952
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7611
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4804
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

12-20801860-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801860
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801859
    reference: chr 12
allele count: 3
allele frequency: 3.887017362010883e-5
allele num: 77180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+36delC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+36delC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7611
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6952
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7244
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: TC
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

12-20801861-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801862
    reference: chr 12
allele count: 4267
allele frequency: 2.288917498122519e-1
allele num: 18642
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+52dupT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+52dupT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 2634
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 7.5e0
  variant carriers: 4478
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 1.75e1
  variant carriers: 1108
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.5e0
  variant carriers: 1452
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 558
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.25e1
  variant carriers: 266
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 420
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 738
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 508
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 326
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 1007
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 851
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 196
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 6.75e1
  variant carriers: 236
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 686
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 1290
genotype quality: GenotypeQuality
  all individuals: 33141
  bin: 2.5e0
  variant carriers: 1025
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 492
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 9.75e1
  variant carriers: 709
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 592
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.75e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.5e0
  variant carriers: 1204
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 109
num of homozygotes: 335
population: Other
  type: Population
  allele count: 44
  allele frequency: 2.857142857142857e-1
  allele num: 154
  num of homozygotes: 3
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

12-20801861-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801863
    reference: chr 12
allele count: 2344
allele frequency: 1.257375818045274e-1
allele num: 18642
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+51_2066+52dupTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+51_2769+52dupTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 1293
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.5e0
  variant carriers: 893
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 327
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 7.5e0
  variant carriers: 2354
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 1.75e1
  variant carriers: 557
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 286
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 293
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 9.75e1
  variant carriers: 623
genotype quality: GenotypeQuality
  all individuals: 33141
  bin: 2.5e0
  variant carriers: 469
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 452
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 133
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 463
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 545
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 195
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.25e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.5e0
  variant carriers: 587
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 6.75e1
  variant carriers: 169
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.75e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 272
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 384
num of homozygotes: 208
population: Latino
  type: Population
  allele count: 227
  allele frequency: 9.759243336199484e-2
  allele num: 2326
  num of homozygotes: 20
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

12-20801861-C-CTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801864
    reference: chr 12
allele count: 767
allele frequency: 4.114365411436541e-2
allele num: 18642
alternate allele: CTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+50_2769+52dupTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+50_2066+52dupTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 433
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.5e0
  variant carriers: 284
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 1.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 7.5e0
  variant carriers: 897
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.5e0
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 129
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 116
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 9.75e1
  variant carriers: 240
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 33141
  bin: 2.5e0
  variant carriers: 180
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 6.75e1
  variant carriers: 78
num of homozygotes: 69
population: Latino
  type: Population
  allele count: 82
  allele frequency: 3.52536543422184e-2
  allele num: 2326
  num of homozygotes: 8
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

12-20801861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
allele count: 756
allele frequency: 4.055358867074348e-2
allele num: 18642
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+36C>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+36C>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 7.5e0
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 1.75e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 9.75e1
  variant carriers: 407
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 33141
  bin: 2.5e0
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 6.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.75e1
  variant carriers: 21
num of homozygotes: 0
population: Other
  type: Population
  allele count: 5
  allele frequency: 3.246753246753246e-2
  allele num: 154
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

12-20801861-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801860
    reference: chr 12
allele count: 1808
allele frequency: 9.69853020062225e-2
allele num: 18642
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+52delT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+52delT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 1.75e1
  variant carriers: 518
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 1041
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.5e0
  variant carriers: 269
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 7.5e0
  variant carriers: 1012
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 186
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.25e1
  variant carriers: 161
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 183
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 203
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 248
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.5e0
  variant carriers: 178
genotype quality: GenotypeQuality
  all individuals: 33141
  bin: 2.5e0
  variant carriers: 180
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 169
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 250
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 6.75e1
  variant carriers: 136
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.75e1
  variant carriers: 91
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 9.75e1
  variant carriers: 278
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 212
num of homozygotes: 33
population: European (Non-Finnish)
  type: Population
  allele count: 957
  allele frequency: 1.051417270929466e-1
  allele num: 9102
  num of homozygotes: 13
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: CT
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

12-20801861-C-CTTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801865
    reference: chr 12
allele count: 124
allele frequency: 6.651646819010835e-3
allele num: 18642
alternate allele: CTTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+49_2769+52dupTTTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+49_2066+52dupTTTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 7.5e0
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.5e0
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 1.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 1.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 9.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 6.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.5e0
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 33141
  bin: 2.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 13
num of homozygotes: 9
population: European (Finnish)
  type: Population
  allele count: 6
  allele frequency: 3.952569169960474e-3
  allele num: 1518
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

12-20801862-T-TTTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801862
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801865
    reference: chr 12
allele count: 3
allele frequency: 4.416961130742049e-4
allele num: 6792
alternate allele: TTTC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+39_2769+40insCTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+39_2066+40insCTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8087
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44155
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 214
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

12-20801863-T-TTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801863
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801865
    reference: chr 12
allele count: 1
allele frequency: 1.708116971850232e-5
allele num: 58544
alternate allele: TTC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+39_2769+40insCT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+39_2066+40insCT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 432
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 444
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9580
  num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

12-20801864-T-TTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801864
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801866
    reference: chr 12
allele count: 1
allele frequency: 1.217759809055262e-5
allele num: 82118
alternate allele: TTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+40_2066+41insGT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+40_2769+41insGT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9099
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5985
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 13580
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

12-20801865-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801865
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801865
    reference: chr 12
allele count: 1
allele frequency: 1.140745134722e-5
allele num: 87662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+40T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+40T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8202
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13539
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9744
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-20801865-T-TTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801865
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801867
    reference: chr 12
allele count: 178
allele frequency: 2.030526339805161e-3
allele num: 87662
alternate allele: TTC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+41_2769+42insCT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+41_2066+42insCT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13539
  bin: 1.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 5
genotype quality: GenotypeQuality
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  variant carriers: 3
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 729
  bin: 9.75e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.25e1
  variant carriers: 9
num of homozygotes: 1
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7074
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

12-20801866-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801866
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801867
    reference: chr 12
allele count: 5
allele frequency: 5.602240896358544e-5
allele num: 89250
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+41_2769+42insC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+41_2066+42insC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8317
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 16956
  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13758
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 7887
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
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genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21055
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 957
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 6334
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 730
  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 5
  allele frequency: 5.196424859696529e-4
  allele num: 9622
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP

12-20801867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801867
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801867
    reference: chr 12
allele count: 3
allele frequency: 3.314624121624608e-5
allele num: 90508
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+42T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+42T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16882
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1200
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 779
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 754
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

12-20801867-T-TTTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801867
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801870
    reference: chr 12
allele count: 4
allele frequency: 4.41949882883281e-5
allele num: 90508
alternate allele: TTTC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+44_2769+45insCTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+44_2066+45insCTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2492
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
  type: Population
  allele count: 2
  allele frequency: 2.763957987838585e-4
  allele num: 7236
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

12-20801868-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801868
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801868
    reference: chr 12
allele count: 2
allele frequency: 2.186365822729459e-5
allele num: 91476
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+43T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+43T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 604
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  variant carriers: 2
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7282
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

12-20801868-T-TTTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801868
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801871
    reference: chr 12
allele count: 2
allele frequency: 2.186365822729459e-5
allele num: 91476
alternate allele: TTTC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+45_2066+46insCTT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+45_2769+46insCTT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
  type: Population
  allele count: 2
  allele frequency: 1.973164956590371e-4
  allele num: 10136
  num of homozygotes: 1
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

12-20801869-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801869
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801869
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 89970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+44T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+44T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 45872
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

12-20801869-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801869
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801870
    reference: chr 12
allele count: 1
allele frequency: 1.111481604979438e-5
allele num: 89970
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+44_2769+45insC
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+44_2066+45insC
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 45872
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

12-20801871-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801871
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801871
    reference: chr 12
allele count: 4
allele frequency: 4.57331016189518e-5
allele num: 87464
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+46T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+46T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 1
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9852
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

12-20801872-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801872
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801872
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 85206
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+47T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+47T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6554
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6832
  num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

12-20801873-T-TTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801873
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801875
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 83268
alternate allele: TTC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2769+49_2769+50insCT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2066+49_2066+50insCT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 4082
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 5632
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 157
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 720
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

12-20801877-TGAGACAGAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20801877
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20801868
    reference: chr 12
allele count: 1
allele frequency: 1.544163063619518e-5
allele num: 64760
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16267
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 429
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4592
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 600
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: TGAGACAGAG
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

12-20803328-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803328
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803328
    reference: chr 12
allele count: 305
allele frequency: 2.641058501610613e-3
allele num: 115484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-51A>G
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-51A>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5456
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  variant carriers: 26
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 11027
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  variant carriers: 63
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 409
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
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  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 453
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2168
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1595
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num of homozygotes: 2
population: African
  type: Population
  allele count: 8
  allele frequency: 8.056394763343404e-4
  allele num: 9930
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

12-20803334-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803334
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803334
    reference: chr 12
allele count: 2
allele frequency: 1.731961619730507e-5
allele num: 115476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-45G>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-45G>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 265
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 300
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 850
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

12-20803337-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803337
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803337
    reference: chr 12
allele count: 13
allele frequency: 1.124042402338008e-4
allele num: 115654
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-42T>G
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-42T>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11695
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9436
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11242
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2894
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17891
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3310
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4334
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4584
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5374
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2194
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11452
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-20803339-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803339
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803339
    reference: chr 12
allele count: 1
allele frequency: 8.645732466454558e-6
allele num: 115664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-40T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-40T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11281
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17893
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5400
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9948
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-20803339-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803339
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803340
    reference: chr 12
allele count: 2
allele frequency: 1.729146493290912e-5
allele num: 115664
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-39dupA
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-39dupA
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9492
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5400
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 904
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17893
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 648
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3318
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 852
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

12-20803346-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803346
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803346
    reference: chr 12
allele count: 2
allele frequency: 1.724375775969099e-5
allele num: 115984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-33G>A
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-33G>A
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 324
  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 924
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 2.004409701342955e-4
  allele num: 9978
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

12-20803349-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803349
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803349
    reference: chr 12
allele count: 1
allele frequency: 8.59963537546008e-6
allele num: 116284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-30A>G
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-30A>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9998
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

12-20803352-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803352
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803352
    reference: chr 12
allele count: 1
allele frequency: 8.589884551951622e-6
allele num: 116416
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-27C>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-27C>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 14027
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6594
  num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

12-20803352-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803352
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803350
    reference: chr 12
allele count: 1
allele frequency: 8.589884551951622e-6
allele num: 116416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-22_2067-21delAT
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-22_2770-21delAT
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8568
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: CAT
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum

12-20803353-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803353
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803353
    reference: chr 12
allele count: 3
allele frequency: 2.571090656656554e-5
allele num: 116682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-26A>G
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-26A>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 3.058197498394446e-5
  allele num: 65398
  num of homozygotes: 1
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

12-20803353-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803353
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803353
    reference: chr 12
allele count: 2
allele frequency: 1.714060437771036e-5
allele num: 116682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-26A>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-26A>T
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17960
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4498
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8574
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-20803355-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803355
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803355
    reference: chr 12
allele count: 3
allele frequency: 2.568053415511043e-5
allele num: 116820
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-24A>G
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-24A>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14490
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5725
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8582
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

12-20803356-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803356
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803356
    reference: chr 12
allele count: 1
allele frequency: 8.554027236022719e-6
allele num: 116904
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-23T>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-23T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17964
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8584
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-20803357-ATTAACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803357
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803351
    reference: chr 12
allele count: 1
allele frequency: 8.547008547008548e-6
allele num: 117000
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-18_2770-13delACTTTA
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-18_2067-13delACTTTA
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4724
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11486
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: ATTAACT
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/12-20803366-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803366
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803366
    reference: chr 12
allele count: 5
allele frequency: 4.233771952107571e-5
allele num: 118098
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-13A>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-13A>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 14510
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-20803374-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803374
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803374
    reference: chr 12
allele count: 3
allele frequency: 2.514879704920781e-5
allele num: 119290
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2770-5A>C
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2067-5A>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
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hgvs: c.2770-5A>C
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8630
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

12-20803384-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803384
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803384
    reference: chr 12
allele count: 1
allele frequency: 8.319052293562717e-6
allele num: 120206
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2775T>G
  hgvsp: ENSP00000351957.3:p.Asn925Lys
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2072T>G
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
hgvs: p.Asn925Lys
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8638
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

12-20803417-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803417
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803417
    reference: chr 12
allele count: 5
allele frequency: 4.126502046745016e-5
allele num: 121168
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2808T>C
  hgvsp: ENST00000359062.3:c.2808T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2105T>C
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
hgvs: p.Asn936Asn
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66606
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

12-20803429-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20803429
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 20803429
    reference: chr 12
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172572
  ensembl transcript: ENST00000544307
  gene symbol: PDE3A
  hgvsc: ENST00000544307.1:n.2117G>T
  variant of: http://identifiers.org/hgnc/8778
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172572
  ensembl protein: ENSP00000351957
  ensembl transcript: ENST00000359062
  gene symbol: PDE3A
  hgvsc: ENST00000359062.3:c.2820G>T
  hgvsp: ENST00000359062.3:c.2820G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8778
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu940Leu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 6.066488716330988e-5
  allele num: 16484
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.659976458515679e-4
allele num: 66266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.352e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.21e-1

QD
type: SiteQuality
SIO_000300: 5.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.847e1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 2.299154e6

South Asian
type: Population
allele count: 3
allele frequency: 1.832396774981676e-4
allele num: 16372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527743827914935e-5
allele num: 65456
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 2.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.133e0

MQ
type: SiteQuality
SIO_000300: 5.877e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

QD
type: SiteQuality
SIO_000300: 2.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 2.270315e6

VQSLOD
type: SiteQuality
SIO_000300: -3.43e0

African
type: Population
allele count: 4
allele frequency: 4.060913705583756e-4
allele num: 9850
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.329587099926704e-4
allele num: 16372
num of homozygotes: 0

Latino
type: Population
allele count: 20
allele frequency: 1.749169144656288e-3
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 52
allele frequency: 7.944267905157663e-4
allele num: 65456
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.432664756446991e-3
allele num: 8376
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

VQSLOD
type: SiteQuality
SIO_000300: -3.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 2.270315e6

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQ
type: SiteQuality
SIO_000300: 5.877e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 2.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.133e0

European (Non-Finnish)
type: Population
allele count: 57
allele frequency: 8.675534991324465e-4
allele num: 65702
num of homozygotes: 1

Latino
type: Population
allele count: 17
allele frequency: 1.482644339787197e-3
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.015640869388584e-4
allele num: 9846
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.155296120637237e-3
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.319e1

MQ
type: SiteQuality
SIO_000300: 5.881e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.971e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 2.264109e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530268715186387e-5
allele num: 65348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.061e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

DP
type: SiteQuality
SIO_000300: 2.252004e6

MQ
type: SiteQuality
SIO_000300: 5.789e1

QD
type: SiteQuality
SIO_000300: 5.41e0

East Asian
type: Population
allele count: 1
allele frequency: 1.205400192864031e-4
allele num: 8296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.789e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.061e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.252004e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

QD
type: SiteQuality
SIO_000300: 5.41e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.165358318561661e-5
allele num: 63184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15338
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.240605e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 4.43e0

QD
type: SiteQuality
SIO_000300: 4.62e0

MQ
type: SiteQuality
SIO_000300: 5.782e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

MQRankSum
type: SiteQuality
SIO_000300: -2.354e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58267915928083e-5
allele num: 63184
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.782e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 4.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.354e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

DP
type: SiteQuality
SIO_000300: 2.240605e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

QD
type: SiteQuality
SIO_000300: 4.62e0

East Asian
type: Population
allele count: 13
allele frequency: 1.940877873992237e-3
allele num: 6698
num of homozygotes: 0

Latino
type: Population
allele count: 28
allele frequency: 2.807298977341087e-3
allele num: 9974
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.319261213720317e-3
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.86251269895022e-3
allele num: 5906
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 8.439836026042923e-4
allele num: 8294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 86
allele frequency: 1.563806960759356e-3
allele num: 54994
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.052e0

MQ
type: SiteQuality
SIO_000300: 5.721e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

DP
type: SiteQuality
SIO_000300: 2.209219e6

MQRankSum
type: SiteQuality
SIO_000300: -2.244e0

FS
type: SiteQuality
SIO_000300: 4.357e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.882e-1

QD
type: SiteQuality
SIO_000300: 4.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

East Asian
type: Population
allele count: 3
allele frequency: 4.478948939982084e-4
allele num: 6698
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 9.645526886906198e-4
allele num: 8294
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 1.325820351342393e-3
allele num: 12068
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.319261213720317e-3
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 7.018247443352717e-4
allele num: 9974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 6.182492635560243e-4
allele num: 54994
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.357e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.244e0

DP
type: SiteQuality
SIO_000300: 2.209219e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.882e-1

MQ
type: SiteQuality
SIO_000300: 5.721e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 4.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.052e0

African
type: Population
allele count: 2
allele frequency: 2.411381721726549e-4
allele num: 8294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.727570280394225e-4
allele num: 54994
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 2.209219e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 4.357e0

MQRankSum
type: SiteQuality
SIO_000300: -2.244e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.882e-1

QD
type: SiteQuality
SIO_000300: 4.01e0

MQ
type: SiteQuality
SIO_000300: 5.721e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.052e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.818380186929483e-5
allele num: 54994
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.357e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.882e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.721e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.052e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 4.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.244e0

DP
type: SiteQuality
SIO_000300: 2.209219e6

European (Non-Finnish)
type: Population
allele count: 73
allele frequency: 1.327417536458523e-3
allele num: 54994
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.704431521957088e-3
allele num: 9974
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 9.645526886906198e-4
allele num: 8294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.86251269895022e-3
allele num: 5906
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.657275439177991e-3
allele num: 12068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 4.01e0

FS
type: SiteQuality
SIO_000300: 4.357e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.052e0

DP
type: SiteQuality
SIO_000300: 2.209219e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.721e1

MQRankSum
type: SiteQuality
SIO_000300: -2.244e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.882e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6698
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.485913158766987e-4
allele num: 12068
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.411381721726549e-4
allele num: 8294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.000218205622431e-4
allele num: 54994
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.005213555243633e-4
allele num: 9974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.01e0

MQ
type: SiteQuality
SIO_000300: 5.721e1

FS
type: SiteQuality
SIO_000300: 4.357e0

DP
type: SiteQuality
SIO_000300: 2.209219e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.882e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.052e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.244e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.459427904261529e-4
allele num: 6852
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e-1

MQ
type: SiteQuality
SIO_000300: 5.446e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

FS
type: SiteQuality
SIO_000300: 6.812e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.121e0

QD
type: SiteQuality
SIO_000300: 3.65e0

DP
type: SiteQuality
SIO_000300: 2.173011e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.01e-1

Latino
type: Population
allele count: 2
allele frequency: 1.954652071931196e-4
allele num: 10232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.594896331738437e-4
allele num: 6270
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.378283712784588e-4
allele num: 6852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.519617018213232e-4
allele num: 55564
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.65e0

MQRankSum
type: SiteQuality
SIO_000300: -1.522e0

DP
type: SiteQuality
SIO_000300: 2.173011e6

VQSLOD
type: SiteQuality
SIO_000300: 2.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.121e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.446e1

FS
type: SiteQuality
SIO_000300: 6.812e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.01e-1

Other
type: Population
allele count: 5
allele frequency: 2.688172043010753e-2
allele num: 186
num of homozygotes: 0

South Asian
type: Population
allele count: 169
allele frequency: 6.204111600587372e-2
allele num: 2724
num of homozygotes: 4

East Asian
type: Population
allele count: 38
allele frequency: 3.41726618705036e-2
allele num: 1112
num of homozygotes: 2

African
type: Population
allele count: 27
allele frequency: 1.31578947368421e-2
allele num: 2052
num of homozygotes: 0

Latino
type: Population
allele count: 48
allele frequency: 2.257761053621825e-2
allele num: 2126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 223
allele frequency: 1.640670982931136e-2
allele num: 13592
num of homozygotes: 4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 1.966686e6

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.188e-1

QD
type: SiteQuality
SIO_000300: 2.12e0

MQRankSum
type: SiteQuality
SIO_000300: -2.634e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

African
type: Population
allele count: 5
allele frequency: 2.436647173489279e-3
allele num: 2052
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 4.496402877697842e-3
allele num: 1112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.41643059490085e-3
allele num: 1412
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.703668861712136e-4
allele num: 2126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 1.912889935256033e-3
allele num: 13592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.453e1

MQRankSum
type: SiteQuality
SIO_000300: -2.634e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.188e-1

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 1.966686e6

African
type: Population
allele count: 4
allele frequency: 1.949317738791423e-3
allele num: 2052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 8.828722778104767e-4
allele num: 13592
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 9.407337723424271e-4
allele num: 2126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1412
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.966686e6

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.188e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

MQRankSum
type: SiteQuality
SIO_000300: -2.634e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 2.8328611898017e-3
allele num: 1412
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 9.407337723424271e-4
allele num: 2126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 5.150088287227781e-4
allele num: 13592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.966686e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.188e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

QD
type: SiteQuality
SIO_000300: 2.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -2.634e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

East Asian
type: Population
allele count: 247
allele frequency: 2.221223021582734e-1
allele num: 1112
num of homozygotes: 0

African
type: Population
allele count: 250
allele frequency: 1.218323586744639e-1
allele num: 2052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 296
allele frequency: 2.096317280453258e-1
allele num: 1412
num of homozygotes: 0

Other
type: Population
allele count: 32
allele frequency: 1.720430107526882e-1
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1769
allele frequency: 1.301500882872278e-1
allele num: 13592
num of homozygotes: 0

South Asian
type: Population
allele count: 621
allele frequency: 2.279735682819383e-1
allele num: 2724
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.188e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.634e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 1.966686e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.471453796350795e-4
allele num: 13592
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.703668861712136e-4
allele num: 2126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.188e-1

DP
type: SiteQuality
SIO_000300: 1.966686e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

QD
type: SiteQuality
SIO_000300: 2.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -2.634e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

FS
type: SiteQuality
SIO_000300: 9.518000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.453e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.771165426850868e-4
allele num: 22584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3034
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.81e0

DP
type: SiteQuality
SIO_000300: 1.955389e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.336e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.41e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

MQ
type: SiteQuality
SIO_000300: 5.557e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.855827134254339e-5
allele num: 22584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.336e0

MQ
type: SiteQuality
SIO_000300: 5.557e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 1.955389e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.328e1

FS
type: SiteQuality
SIO_000300: 2.694e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 1.148e1

DP
type: SiteQuality
SIO_000300: 1.938858e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.18464560484531e-5
allele num: 24436
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.694e0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQ
type: SiteQuality
SIO_000300: 5.328e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.31e-1

QD
type: SiteQuality
SIO_000300: 1.148e1

DP
type: SiteQuality
SIO_000300: 1.938858e6

European (Finnish)
type: Population
allele count: 4
allele frequency: 1.263423878711308e-3
allele num: 3166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 340
allele frequency: 1.454234388366125e-2
allele num: 23380
num of homozygotes: 6

East Asian
type: Population
allele count: 26
allele frequency: 1.229895931882687e-2
allele num: 2114
num of homozygotes: 1

African
type: Population
allele count: 19
allele frequency: 4.051172707889125e-3
allele num: 4690
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 7.936507936507936e-3
allele num: 378
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 5.013077593722755e-3
allele num: 4588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

MQ
type: SiteQuality
SIO_000300: 5.376e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 1.910542e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.47e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.52e0

East Asian
type: Population
allele count: 1
allele frequency: 4.730368968779565e-4
allele num: 2114
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.359197907585005e-4
allele num: 4588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.135847342117219e-4
allele num: 8804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.158559696778269e-4
allele num: 3166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

QD
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

DP
type: SiteQuality
SIO_000300: 1.910542e6

MQ
type: SiteQuality
SIO_000300: 5.376e1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.47e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.175917215428034e-4
allele num: 8504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59498
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.413e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.468133e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.08e-1

QD
type: SiteQuality
SIO_000300: 3.257e1

South Asian
type: Population
allele count: 14825
allele frequency: 9.497117232543242e-1
allele num: 15610
num of homozygotes: 7033

East Asian
type: Population
allele count: 7482
allele frequency: 9.957412829385148e-1
allele num: 7514
num of homozygotes: 3725

European (Finnish)
type: Population
allele count: 6086
allele frequency: 9.548164417947913e-1
allele num: 6374
num of homozygotes: 2902

Other
type: Population
allele count: 780
allele frequency: 9.285714285714286e-1
allele num: 840
num of homozygotes: 362

European (Non-Finnish)
type: Population
allele count: 55430
allele frequency: 9.316279538808027e-1
allele num: 59498
num of homozygotes: 25743

African
type: Population
allele count: 6933
allele frequency: 8.152634054562559e-1
allele num: 8504
num of homozygotes: 2742

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.257e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

DP
type: SiteQuality
SIO_000300: 1.468133e6

MQ
type: SiteQuality
SIO_000300: 5.413e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

African
type: Population
allele count: 1
allele frequency: 1.747030048916841e-4
allele num: 5724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11600
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.295e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

FS
type: SiteQuality
SIO_000300: 1.197e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

QD
type: SiteQuality
SIO_000300: 1.003e1

DP
type: SiteQuality
SIO_000300: 1.531219e6

VQSLOD
type: SiteQuality
SIO_000300: -8.925999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.53e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.663967179924343e-5
allele num: 37538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5724
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.53e-1

MQ
type: SiteQuality
SIO_000300: 5.295e1

MQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

FS
type: SiteQuality
SIO_000300: 1.197e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

QD
type: SiteQuality
SIO_000300: 1.003e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.05e-2

DP
type: SiteQuality
SIO_000300: 1.531219e6

VQSLOD
type: SiteQuality
SIO_000300: -8.925999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

South Asian
type: Population
allele count: 1
allele frequency: 7.477194556602363e-5
allele num: 13374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.556e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

DP
type: SiteQuality
SIO_000300: 1.502346e6

MQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.123e1

QD
type: SiteQuality
SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13286
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
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DP
type: SiteQuality
SIO_000300: 1.503037e6

VQSLOD
type: SiteQuality
SIO_000300: -1.633e-1

QD
type: SiteQuality
SIO_000300: 2.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.303e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.418262720061907e-5
allele num: 41352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7244
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.123476848090982e-5
allele num: 12310
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MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.404e1

DP
type: SiteQuality
SIO_000300: 1.493625e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 1.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.33e-1

QD
type: SiteQuality
SIO_000300: 8.35e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.418262720061907e-5
allele num: 41352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.111842105263158e-4
allele num: 4864
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 1.659e0

MQ
type: SiteQuality
SIO_000300: 5.404e1

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.33e-1

QD
type: SiteQuality
SIO_000300: 8.35e0

DP
type: SiteQuality
SIO_000300: 1.493625e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

European (Non-Finnish)
type: Population
allele count: 1970
allele frequency: 2.164359481432652e-1
allele num: 9102
num of homozygotes: 159

Latino
type: Population
allele count: 587
allele frequency: 2.523645743766122e-1
allele num: 2326
num of homozygotes: 45

South Asian
type: Population
allele count: 566
allele frequency: 2.047756874095514e-1
allele num: 2764
num of homozygotes: 53

European (Finnish)
type: Population
allele count: 392
allele frequency: 2.582345191040843e-1
allele num: 1518
num of homozygotes: 23

East Asian
type: Population
allele count: 254
allele frequency: 2.803532008830022e-1
allele num: 906
num of homozygotes: 21

African
type: Population
allele count: 454
allele frequency: 2.425213675213675e-1
allele num: 1872
num of homozygotes: 31

QD
type: SiteQuality
SIO_000300: 9.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 1.068683e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.455e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.118e1

East Asian
type: Population
allele count: 129
allele frequency: 1.423841059602649e-1
allele num: 906
num of homozygotes: 16

Other
type: Population
allele count: 17
allele frequency: 1.103896103896104e-1
allele num: 154
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African
type: Population
allele count: 210
allele frequency: 1.121794871794872e-1
allele num: 1872
num of homozygotes: 8

European (Finnish)
type: Population
allele count: 163
allele frequency: 1.073781291172596e-1
allele num: 1518
num of homozygotes: 13

South Asian
type: Population
allele count: 460
allele frequency: 1.664254703328509e-1
allele num: 2764
num of homozygotes: 61

European (Non-Finnish)
type: Population
allele count: 1138
allele frequency: 1.250274664908811e-1
allele num: 9102
num of homozygotes: 90

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.455e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

MQ
type: SiteQuality
SIO_000300: 5.118e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 1.068683e6

QD
type: SiteQuality
SIO_000300: 9.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

South Asian
type: Population
allele count: 107
allele frequency: 3.871201157742402e-2
allele num: 2764
num of homozygotes: 10

African
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allele count: 92
allele frequency: 4.914529914529914e-2
allele num: 1872
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European (Non-Finnish)
type: Population
allele count: 383
allele frequency: 4.207866402988354e-2
allele num: 9102
num of homozygotes: 35

European (Finnish)
type: Population
allele count: 53
allele frequency: 3.491436100131752e-2
allele num: 1518
num of homozygotes: 7

Other
type: Population
allele count: 4
allele frequency: 2.597402597402598e-2
allele num: 154
num of homozygotes: 0

East Asian
type: Population
allele count: 46
allele frequency: 5.077262693156733e-2
allele num: 906
num of homozygotes: 5

MQ
type: SiteQuality
SIO_000300: 5.118e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 9.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.455e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

DP
type: SiteQuality
SIO_000300: 1.068683e6

African
type: Population
allele count: 65
allele frequency: 3.472222222222222e-2
allele num: 1872
num of homozygotes: 0

South Asian
type: Population
allele count: 92
allele frequency: 3.328509406657019e-2
allele num: 2764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 47
allele frequency: 3.096179183135705e-2
allele num: 1518
num of homozygotes: 0

East Asian
type: Population
allele count: 53
allele frequency: 5.849889624724062e-2
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 109
allele frequency: 4.68615649183147e-2
allele num: 2326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 385
allele frequency: 4.229839595693254e-2
allele num: 9102
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 1.068683e6

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.455e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.118e1

QD
type: SiteQuality
SIO_000300: 9.34e0

East Asian
type: Population
allele count: 41
allele frequency: 4.525386313465784e-2
allele num: 906
num of homozygotes: 1

Latino
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allele count: 148
allele frequency: 6.362854686156492e-2
allele num: 2326
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African
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allele count: 200
allele frequency: 1.068376068376068e-1
allele num: 1872
num of homozygotes: 2

Other
type: Population
allele count: 19
allele frequency: 1.233766233766234e-1
allele num: 154
num of homozygotes: 0

South Asian
type: Population
allele count: 278
allele frequency: 1.005788712011577e-1
allele num: 2764
num of homozygotes: 7

European (Finnish)
type: Population
allele count: 165
allele frequency: 1.08695652173913e-1
allele num: 1518
num of homozygotes: 7

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 9.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.068683e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.118e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.455e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

East Asian
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allele count: 8
allele frequency: 8.830022075055188e-3
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African
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allele count: 20
allele frequency: 1.068376068376068e-2
allele num: 1872
num of homozygotes: 3

Latino
type: Population
allele count: 6
allele frequency: 2.579535683576956e-3
allele num: 2326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 8.321273516642547e-3
allele num: 2764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 6.701823774994507e-3
allele num: 9102
num of homozygotes: 4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.455e-1

QD
type: SiteQuality
SIO_000300: 9.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 1.068683e6

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

MQ
type: SiteQuality
SIO_000300: 5.118e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2752
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.016949152542373e-3
allele num: 2950
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.379123e6

MQ
type: SiteQuality
SIO_000300: 5.125e1

QD
type: SiteQuality
SIO_000300: 1.655e1

FS
type: SiteQuality
SIO_000300: 3.148e0

MQRankSum
type: SiteQuality
SIO_000300: -7.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.788e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.63e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.520630897056752e-5
allele num: 28404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

FS
type: SiteQuality
SIO_000300: 2.769e0

VQSLOD
type: SiteQuality
SIO_000300: 9.18e-1

MQ
type: SiteQuality
SIO_000300: 4.995e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.02e-2

QD
type: SiteQuality
SIO_000300: 1.262e1

DP
type: SiteQuality
SIO_000300: 1.204313e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.424595092619533e-5
allele num: 41244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5758
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 1.088264e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.08e-2

QD
type: SiteQuality
SIO_000300: 1.175e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.142e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.011639321273313e-5
allele num: 14262
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.32e1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

FS
type: SiteQuality
SIO_000300: 2.821e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.073616e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-1

Latino
type: Population
allele count: 178
allele frequency: 1.826765188834154e-2
allele num: 9744
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5670
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.32e1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

DP
type: SiteQuality
SIO_000300: 1.073616e6

FS
type: SiteQuality
SIO_000300: 2.821e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14456
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.93e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.194e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQ
type: SiteQuality
SIO_000300: 5.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.070424e6

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.158615032595087e-5
allele num: 46326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.030044660982542e-4
allele num: 9852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

QD
type: SiteQuality
SIO_000300: 1.935e1

VQSLOD
type: SiteQuality
SIO_000300: 4.19e0

DP
type: SiteQuality
SIO_000300: 1.066117e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.48e-2

MQ
type: SiteQuality
SIO_000300: 5.359e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14578
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.030044660982542e-4
allele num: 9852
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.359e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

VQSLOD
type: SiteQuality
SIO_000300: 4.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.48e-2

DP
type: SiteQuality
SIO_000300: 1.066117e6

QD
type: SiteQuality
SIO_000300: 1.935e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.269490222867389e-5
allele num: 46844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

FS
type: SiteQuality
SIO_000300: 6.929e0

QD
type: SiteQuality
SIO_000300: 2.335e1

VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

MQ
type: SiteQuality
SIO_000300: 5.159e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

DP
type: SiteQuality
SIO_000300: 1.062946e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14632
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.929e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.335e1

VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

MQ
type: SiteQuality
SIO_000300: 5.159e1

DP
type: SiteQuality
SIO_000300: 1.062946e6

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.049635e6

MQ
type: SiteQuality
SIO_000300: 4.85e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.84e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 2.628e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.742767514813524e-4
allele num: 5738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 2.628e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.84e-2

DP
type: SiteQuality
SIO_000300: 1.049635e6

MQ
type: SiteQuality
SIO_000300: 4.85e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5546
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.799944001119978e-4
allele num: 14286
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5846
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-2

DP
type: SiteQuality
SIO_000300: 1.026346e6

MQ
type: SiteQuality
SIO_000300: 4.983e1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.581e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 3.427e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.013302e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.447e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 6.21e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.004083e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

MQ
type: SiteQuality
SIO_000300: 4.523e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.95e-2

QD
type: SiteQuality
SIO_000300: 3.019e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5392
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4744
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.85e-2

DP
type: SiteQuality
SIO_000300: 9.69785e5

QD
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 4.45e1

Latino
type: Population
allele count: 1
allele frequency: 8.738203425375742e-5
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 287
allele frequency: 4.414433814255391e-3
allele num: 65014
num of homozygotes: 2

Other
type: Population
allele count: 1
allele frequency: 1.179245283018868e-3
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.215066828675577e-3
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13162
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.970417e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

QD
type: SiteQuality
SIO_000300: 1.612e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

East Asian
type: Population
allele count: 1
allele frequency: 1.177578897786152e-4
allele num: 8492
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13154
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.094e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.865e0

MQRankSum
type: SiteQuality
SIO_000300: -6.55e-1

FS
type: SiteQuality
SIO_000300: 5.943e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.775e0

DP
type: SiteQuality
SIO_000300: 1.981695e6

QD
type: SiteQuality
SIO_000300: 9.109999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.529411764705882e-3
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65086
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e0

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

DP
type: SiteQuality
SIO_000300: 1.988113e6

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.44e-1

QD
type: SiteQuality
SIO_000300: 1.564e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536287101333497e-5
allele num: 65092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.057e1

FS
type: SiteQuality
SIO_000300: 3.957e0

DP
type: SiteQuality
SIO_000300: 1.993006e6

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.746114894360049e-4
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.993006e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 3.957e0

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.057e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65174
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13378
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.204e0

FS
type: SiteQuality
SIO_000300: 1.355e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.015477e6

QD
type: SiteQuality
SIO_000300: 1.229e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13522
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531909678605349e-5
allele num: 65278
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.4e0

DP
type: SiteQuality
SIO_000300: 2.024807e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

QD
type: SiteQuality
SIO_000300: 1.581e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13558
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65326
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
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DP
type: SiteQuality
SIO_000300: 2.031237e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: -5.16e-1

QD
type: SiteQuality
SIO_000300: 1.06e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 5.193e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
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Other
type: Population
allele count: 0
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allele num: 866
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South Asian
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allele count: 1
allele frequency: 7.375719132615431e-5
allele num: 13558
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.06e1

MQRankSum
type: SiteQuality
SIO_000300: -5.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 5.193e0

DP
type: SiteQuality
SIO_000300: 2.031237e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
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East Asian
type: Population
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
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South Asian
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allele count: 1
allele frequency: 7.292882147024503e-5
allele num: 13712
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VQSLOD
type: SiteQuality
SIO_000300: -6.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 2.033527e6

FS
type: SiteQuality
SIO_000300: 6.926e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.34e-2

QD
type: SiteQuality
SIO_000300: 2.088e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.33e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
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African
type: Population
allele count: 2
allele frequency: 1.990445859872612e-4
allele num: 10048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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allele num: 874
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

DP
type: SiteQuality
SIO_000300: 2.033527e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.33e-1

QD
type: SiteQuality
SIO_000300: 2.088e1

FS
type: SiteQuality
SIO_000300: 6.926e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.34e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.25e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.585473220836391e-5
allele num: 65424
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South Asian
type: Population
allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
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VQSLOD
type: SiteQuality
SIO_000300: -1.052e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.7e1

MQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

DP
type: SiteQuality
SIO_000300: 2.03672e6

QD
type: SiteQuality
SIO_000300: 1.747e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.953e0

FS
type: SiteQuality
SIO_000300: 4.201e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.227522405319457e-5
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65444
num of homozygotes: 0

Other
type: Population
allele count: 0
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African
type: Population
allele count: 0
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allele num: 10084
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

DP
type: SiteQuality
SIO_000300: 2.038211e6

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

QD
type: SiteQuality
SIO_000300: 1.573e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

South Asian
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
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allele count: 0
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African
type: Population
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527510463446675e-5
allele num: 65466
num of homozygotes: 0

Other
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allele count: 0
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allele num: 874
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
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MQRankSum
type: SiteQuality
SIO_000300: -4.141e0

FS
type: SiteQuality
SIO_000300: 7.704e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.11e-1

DP
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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Latino
type: Population
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allele frequency: 8.686587908269631e-5
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65786
num of homozygotes: 0

Other
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East Asian
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allele frequency: 4.650081376424087e-4
allele num: 8602
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MQ
type: SiteQuality
SIO_000300: 5.916e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 2.057741e6

FS
type: SiteQuality
SIO_000300: 4.424e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
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African
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.539264639128461e-5
allele num: 66090
num of homozygotes: 0

Latino
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MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 7.11e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

DP
type: SiteQuality
SIO_000300: 2.073666e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507613447911955e-5
allele num: 66330
num of homozygotes: 0

Other
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Latino
type: Population
allele count: 0
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African
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allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
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VQSLOD
type: SiteQuality
SIO_000300: 8.37e-1

FS
type: SiteQuality
SIO_000300: 3.464e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.319e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

DP
type: SiteQuality
SIO_000300: 2.08376e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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South Asian
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allele count: 4
allele frequency: 2.432794063982484e-4
allele num: 16442
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Other
type: Population
allele count: 0
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VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

FS
type: SiteQuality
SIO_000300: 3.925e0

QD
type: SiteQuality
SIO_000300: 1.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

DP
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SIO_000300: 2.095668e6

Latino
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allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.905e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.626e0

FS
type: SiteQuality
SIO_000300: 4.325e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4